Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_M01
(928 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30 pro... 108 2e-23
L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30 pro... 108 2e-23
BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30 p... 108 2e-23
BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30 p... 108 2e-23
AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30 p... 108 2e-23
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 33 1.1
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 33 1.1
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 33 1.1
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 33 1.1
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 33 1.1
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 33 1.1
>X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 108 bits (260), Expect = 2e-23
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +2
Query: 269 EIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 424
EIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 59 EIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
Score = 89.4 bits (212), Expect = 2e-17
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +1
Query: 94 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 252
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCP 53
>L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 108 bits (260), Expect = 2e-23
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +2
Query: 269 EIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 424
EIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 59 EIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
Score = 89.4 bits (212), Expect = 2e-17
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +1
Query: 94 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 252
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCP 53
>BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 108 bits (260), Expect = 2e-23
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +2
Query: 269 EIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 424
EIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 59 EIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
Score = 89.4 bits (212), Expect = 2e-17
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +1
Query: 94 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 252
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCP 53
>BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 108 bits (260), Expect = 2e-23
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +2
Query: 269 EIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 424
EIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 59 EIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
Score = 89.4 bits (212), Expect = 2e-17
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +1
Query: 94 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 252
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCP 53
>AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 108 bits (260), Expect = 2e-23
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +2
Query: 269 EIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 424
EIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 59 EIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
Score = 89.4 bits (212), Expect = 2e-17
Identities = 43/53 (81%), Positives = 47/53 (88%)
Frame = +1
Query: 94 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAP 252
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCP 53
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 33.5 bits (73), Expect = 1.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 163 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 246
+GKYC G + TLK L G +++I+ +N
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYEN 325
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 33.5 bits (73), Expect = 1.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 163 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 246
+GKYC G + TLK L G +++I+ +N
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYEN 325
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 33.5 bits (73), Expect = 1.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 163 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 246
+GKYC G + TLK L G +++I+ +N
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYEN 292
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 33.5 bits (73), Expect = 1.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 163 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 246
+GKYC G + TLK L G +++I+ +N
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYEN 325
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 33.5 bits (73), Expect = 1.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 163 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 246
+GKYC G + TLK L G +++I+ +N
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYEN 292
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 33.5 bits (73), Expect = 1.1
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 163 SGKYCLGYKQTLKTLRQGKAKLVIIAKN 246
+GKYC G + TLK L G +++I+ +N
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYEN 325
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,128,508
Number of Sequences: 237096
Number of extensions: 1423369
Number of successful extensions: 2019
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2019
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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