Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_M02
(1005 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.24
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.24
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.24
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.24
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.24
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.32
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.32
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.32
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.42
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 32 0.56
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 31 1.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.7
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 1.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.3
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 2.3
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 2.3
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 3.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.9
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 9.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 9.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 9.1
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/94 (23%), Positives = 24/94 (25%), Gaps = 1/94 (1%)
Frame = -1
Query: 564 PPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXXPXXXX 385
PP G P PP PP P P + P
Sbjct: 245 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 304
Query: 384 XGAXSPPKXXXXXXPPPPXK-XPXXKKKTPPXPP 286
PP PPPP + P PP PP
Sbjct: 305 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/97 (24%), Positives = 25/97 (25%), Gaps = 2/97 (2%)
Frame = -1
Query: 573 PPPPPXXXXXXXXXXX--GXXPXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXX 400
PPPPP G P PP PPP P + P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGR-------TPGPPGMPGM 316
Query: 399 PXXXXXGAXSPPKXXXXXXPPPPXKXPXXKKKTPPXP 289
P PP PPPP PP P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -1
Query: 516 PXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXXPXXXXXGAXSPPKXXXXXXPP 337
P PP PPP P P P G PP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPP 771
Query: 336 PPXKXPXXKKKTPPXPP 286
PP P K PP PP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 582 GGXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXP 460
GG PPPPP G P PP PPP P
Sbjct: 724 GGPPPPPP--PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -3
Query: 583 GGXPPPPPXXXXXXXXXXXGXXPXXTPXXXKXXKKNPPPXPXXKKKKXXXXXPPXFXX*X 404
GG PPPPP G P P PPP P K PP
Sbjct: 740 GGPPPPPPPGGLPPIS---GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796
Query: 403 XPXXP 389
P P
Sbjct: 797 APVIP 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -1
Query: 516 PXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXXPXXXXXGAXSPPKXXXXXXPP 337
P PP PPP P P P G PP PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPP 771
Query: 336 PPXKXPXXKKKTPPXPP 286
PP P K PP PP
Sbjct: 772 PPPPPPGGFKGGPPPPP 788
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 582 GGXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXP 460
GG PPPPP G P PP PPP P
Sbjct: 724 GGPPPPPP--PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -3
Query: 583 GGXPPPPPXXXXXXXXXXXGXXPXXTPXXXKXXKKNPPPXPXXKKKKXXXXXPPXFXX*X 404
GG PPPPP G P P PPP P K PP
Sbjct: 740 GGPPPPPPPGGLPPIS---GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796
Query: 403 XPXXP 389
P P
Sbjct: 797 APVIP 801
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/94 (23%), Positives = 24/94 (25%), Gaps = 1/94 (1%)
Frame = -1
Query: 564 PPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXXPXXXX 385
PP G P PP PP P P + P
Sbjct: 255 PPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPP 314
Query: 384 XGAXSPPKXXXXXXPPPPXK-XPXXKKKTPPXPP 286
PP PPPP + P PP PP
Sbjct: 315 GRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/97 (24%), Positives = 25/97 (25%), Gaps = 2/97 (2%)
Frame = -1
Query: 573 PPPPPXXXXXXXXXXX--GXXPXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXX 400
PPPPP G P PP PPP P + P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGR-------TPGPPGMPGM 326
Query: 399 PXXXXXGAXSPPKXXXXXXPPPPXKXPXXKKKTPPXP 289
P PP PPPP PP P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -1
Query: 516 PXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXXPXXXXXGAXSPPKXXXXXXPP 337
P PP PPP P P P G PP PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPP 354
Query: 336 PPXKXPXXKKKTPPXPP 286
PP P K PP PP
Sbjct: 355 PPPPPPGGFKGGPPPPP 371
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 582 GGXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXP 460
GG PPPPP G P PP PPP P
Sbjct: 307 GGPPPPPP--PGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = -3
Query: 583 GGXPPPPPXXXXXXXXXXXGXXPXXTPXXXKXXKKNPPPXPXXKKKKXXXXXPPXFXX*X 404
GG PPPPP G P P PPP P K PP
Sbjct: 323 GGPPPPPPPGGLPPIS---GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 379
Query: 403 XPXXP 389
P P
Sbjct: 380 APVIP 384
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.32
Identities = 26/104 (25%), Positives = 30/104 (28%), Gaps = 2/104 (1%)
Frame = -1
Query: 600 KKXXXXGGXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKT--PPPXPXXKKKKXXXXX 427
K+ G PPPPP G P P +T PPP P
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS-------- 279
Query: 426 PXFXXYXXXPXXXXXGAXSPPKXXXXXXPPPPXKXPXXKKKTPP 295
P G+ PP+ PPPP P PP
Sbjct: 280 --------PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/95 (22%), Positives = 25/95 (26%)
Frame = -1
Query: 579 GXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXX 400
G PPPPP P PP P
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 312
Query: 399 PXXXXXGAXSPPKXXXXXXPPPPXKXPXXKKKTPP 295
P G SPP PPPP + +++PP
Sbjct: 313 PPPQAGG--SPPPAGTGSPPPPPRQKRQAPERSPP 345
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.32
Identities = 26/104 (25%), Positives = 30/104 (28%), Gaps = 2/104 (1%)
Frame = -1
Query: 600 KKXXXXGGXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKT--PPPXPXXKKKKXXXXX 427
K+ G PPPPP G P P +T PPP P
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS-------- 300
Query: 426 PXFXXYXXXPXXXXXGAXSPPKXXXXXXPPPPXKXPXXKKKTPP 295
P G+ PP+ PPPP P PP
Sbjct: 301 --------PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/95 (22%), Positives = 25/95 (26%)
Frame = -1
Query: 579 GXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXX 400
G PPPPP P PP P
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 333
Query: 399 PXXXXXGAXSPPKXXXXXXPPPPXKXPXXKKKTPP 295
P G SPP PPPP + +++PP
Sbjct: 334 PPPQAGG--SPPPAGTGSPPPPPRQKRQAPERSPP 366
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.32
Identities = 26/104 (25%), Positives = 30/104 (28%), Gaps = 2/104 (1%)
Frame = -1
Query: 600 KKXXXXGGXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKT--PPPXPXXKKKKXXXXX 427
K+ G PPPPP G P P +T PPP P
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS-------- 285
Query: 426 PXFXXYXXXPXXXXXGAXSPPKXXXXXXPPPPXKXPXXKKKTPP 295
P G+ PP+ PPPP P PP
Sbjct: 286 --------PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/95 (22%), Positives = 25/95 (26%)
Frame = -1
Query: 579 GXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXX 400
G PPPPP P PP P
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSL 318
Query: 399 PXXXXXGAXSPPKXXXXXXPPPPXKXPXXKKKTPP 295
P G SPP PPPP + +++PP
Sbjct: 319 PPPQAGG--SPPPAGTGSPPPPPRQKRQAPERSPP 351
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.42
Identities = 15/60 (25%), Positives = 20/60 (33%)
Frame = -1
Query: 603 PKKXXXXGGXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXPXXKKKKXXXXXP 424
P+K G PPPPP P PP ++ PP P + + P
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTP 187
Score = 31.5 bits (68), Expect = 0.98
Identities = 15/61 (24%), Positives = 19/61 (31%)
Frame = -3
Query: 604 PXKXXXXGGXPPPPPXXXXXXXXXXXGXXPXXTPXXXKXXKKNPPPXPXXKKKKXXXXXP 425
P K G PPPPP P P ++ PP P + + P
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTP 187
Query: 424 P 422
P
Sbjct: 188 P 188
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/29 (55%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 286 GGXGGGFFFXXXAFXGGGGG-XPGXXFGG 369
GG GGGF F GGGGG G FGG
Sbjct: 483 GGGGGGFGGGGGGFGGGGGGFGSGSPFGG 511
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 286 GGXGGGFFFXXXAFXGGGG-GXPGXXFGGXXCP 381
GG GGG F GGGG G G FGG P
Sbjct: 265 GGGGGGMNVGAAGFGGGGGQGYGGPQFGGQGGP 297
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = -2
Query: 941 PPPXXPXXXPXPXXXXXXXXXXPXXXXXXXXXPPXPXXXPPXPPP 807
PPP P P P P PP PP PPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/62 (25%), Positives = 16/62 (25%)
Frame = -2
Query: 992 PPPXXXXXXXXPXXXXXPPPXXPXXXPXPXXXXXXXXXXPXXXXXXXXXPPXPXXXPPXP 813
P P P PPP P P P PP PP P
Sbjct: 59 PKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
Query: 812 PP 807
PP
Sbjct: 119 PP 120
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/98 (25%), Positives = 28/98 (28%)
Frame = -1
Query: 579 GXPPPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXX 400
G PPPPP G PP K TPPP P + +
Sbjct: 72 GTPPPPPTGEPQDLSAEEGNASRRPPPPPK-GTGTPPPPPTGEPQDLSGE----GNASRR 126
Query: 399 PXXXXXGAXSPPKXXXXXXPPPPXKXPXXKKKTPPXPP 286
P G SPP P + PP PP
Sbjct: 127 PPPPPKGTGSPP--PPPTGEPQDLSGEGNASRRPPPPP 162
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 808 GGGXGGXXXGXGGXXXXXXXXXGXXXXXXXXXXGXGXXXGXXGGGXXXXXGXXXXXXXXG 987
GGG GG G GG G G G G GG G G
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGG 166
Query: 988 GG 993
GG
Sbjct: 167 GG 168
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 808 GGGXGGXXXGXGGXXXXXXXXXGXXXXXXXXXXGXGXXXGXXGGGXXXXXGXXXXXXXXG 987
GGG GG G GG G G G GGG G G
Sbjct: 118 GGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSG 177
Query: 988 GG 993
GG
Sbjct: 178 GG 179
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 808 GGGXGGXXXGXGGXXXXXXXXXGXXXXXXXXXXGXGXXXGXXGGGXXXXXGXXXXXXXXG 987
GGG GG G GG G G G G GG G G
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGG 166
Query: 988 GG 993
GG
Sbjct: 167 GG 168
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 808 GGGXGGXXXGXGGXXXXXXXXXGXXXXXXXXXXGXGXXXGXXGGGXXXXXGXXXXXXXXG 987
GGG GG G GG G G G GGG G G
Sbjct: 118 GGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSG 177
Query: 988 GG 993
GG
Sbjct: 178 GG 179
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 286 GGXGGGFFFXXXAFXGGGGGXPGXXFG 366
GG GGGF F GGGGG G G
Sbjct: 60 GGGGGGFGGGNGGFGGGGGGSGGGGGG 86
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 286 GGXGGGFFFXXXAFXGGGGGXPGXXFGG 369
GG GGG F GGGGG G GG
Sbjct: 59 GGGGGGGFGGGNGGFGGGGGGSGGGGGG 86
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = +1
Query: 235 GXXLXGXFGXXIFXEXXGGXGGGFFFXXXAFXGGGGGXPGXXFGGXXC 378
G + G +G + GG GGG GGG G G GG C
Sbjct: 86 GAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGGGGGGCQC 133
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 286 GGXGGGFFFXXXAFXGGGGGXPGXXFG 366
GG GGGF F GGGGG G G
Sbjct: 60 GGGGGGFGGGNGGFGGGGGGNYGGGGG 86
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +1
Query: 808 GGGXGGXXXGXGGXXXXXXXXXGXXXXXXXXXXGXGXXXGXXGGGXXXXXGXXXXXXXXG 987
GGG GG G GG G G G G GGG G G
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGG-GCGGGGGGCGGGGGGCGGGGGGGCGGG 181
Query: 988 GG 993
GG
Sbjct: 182 GG 183
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +1
Query: 808 GGGXGGXXXGXGGXXXXXXXXXGXXXXXXXXXXGXGXXXGXXGGGXXXXXGXXXXXXXXG 987
GGG GG G GG G G G G GGG G G
Sbjct: 29 GGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGC--GGGGGGCGGGGGGCGGGGGCG 86
Query: 988 GG 993
GG
Sbjct: 87 GG 88
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +1
Query: 808 GGGXGGXXXGXGGXXXXXXXXXGXXXXXXXXXXGXGXXXGXXGGGXXXXXGXXXXXXXXG 987
GGG GG G GG G G G G GGG G G
Sbjct: 126 GGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGG--GGGGCGGGGGGGCGGGGG 183
Query: 988 GG 993
GG
Sbjct: 184 GG 185
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/58 (25%), Positives = 16/58 (27%)
Frame = -1
Query: 570 PPPPXXXXXXXXXXXGXXPXXPPXXXKXXKKTPPPXPXXKKKKXXXXXPXFXXYXXXP 397
PPPP P PP PPP P + P F Y P
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAPVFNQYAMQP 103
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 342 PPPPXKXPXXKKKTPPXPP 286
PPPP P K PP PP
Sbjct: 160 PPPPVSVPSSKPTPPPPPP 178
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 9.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 342 PPPPXKXPXXKKKTPPXPP 286
PPPP P K PP PP
Sbjct: 160 PPPPVSVPSSKPTPPPPPP 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,554,307
Number of Sequences: 27780
Number of extensions: 214699
Number of successful extensions: 2240
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2636483976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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