Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_L19
         (918 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0768 + 6975005-6975490                                           31   1.7  
03_03_0022 - 13834090-13834128,13835217-13835282,13835364-138354...    30   3.0  
02_05_0497 - 29502012-29502101,29502128-29502197,29502302-295024...    29   5.2  
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032...    29   6.8  
03_02_0715 + 10621789-10623243,10624074-10625018                       28   9.0  
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791...    28   9.0  

>12_01_0768 + 6975005-6975490
          Length = 161

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 457 PVHGAGNVVNTYFDFVKGIDN--RKSDDRTLVDHILSIDEVV 576
           P  G G V +  F+F   I N  ++ DD  L+D I+ ID+ V
Sbjct: 4   PKRGIGMVADVIFEFDMRIKNGEKEEDDLQLIDEIIEIDDNV 45


>03_03_0022 -
           13834090-13834128,13835217-13835282,13835364-13835461,
           13836340-13836493,13836742-13836798,13836906-13837028
          Length = 178

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = +1

Query: 178 LYLITICFKKMEQKRKEEDIPGEEGNLLEQPKEDTIAPRNPFMKVRTYVLALRPWSLSA- 354
           L+ I I F  + Q        G+     + P+ DT+AP+  F+ +    + L  W L+  
Sbjct: 89  LFSIGITFSALWQPISALRSVGKVFEPFKDPRVDTLAPKLVFIALNLAAMGLGVWKLNTL 148

Query: 355 SLLPT 369
            LLPT
Sbjct: 149 GLLPT 153


>02_05_0497 -
           29502012-29502101,29502128-29502197,29502302-29502411,
           29502530-29502641,29503341-29503498,29503592-29503807,
           29504127-29504354,29504722-29504801,29504886-29505056,
           29505179-29505281,29505369-29505551,29506313-29506813,
           29506935-29507100,29507517-29507566,29508047-29508127,
           29508291-29508398,29508874-29508939,29509053-29509109,
           29509442-29509507,29509917-29510006,29510850-29510975,
           29511681-29511717,29512192-29512250,29512562-29512615,
           29513294-29513428,29513542-29513612,29513720-29513957
          Length = 1141

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 573 HFINTQNMIY*SSVIGLAVVDSFNKIEISVDDI 475
           HF  T  +IY S  +GL  VD  N + +S+ DI
Sbjct: 651 HFFGTGVIIYHSDCLGLVAVDR-NTVAVSISDI 682


>05_04_0122 +
           18198594-18202269,18202551-18202591,18203273-18203281,
           18203336-18203551,18204257-18204361,18204761-18204919
          Length = 1401

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = +1

Query: 469 AGNVVNTYFDFVKGIDNRKSDDRTLVDHILSIDEVV 576
           AG  ++T F F+ GI++R+S+  TL   +L+I++V+
Sbjct: 16  AGESLSTEFSFIGGIEHRRSELYTL---LLAINQVI 48


>03_02_0715 + 10621789-10623243,10624074-10625018
          Length = 799

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +1

Query: 229 EDIPGEEGNLLEQPKEDTIAPRNPFMKVR 315
           ED+  EE +L E+ +ED  APR+  MK R
Sbjct: 125 EDLEEEEEDLEEEEEEDDEAPRSKRMKKR 153


>01_03_0205 +
           13777918-13778015,13778402-13778624,13779022-13779198,
           13779277-13779437,13779520-13780519,13780923-13781069,
           13781149-13781376,13781471-13781628,13781807-13782161
          Length = 848

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/70 (25%), Positives = 31/70 (44%)
 Frame = -2

Query: 602 ARYSIAPRDTTSSILKI*STKVLSSDLRLSIPLTKSK*VLTTLPAP*TGSIVHNVSKRVH 423
           + Y   P   T++++KI  +++ +   R    L K   V T       G ++HN S   H
Sbjct: 124 SEYDDLPSKETAAVIKIAPSRMATQSERFGYELAKWLGVRTP-----QGRVIHNFSSEWH 178

Query: 422 QLKPLSPGSR 393
           Q+K     +R
Sbjct: 179 QMKDAVENAR 188


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,842,887
Number of Sequences: 37544
Number of extensions: 347282
Number of successful extensions: 815
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)