Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_M01
         (928 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032631-5|CAA21573.1|  113|Caenorhabditis elegans Hypothetical ...    99   4e-21
L17337-6|AAA28221.2|   44|Caenorhabditis elegans Hypothetical pr...    32   0.67 
Z81077-11|CAB03068.2|  244|Caenorhabditis elegans Hypothetical p...    29   3.6  

>AL032631-5|CAA21573.1|  113|Caenorhabditis elegans Hypothetical
           protein Y106G6H.3 protein.
          Length = 113

 Score = 99.1 bits (236), Expect = 4e-21
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = +2

Query: 269 EIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEAS 430
           EIEYYA+LAKTGVHHY+GNNIELGTACG+ +RVCTLA+TD GDSDII ++P  S
Sbjct: 59  EIEYYAMLAKTGVHHYNGNNIELGTACGRLFRVCTLAVTDAGDSDIILSVPSES 112



 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 36/54 (66%), Positives = 43/54 (79%)
 Frame = +1

Query: 94  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPP 255
           M  A K +K  E+INSRL++VMK+G+Y LGYKQTLK+L  GKAKLVIIA N PP
Sbjct: 1   MAPAAKPQKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGKAKLVIIANNTPP 54


>L17337-6|AAA28221.2|   44|Caenorhabditis elegans Hypothetical
           protein ZK686.1 protein.
          Length = 44

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = +1

Query: 151 LVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 246
           +VMK+G+Y L Y+Q LK+L    AKLVI  K+
Sbjct: 1   MVMKTGQYVL-YEQKLKSLLNENAKLVINTKH 31


>Z81077-11|CAB03068.2|  244|Caenorhabditis elegans Hypothetical
           protein F36A2.11 protein.
          Length = 244

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 24/79 (30%), Positives = 35/79 (44%)
 Frame = +3

Query: 21  HYREFLKIYFRCSXVRIH*HLRFQNGCSKETEKDHRVN*LPPCLGDEIGKILLRIQANFE 200
           HY+EF +   +C+    +  + + +  SK  E+      L   LGD    +     A FE
Sbjct: 56  HYQEFDETVTKCAGYLENVFIPYSSKGSKPEEE--AFTRLATALGDFKSFVPQAYTAIFE 113

Query: 201 NSSTRQSKAGYHR*KCSSA 257
           N ST+   AG  R KC  A
Sbjct: 114 NFSTKMKAAGVSR-KCHQA 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,490,397
Number of Sequences: 27780
Number of extensions: 218137
Number of successful extensions: 397
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)