Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_M03
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61950-4|AAC24287.2| 303|Caenorhabditis elegans Hypothetical pr... 60 2e-09
L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical ... 44 2e-04
U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical p... 42 6e-04
AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical ... 42 8e-04
U64847-6|AAB04875.1| 380|Caenorhabditis elegans Hypothetical pr... 29 3.5
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 29 4.6
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 29 4.6
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 29 4.6
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 29 4.6
Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 29 6.1
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 29 6.1
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 29 6.1
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 28 8.1
U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical pr... 28 8.1
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 28 8.1
>U61950-4|AAC24287.2| 303|Caenorhabditis elegans Hypothetical
protein C45E5.1 protein.
Length = 303
Score = 60.1 bits (139), Expect = 2e-09
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Frame = +1
Query: 184 KFLDSFDHVLSDCDGVIWTQD-SLPRVGEFFKQ-MKKRGKTVNFVSNNSLRSRANYEAQF 357
+ L +FD + D DGV+WT D +P E+ + K+V +NNS ++ Y +
Sbjct: 10 QLLSNFDTFVFDADGVLWTGDIPIPGAAEWINTLLDDPEKSVFITTNNSTKTLEQYMKKV 69
Query: 358 KAASIDN-GFESLIIPSIAVAEYLK--SVTF-NKTVYCVTCTETKRVL-EAHGFKC-KEG 519
K G E+L+ P+I + +Y K S F N+ +Y + K+ L E G KC G
Sbjct: 70 KKMRFGRLGRENLLSPTIVLCDYFKQNSDKFENQYIYLIGVENLKKSLEEGGGVKCFGTG 129
Query: 520 PDLGPEYY-GEYIQYLEDDEEI-GAVVFDSDFKINLPKMYLSHN 645
PD Y G++I ++ +I AVV D + PK+ + N
Sbjct: 130 PDHKDNYTDGDFINEVDVKSKIPKAVVVSFDSHFSYPKLMKAAN 173
>L14710-4|AAK84537.3| 526|Caenorhabditis elegans Hypothetical
protein K02D10.1a protein.
Length = 526
Score = 54.0 bits (124), Expect = 1e-07
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Frame = +1
Query: 181 HKFLDSFDHVLSDCDGVIWTQD-SLPRVGEFFK-QMKKRGKTVNFVSNNSLRSRANYEAQ 354
++ L ++D L D DGV+WT D +P E+ ++ K V ++NNS ++ Y +
Sbjct: 9 NELLANYDTFLFDADGVLWTGDIPVPGAIEWINLLLEDPSKKVFVLTNNSTKTLEQYMKK 68
Query: 355 FKAASIDN-GFESLIIPSIAVAEYLKSVT---FNKTVYCVTCTETKRVLEAH-GFKC-KE 516
+ + G ++I P+I +A+YLKS + VY + K LE G KC
Sbjct: 69 IEKLGFGHLGRNNVISPAIVLADYLKSNADKFSGEYVYLIGTENLKATLENDGGVKCFGT 128
Query: 517 GPD-LGPEYYGEYIQYLEDDEEIGAVVFDSDFKINLPKMYLSHN 645
GPD + G++I ++ AVV D + PK+ + N
Sbjct: 129 GPDSIRDHTDGDFIHKVDMSIAPKAVVCSYDAHFSYPKIMKASN 172
>AF039035-3|AAB94163.1| 349|Caenorhabditis elegans Hypothetical
protein C53A3.2 protein.
Length = 349
Score = 44.0 bits (99), Expect = 2e-04
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Frame = +1
Query: 157 LDLSVEDLHKFLDSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNSLRS 333
L L + K + + D + D DGV+W +S +P + K K + ++NN+ +S
Sbjct: 42 LPLDPKSFSKVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKS 101
Query: 334 RANYE---AQFKAASIDNGFESLIIPSIAVAEYLKSVTFN-KTVYCVTCTETKRVLEAHG 501
RA Y A+ S +L+ P+ VA+ L + K VY + + ++ G
Sbjct: 102 RAVYAKKLAKLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELG 161
Query: 502 FK-CKEGPDLGPEY---YGEYIQYLEDDEEIGAVVFDSDFKINLPKMYLSHN 645
+ GP+ + G ++ ++ +E +GAVV + + KM + N
Sbjct: 162 IEYFGHGPEKKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYVKMMKASN 213
>U97002-10|AAB52266.1| 322|Caenorhabditis elegans Hypothetical
protein K09H11.7 protein.
Length = 322
Score = 41.9 bits (94), Expect = 6e-04
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Frame = +1
Query: 184 KFLDSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNSLRSRANYE---A 351
K + + D + D DGV+W +S +P + K K + ++NN+ +SRA Y A
Sbjct: 24 KVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLA 83
Query: 352 QFKAASIDNGFESLIIPSIAVAEYLKSVTFN-KTVYCVTCTETKRVLEAHGFK-CKEGPD 525
+ S +L+ P+ VA+ L + K VY + + ++ G + GP+
Sbjct: 84 KLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFGHGPE 143
Query: 526 LGPEY---YGEYIQYLEDDEEIGAVVFDSDFKINLPKMYLSHN 645
+ G ++ ++ +E +GAVV + + KM + N
Sbjct: 144 KKQDEADGSGAFMYDIKLEENVGAVVVGYEKHFDYVKMMKASN 186
>AF016421-1|AAC25793.1| 335|Caenorhabditis elegans Hypothetical
protein F44E7.2 protein.
Length = 335
Score = 41.5 bits (93), Expect = 8e-04
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 6/152 (3%)
Frame = +1
Query: 184 KFLDSFDHVLSDCDGVIWTQDS-LPRVGEFFKQMKKRGKTVNFVSNNSLRSRANYE---A 351
K + + D + D DGV+W +S +P + K K + ++NN+ +SRA Y A
Sbjct: 41 KVMKTIDTFIFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLA 100
Query: 352 QFKAASIDNGFESLIIPSIAVAEYLKSVTFN-KTVYCVTCTETKRVLEAHGFKCKEGPDL 528
+ S +L+ P+ VA+ L + K VY ++ G + E +L
Sbjct: 101 KLGYNSSKMNKNNLVNPAAVVADTLHRAGLDGKRVY---------LIGEQGLR-DEMDEL 150
Query: 529 GPEYYGEYIQYLEDDEE-IGAVVFDSDFKINL 621
G EY+G + +D+ + GA ++D + N+
Sbjct: 151 GIEYFGHGPEKKQDEADGSGAFMYDIKLEENV 182
>U64847-6|AAB04875.1| 380|Caenorhabditis elegans Hypothetical
protein F08F3.8 protein.
Length = 380
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 367 SIDNGFESLIIPSIAVAEYLK 429
+IDNGFE +++P + A Y K
Sbjct: 50 AIDNGFEQILVPKVCAANYDK 70
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 29.1 bits (62), Expect = 4.6
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +1
Query: 118 KVLSIMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGK 297
K+ S + ++D ED H+ S HV + +G + +D RV + ++ +K K
Sbjct: 469 KIFSRSSSPADDIIDTEEEDPHRVRSSSTHVHQNGNGQV-KKDQRKRVAQVNQRRRKGRK 527
Query: 298 TVNFVSNNSLRSRANYEAQFKAASIDNGFESLIIPSIAVAEYLKS--VTFNKTVYCVTCT 471
N+ + + F G + ++ + V + + VTF K+++ TC
Sbjct: 528 EEPSWLQNAFSTFVDV-LFFVWGYACFGLQWTLLLIVEVCQKIADIFVTFGKSLWAGTCK 586
Query: 472 ETKRVLEAHGFKC 510
+ V+ A + C
Sbjct: 587 GLRNVILAFVYLC 599
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 29.1 bits (62), Expect = 4.6
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +1
Query: 118 KVLSIMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGK 297
K+ S + ++D ED H+ S HV + +G + +D RV + ++ +K K
Sbjct: 469 KIFSRSSSPADDIIDTEEEDPHRVRSSSTHVHQNGNGQV-KKDQRKRVAQVNQRRRKGRK 527
Query: 298 TVNFVSNNSLRSRANYEAQFKAASIDNGFESLIIPSIAVAEYLKS--VTFNKTVYCVTCT 471
N+ + + F G + ++ + V + + VTF K+++ TC
Sbjct: 528 EEPSWLQNAFSTFVDV-LFFVWGYACFGLQWTLLLIVEVCQKIADIFVTFGKSLWAGTCK 586
Query: 472 ETKRVLEAHGFKC 510
+ V+ A + C
Sbjct: 587 GLRNVILAFVYLC 599
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 29.1 bits (62), Expect = 4.6
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +1
Query: 118 KVLSIMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGK 297
K+ S + ++D ED H+ S HV + +G + +D RV + ++ +K K
Sbjct: 469 KIFSRSSSPADDIIDTEEEDPHRVRSSSTHVHQNGNGQV-KKDQRKRVAQVNQRRRKGRK 527
Query: 298 TVNFVSNNSLRSRANYEAQFKAASIDNGFESLIIPSIAVAEYLKS--VTFNKTVYCVTCT 471
N+ + + F G + ++ + V + + VTF K+++ TC
Sbjct: 528 EEPSWLQNAFSTFVDV-LFFVWGYACFGLQWTLLLIVEVCQKIADIFVTFGKSLWAGTCK 586
Query: 472 ETKRVLEAHGFKC 510
+ V+ A + C
Sbjct: 587 GLRNVILAFVYLC 599
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 29.1 bits (62), Expect = 4.6
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +1
Query: 118 KVLSIMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGK 297
K+ S + ++D ED H+ S HV + +G + +D RV + ++ +K K
Sbjct: 468 KIFSRSSSPADDIIDTEEEDPHRVRSSSTHVHQNGNGQV-KKDQRKRVAQVNQRRRKGRK 526
Query: 298 TVNFVSNNSLRSRANYEAQFKAASIDNGFESLIIPSIAVAEYLKS--VTFNKTVYCVTCT 471
N+ + + F G + ++ + V + + VTF K+++ TC
Sbjct: 527 EEPSWLQNAFSTFVDV-LFFVWGYACFGLQWTLLLIVEVCQKIADIFVTFGKSLWAGTCK 585
Query: 472 ETKRVLEAHGFKC 510
+ V+ A + C
Sbjct: 586 GLRNVILAFVYLC 598
>Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical
protein C15H11.5 protein.
Length = 503
Score = 28.7 bits (61), Expect = 6.1
Identities = 23/93 (24%), Positives = 42/93 (45%)
Frame = +1
Query: 130 IMGIESKHLLDLSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGKTVNF 309
+MG ++ L V +L FL + D LSD V +T +P + G +V F
Sbjct: 87 LMGYAARTLKSSYVTNLDFFLRNLDTALSDL--VFFTNTLIPL--SIVAEATVFGSSVKF 142
Query: 310 VSNNSLRSRANYEAQFKAASIDNGFESLIIPSI 408
V+ +++ ++ Y K + + S ++P I
Sbjct: 143 VTRDNIGAKIMYLKYIKEHNQMHLLHSFLVPQI 175
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 103 QKKSLKVLSIMGIESKHLLDLSVEDLHKFLDSFDHV 210
+KKSL L + +SK+LL S + + LDS DHV
Sbjct: 338 EKKSLNQLQFLSPKSKNLLVDSFKKFAQGLDSKDHV 373
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 103 QKKSLKVLSIMGIESKHLLDLSVEDLHKFLDSFDHV 210
+KKSL L + +SK+LL S + + LDS DHV
Sbjct: 403 EKKSLNQLQFLSPKSKNLLVDSFKKFAQGLDSKDHV 438
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 103 QKKSLKVLSIMGIESKHLLDLSVEDLHKFLDSFDHV 210
+KKSL L + +SK+LL S + + LDS DHV
Sbjct: 403 EKKSLNQLQFLSPKSKNLLVDSFKKFAQGLDSKDHV 438
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 433 VTFNKTVYCVTCTETKRVLEAHGFKCKE 516
+TFN +Y C ET+R+L +G + E
Sbjct: 10 LTFNVLIYLAACQETERILANNGTEDNE 37
>U40028-2|AAY55874.1| 1200|Caenorhabditis elegans Hypothetical
protein T05A7.11 protein.
Length = 1200
Score = 28.3 bits (60), Expect = 8.1
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 520 PDLGPEYYGEYIQYLEDDEEIGAVVFDSDFKI 615
P LGP+Y G ++E ++ +++D+D ++
Sbjct: 485 PSLGPKYNGCVFAWIEQEQSYWQMMYDNDIRM 516
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 433 VTFNKTVYCVTCTETKRVLEAHGFKCKE 516
+TFN +Y C ET+R+L +G + E
Sbjct: 10 LTFNVLIYLAACQETERILANNGTEDNE 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,968,148
Number of Sequences: 27780
Number of extensions: 393836
Number of successful extensions: 1047
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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