Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_L21
(920 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.025
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.025
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.043
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.17
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.40
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.70
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.70
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 1.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.1
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.7
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.9
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 26 6.5
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 6.5
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.3 bits (75), Expect = 0.025
Identities = 23/61 (37%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = -2
Query: 913 GGXXGXXXXXXXGXAXXGXGXXXGVXXGXXXXGXXGGXGGXXGGFGXXXXWVGGG-GXXG 737
GG G G G G G G G GG GG GGFG GGG G G
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGGPGGFE--GGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Query: 736 G 734
G
Sbjct: 263 G 263
Score = 31.1 bits (67), Expect = 0.23
Identities = 22/63 (34%), Positives = 22/63 (34%), Gaps = 3/63 (4%)
Frame = -2
Query: 913 GGXXGXXXXXXXGXAXXGXGXXXGVXXGXXXX--GXXGGXGGXXGGFGXXXXWVGGG-GX 743
GG G G G G G G GG GG GGFG GGG G
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Query: 742 XGG 734
GG
Sbjct: 268 HGG 270
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.025
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +2
Query: 644 PXXXPXPXPXPXXPPXXPXPXXXXXXXXXXXXXXPPXTXPXPXRPKTPPXXPXPPPXPXX 823
P P P P PP P PP P P PP P PPP P
Sbjct: 424 PPSAPPSLP-PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Query: 824 PXXPP 838
P
Sbjct: 483 APAAP 487
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = +2
Query: 749 PXTXPXPXRPKTPPXXPXPPP-XPXXPXXPPXXXXXPXXRXXXPPXXPXPXXPXTP 913
P + P P P P PP P P PP P PP P P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP-AAPPLPPAAPAPPPAPAP 482
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 1/57 (1%)
Frame = +2
Query: 746 PPXTXPXPXRPKTPPXXPXPPPXPXXPXXPPXXXXXPXXRXXXPPXXP-XPXXPXTP 913
PP P P PP P P P P P P PP P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLP-PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 755 TXPXPXRPKTPPXXPXPPPXPXXPXXPPXXXXXPXXRXXXPPXXPXP 895
T P P P PP P P P P P P P P
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +1
Query: 784 PPXXPXXPPXXPXPXXPXXXPPXXPXPXXXTPXXPXPXXPXHP 912
PP P P P PP P P T P P P P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSP-PNSPPRP 274
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.043
Identities = 24/94 (25%), Positives = 24/94 (25%), Gaps = 4/94 (4%)
Frame = +2
Query: 644 PXXXPXPXPXPXXPPXXPXPXXXXXXXXXXXXXXPPXTXPXPXRPKTPPX---XPXPPPX 814
P P P P P P P PP P P PP P P P
Sbjct: 1145 PSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPS 1204
Query: 815 PXXPXXPPXXXXXPXXRXXXP-PXXPXPXXPXTP 913
P PP P P P P P
Sbjct: 1205 VGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 29.5 bits (63), Expect = 0.70
Identities = 21/87 (24%), Positives = 21/87 (24%), Gaps = 3/87 (3%)
Frame = +2
Query: 662 PXPXPXXPPXXPXPXXXXXXXXXXXXXXPPXTXPXPXRPKTPPXXPXPP---PXPXXPXX 832
P P P P P P PP P P P PP P P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Query: 833 PPXXXXXPXXRXXXPPXXPXPXXPXTP 913
P P P P P P
Sbjct: 1144 KPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/86 (24%), Positives = 21/86 (24%)
Frame = +2
Query: 656 PXPXPXPXXPPXXPXPXXXXXXXXXXXXXXPPXTXPXPXRPKTPPXXPXPPPXPXXPXXP 835
P P P PP P PP P PP P P P P P
Sbjct: 1023 PVPLPSADAPPI---PVPSTAPPVPIPTSTPPVPKSSSGAPSAPP--PVPAPSSEIPSIP 1077
Query: 836 PXXXXXPXXRXXXPPXXPXPXXPXTP 913
P P P P P
Sbjct: 1078 APSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = +1
Query: 772 PXQNPPXXPXXPPXXPXPXXPXXXPPXXPXPXXXTPXXPXPXXPXHP 912
P +PP P P P P P P P P P P
Sbjct: 987 PKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPP 1033
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.17
Identities = 21/87 (24%), Positives = 22/87 (25%), Gaps = 1/87 (1%)
Frame = +2
Query: 656 PXPXPXPXXPPXXPXPXXXXXXXXXXXXXXPPXTXPXPXRPKTPPXXPXPPPXPXXP-XX 832
P P P P P P P P + P PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 833 PPXXXXXPXXRXXXPPXXPXPXXPXTP 913
PP P PP P P P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPPLSQAP 210
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 817 GXXGGXGGXXGGFGXXXXWVGGGGXXGG 734
G GG GG GGFG GGG GG
Sbjct: 142 GFRGGRGGSRGGFGGNSRGGFGGGSRGG 169
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -2
Query: 862 GXGXXXGVXXGXXXXGXXGGXGGX-XGGFGXXXXWVGGGGXXGG 734
G G G G G GG GG GGFG GGG GG
Sbjct: 136 GRGGRGGFRGGRG--GSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.70
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = +2
Query: 746 PPXTXPXPXRPKTPPXX--PXPPPXPXXPXXPPXXXXXPXXRXXXPPXXPXPXXP 904
P T P + PP P PPP P PP P PP P P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP----AGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 772 PXQNPPXXPXXPPXXPXPXXPXXXPPXXPXPXXXTPXXPXP 894
P P P P P P P PP P P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPP-PLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +2
Query: 749 PXTXPXPXRPKTPPXXPXPPPXPXXPXXPPXXXXXPXXRXXXP 877
P P P P P PP P P PP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = +2
Query: 746 PPXTXPXPXRPKTPPXXPXPPPX--PXXPXXPPXXXXXPXXRXXXPPXXPXPXXPXTP 913
PP P+ P PPP P P PP P PP P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP---SAPPPPLPASSAPSVP 1744
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.70
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +2
Query: 746 PPXTXPXPXRPK-TPPXXPXPPPXPXXPXXPPXXXXXPXXRXXXPPXXPXP 895
PP P P P P PPP P PP P PP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIM-GGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +2
Query: 656 PXPXPXPXXPPXXPXPXXXXXXXXXXXXXXPPXTXPXPXRPKTPPXXPXPP 808
P P P P P P PP P PP P PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +2
Query: 662 PXPXPXXPPXXPXPXXXXXXXXXXXXXXPPXTXPXPXRPKTPPXXPXPPP 811
P P P P P PP P P P P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/91 (25%), Positives = 23/91 (25%), Gaps = 5/91 (5%)
Frame = +2
Query: 656 PXPXPXPXXP--PXXPXPXXXXXXXXXXXXXXPPXTXPXPXRPKTP--PXXPXPPPXPXX 823
P P P P P P P P P P P P P P P
Sbjct: 590 PQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSV 649
Query: 824 PXXPPXXXXXPXXRXXXPPXXP-XPXXPXTP 913
P P PP P P P P
Sbjct: 650 PQRPAVPVVPEAPSVPQPPAAPVVPEVPSVP 680
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Frame = +2
Query: 746 PPXTXPXPXRPK--TPPXXPXPPPXP 817
PP P P P PP P PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 783 PPXXPPXPPXXPXXXXPXXTPXXXP 857
PP PP PP P P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 817 GXXGGXGGXXGGFGXXXXWVGGGGXXG 737
G GG G GGFG GGG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGG 42
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +2
Query: 761 PXPXRPKTPPXXPXPPPXPXXPXXPPXXXXXPXXRXXXPPXXPXPXXPXTPXN 919
P P+ PP P P P PP P P P P P N
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPP-LPDEPVPEEPLPGEPPLPNEPVPETN 150
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +1
Query: 796 PXXPPXXPXPXXPXXXPPXXPXPXXXTPXXPXPXXPXHP 912
P PP P P P P P P P P P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 779 KTPPXXPXPPPXPXXP 826
K PP P PPP P P
Sbjct: 804 KAPPPAPLPPPAPPLP 819
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/49 (26%), Positives = 15/49 (30%)
Frame = +2
Query: 773 RPKTPPXXPXPPPXPXXPXXPPXXXXXPXXRXXXPPXXPXPXXPXTPXN 919
+P+ P P P P P PP PP TP N
Sbjct: 724 KPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSSTPMN 772
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.147 0.513
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,091,149
Number of Sequences: 5004
Number of extensions: 11308
Number of successful extensions: 185
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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