Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_L21
         (920 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    28   0.35 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.46 
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    26   1.4  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    26   1.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   1.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.6  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.8  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.8  

>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
 Frame = +2

Query: 746 PPXTXPXPXRPKTPPXXPXPPP---XPXXPXXPPXXXXXP 856
           PP T   P RP   P  P  PP    P  P  PP     P
Sbjct: 79  PPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRP 118


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 0.46
 Identities = 12/36 (33%), Positives = 12/36 (33%)
 Frame = +2

Query: 749 PXTXPXPXRPKTPPXXPXPPPXPXXPXXPPXXXXXP 856
           P   P P  P  PP  P P P    P   P     P
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +2

Query: 776 PKTPPXXPXPPPXPXXPXXPP 838
           P  P   P P P P  P  PP
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPP 594



 Score = 23.8 bits (49), Expect = 7.5
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = +2

Query: 767 PXRPKTPPXXPXPPPXPXXPXXPP 838
           P  P   P    PPP P  P   P
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSP 597


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 837 GGXXGXXGXGGGXGXXGGV 781
           GG  G  G GGG G  GG+
Sbjct: 553 GGGGGGGGGGGGGGVGGGI 571



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 825 GXXGXGGGXGXXGGVLGRXG 766
           G  G GGG G  GGV G  G
Sbjct: 553 GGGGGGGGGGGGGGVGGGIG 572


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 837 GGXXGXXGXGGGXGXXGGV 781
           GG  G  G GGG G  GG+
Sbjct: 554 GGGGGGGGGGGGGGVGGGI 572



 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 825 GXXGXGGGXGXXGGVLGRXG 766
           G  G GGG G  GGV G  G
Sbjct: 554 GGGGGGGGGGGGGGVGGGIG 573


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 825 GXXGXGGGXGXXGGVLG 775
           G  G GGG G  GGV+G
Sbjct: 547 GGGGGGGGGGGGGGVIG 563


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 17/49 (34%), Positives = 18/49 (36%)
 Frame = -3

Query: 912 GVXGXXGXGXXGGXXXRXXGXXXXXGGXXGXXGXGGGXGXXGGVLGRXG 766
           G  G  G G  G       G      G  G  G GGG G  GG +G  G
Sbjct: 533 GAGGMAGGGSDG-PEYEGAGRGGVGSGIGGGGG-GGGGGRAGGGVGATG 579



 Score = 24.2 bits (50), Expect = 5.6
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = -2

Query: 805 GXGGXXGGFGXXXXWVGGGGXXGGXXXXXXXXXXXXGXXGGXXXXXXGGGXG 650
           G GG   G       VG GG  GG            G  G       GGG G
Sbjct: 517 GGGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGGGGG 568



 Score = 23.4 bits (48), Expect = 9.8
 Identities = 18/60 (30%), Positives = 18/60 (30%)
 Frame = -2

Query: 913 GGXXGXXXXXXXGXAXXGXGXXXGVXXGXXXXGXXGGXGGXXGGFGXXXXWVGGGGXXGG 734
           GG  G              G   G   G    G   G GG   G G      GGGG  GG
Sbjct: 517 GGGGGGSGCVNGSRTVGAGGMAGGGSDGPEYEG--AGRGGVGSGIGGGGGG-GGGGRAGG 573



 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/31 (35%), Positives = 12/31 (38%)
 Frame = -2

Query: 841 VXXGXXXXGXXGGXGGXXGGFGXXXXWVGGG 749
           V  G    G  G  GG  GG      + GGG
Sbjct: 676 VGGGSGAGGGAGSSGGSGGGLASGSPYGGGG 706


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 21/84 (25%), Positives = 22/84 (26%), Gaps = 8/84 (9%)
 Frame = +2

Query: 668 PXPXXPPXXPXPXXXXXXXXXXXXXXPPXTXPXPXRPKTPPXX--------PXPPPXPXX 823
           P    PP    P              PP   P P RP+ PP             PP    
Sbjct: 195 PGNVGPPRTGTPTQPQPPRPGGMYPQPPGV-PMPMRPQMPPGAVPGMQPGMQPRPPSAQG 253

Query: 824 PXXPPXXXXXPXXRXXXPPXXPXP 895
              PP     P  R   P   P P
Sbjct: 254 MQRPPMMGQPPPIRPPNPMGGPRP 277


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -1

Query: 284 GXPPPPGPXXPGXPRXXAPGXXGXRGXXG 198
           G   P G    G  R  APG  G RG  G
Sbjct: 395 GIAGPAGAPGGGEGRPGAPGPKGPRGYEG 423


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 10/32 (31%), Positives = 10/32 (31%)
 Frame = +1

Query: 817 PXPXXPXXXPPXXPXPXXXTPXXPXPXXPXHP 912
           P P  P    P  P P       P P    HP
Sbjct: 150 PHPQSPAIREPISPGPIHPAVLLPYPQHVLHP 181


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 10/32 (31%), Positives = 10/32 (31%)
 Frame = +1

Query: 817 PXPXXPXXXPPXXPXPXXXTPXXPXPXXPXHP 912
           P P  P    P  P P       P P    HP
Sbjct: 150 PHPQSPAIREPISPGPIHPAVLLPYPQHVLHP 181


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.147    0.513 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 303,036
Number of Sequences: 2352
Number of extensions: 4055
Number of successful extensions: 48
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)