Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_L18
(983 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 1e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 5e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 0.007
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.027
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.035
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.047
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.58
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.1
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 5.4
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 5.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 5.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 5.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 42.3 bits (95), Expect = 1e-04
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
Frame = -3
Query: 573 PPPPP------PPXXPXXXXXXGXXXXXPPPPPPPPXXXGGGXXPPXXXP 442
PPPPP P P PPPPPPPP G G PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 42.3 bits (95), Expect = 1e-04
Identities = 22/50 (44%), Positives = 22/50 (44%)
Frame = -2
Query: 571 PPPPPPXXPPXXXXXGXXXXGPPPPPPPPXXXXGGXXXPXXXPXKXXPPK 422
PPPPPP PP G PPPPPPPP GG P PK
Sbjct: 761 PPPPPP--PPGVAGAGP----PPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -3
Query: 573 PPPPPPPXXPXXXXXXGXXXXXPPPPPPPPXXXGGG 466
PPPPPPP G PPPPPPPP G
Sbjct: 761 PPPPPPPP--------GVAGAGPPPPPPPPPAVSAG 788
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 568 PPPPPXXPPXXXXXGXXXXGPPPPPPPPXXXXGGXXXPXXXP 443
P P P PP G PPPPPPP G P P
Sbjct: 746 PAPIPVPPPAPIMGGP----PPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.76
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -3
Query: 567 PPPPPXXPXXXXXXGXXXXXPPPPPPPPXXXGGGXXPPXXXPXKXPPQKXPXGXXXXKGG 388
PPPPP P P PPP P PP PP P GG
Sbjct: 732 PPPPP--PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 775 PPPPPPPP 782
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 776 PPPPPPPP 783
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 39.9 bits (89), Expect = 5e-04
Identities = 27/73 (36%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
Frame = +3
Query: 381 GPPPPFXXFXPGXXFGGX-FXXGXXXGXXXPPXXXXGG-GGGGGGPXXXXPXXXXXGGXX 554
GPPP F FGG G G P GG GG GGGP GG
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
Query: 555 GGGGGGXXXXXXP 593
GG GGG P
Sbjct: 259 GGFGGGPGGHGGP 271
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 486 GGGGGGGGPXXXXPXXXXXGGXXGGGGGG 572
G GGG GGP P GG G GG G
Sbjct: 192 GFGGGSGGP---PPGPGGFGGFGGFGGEG 217
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.1 bits (87), Expect = 0.001
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Frame = -3
Query: 573 PPPPPPPXXPXXXXXX---GXXXXXPPPPPPPPXXXGGGXXPPXXXPXKXPPQKXP 415
PPPPPPP G PPPPPPP G P PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 603 GGGGGXXXXXPPPPPPPXXPXXXXXXGXXXXXPPPPPPPPXXXGGGXXPP 454
G G PPPPPP PPPPPP G PP
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP 377
Score = 33.5 bits (73), Expect = 0.047
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = -3
Query: 606 GGGGGGXXXXXPPPPPPPXXPXXXXXXGXXXXXPPPPPPPPXXXGGGXXPP 454
G G PPPPP PPPPPP G PP
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 31.1 bits (67), Expect = 0.25
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Frame = -3
Query: 570 PPPPPPXXPXXXXXXGXXXXXPPPPPPP------PXXXGGGXXPPXXXPXKXPPQKXPXG 409
PP PPP PPPPPPP G G P PP+ G
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 3/65 (4%)
Frame = -2
Query: 598 GGGXXXXXXPPPPPPXXPPXXXXXGXXXXG---PPPPPPPPXXXXGGXXXPXXXPXKXXP 428
G G PPPPPP G PPPPPP G P
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSN 387
Query: 427 PKXXP 413
P P
Sbjct: 388 PPAPP 392
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = -2
Query: 568 PPPPPXXPPXXXXXGXXXXGPPPPPPPPXXXXGGXXXPXXXPXKXXPP 425
PP PP P P PPP P G P P + P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -1
Query: 503 PPPPPPXXXXGGGXXPPXXPXXKXPPKXXP 414
PPPPPP G P PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 26.6 bits (56), Expect = 5.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 563 GGGGXXXXXPPPPPPP 610
G G PPPPPPP
Sbjct: 328 GNGSSNSSLPPPPPPP 343
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = -2
Query: 571 PPPPPPXXPPXXXXXGXXXXGPPPPPPP--PXXXXGGXXXPXXXPXKXXPP 425
PP PP PP G P PP P P G P P PP
Sbjct: 428 PPSLPPSAPP-SLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 503 PPPPPPXXXXGGGXXPP 453
PPPPPP G PP
Sbjct: 361 PPPPPPRSAPSTGRQPP 377
Score = 23.8 bits (49), Expect(2) = 5.3
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +3
Query: 510 PXXXXPXXXXXGGXXGGGGGGXXXXXXPPPPPP 608
P P G G G PPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 21.0 bits (42), Expect(2) = 5.3
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 597 PPPPPP 614
PPPPPP
Sbjct: 361 PPPPPP 366
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.9 bits (59), Expect(2) = 0.007
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 507 PPPPPPPPXXXGGG 466
PPPPPPPP G
Sbjct: 946 PPPPPPPPLVSAAG 959
Score = 27.1 bits (57), Expect(2) = 0.007
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 525 GXXXXXPPPPPPPP 484
G PPPPPPPP
Sbjct: 939 GVMPAFPPPPPPPP 952
Score = 27.1 bits (57), Expect = 4.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 506 PPPPPPPXXXXGGG 465
PPPPPPP GG
Sbjct: 947 PPPPPPPLVSAAGG 960
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Score = 26.2 bits (55), Expect(2) = 0.17
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 507 PPPPPPPPXXXGGG 466
PPPPPPP GG
Sbjct: 947 PPPPPPPLVSAAGG 960
Score = 24.2 bits (50), Expect(2) = 0.80
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 591 GXXXXXPPPPPPP 553
G PPPPPPP
Sbjct: 939 GVMPAFPPPPPPP 951
Score = 23.8 bits (49), Expect(2) = 0.17
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 573 PPPPPPP 553
PPPPPPP
Sbjct: 946 PPPPPPP 952
Score = 23.4 bits (48), Expect(2) = 0.80
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 507 PPPPPPPPXXXGGGXXPP 454
PPPPPP GG P
Sbjct: 948 PPPPPPLVSAAGGKFVSP 965
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.027
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = -3
Query: 573 PPPPPPPXXPXXXXXXGXXXXXPPPPPPPPXXXGGGXXPPXXXP-XKXPPQKXP 415
PP PPP P PPP PP PP P K PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 32.7 bits (71), Expect = 0.082
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -2
Query: 571 PPPPPPXXPPXXXXXGXXXXGPPPPPPPPXXXXGGXXXPXXXPXKXXPPKXXP 413
P PPP PP PPP PP P P PP P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 29.9 bits (64), Expect = 0.58
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = -3
Query: 573 PPPPPPPXXPXXXXXXGXXXXXPPPPPPPPXXXGGGXXPPXXXPXKXPPQKXP 415
P P P P PPP PP PP P PP P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 29.1 bits (62), Expect = 1.0
Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 4/57 (7%)
Frame = -3
Query: 573 PPPPPPPXXPXXXXXXGXXXXXPPPPPPP----PXXXGGGXXPPXXXPXKXPPQKXP 415
PP P P P PPP P P P PP P PP P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 4/40 (10%)
Frame = -1
Query: 512 GXPPPPPP----PXXXXGGGXXPPXXPXXKXPPKXXPXGE 405
G PP PPP P G P P K PP P E
Sbjct: 1206 GVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSE 1245
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = -3
Query: 573 PPPPPPPXXPXXXXXXGXXXXXPPPPPPPPXXXGGGXXPPXXXPXKXPPQKXP 415
PP P P P P P PP PP P PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = -2
Query: 571 PPPPPPXXPPXXXXXGXXXXGPPPPPPPPXXXXGGXXXPXXXPXKXXPPKXXP 413
PP P P P PPP P P P P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPP 1093
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/54 (27%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Frame = -3
Query: 573 PPPPPPPXXPXXXXXXGXXXXXPPPPPP-PPXXXGGGXXPPXXXPXKXPPQKXP 415
PP P P P P P PP PP P + PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.035
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = -2
Query: 571 PPPPPPXXPPXXXXXGXXXXGPPPPPPPP 485
PPPPPP PP G PPPPPPP
Sbjct: 9 PPPPPP--PP-----GFEPPSQPPPPPPP 30
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 507 PPPPPPPPXXXGGGXXPPXXXPXKXPP 427
PPPPPPPP G PP P PP
Sbjct: 9 PPPPPPPP-----GFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.25
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 512 GXPPPPPPPXXXXGGGXXPPXXPXXKXPP 426
G PPPPPPP G PP P PP
Sbjct: 7 GNPPPPPPPP-----GFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 507 PP--PPPPPPXXXGGGXXPPXXXPXKXPPQKXPXG 409
PP PPPPPP PP P PP P G
Sbjct: 5 PPGNPPPPPP--------PPGFEPPSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.047
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 568 PPPPPXXPPXXXXXGXXXXGPPPPPPPP 485
PPPPP P GPP PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.9 bits (64), Expect = 0.58
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -3
Query: 573 PPPPPPPXXPXXXXXXGXXXXXPPPPPPPPXXXGGGXXPPXXXPXKXPP 427
P PPPPP PPPP PP G PP P P
Sbjct: 1705 PTPPPPPMS------------VPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.2 bits (55), Expect = 7.1
Identities = 16/56 (28%), Positives = 16/56 (28%), Gaps = 3/56 (5%)
Frame = -2
Query: 571 PPPPPPXXPPXXXXXGXXXXGPPPPP---PPPXXXXGGXXXPXXXPXKXXPPKXXP 413
P PP P PPPPP PPP P P P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.58
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = -2
Query: 565 PPPPXXPPXXXXXGXXXXG---PPPPPPPP 485
PPP PP PPPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 29.1 bits (62), Expect = 1.0
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 573 PPPPPPPXXPXXXXXXGXXXXXPPPPPPPP 484
PP PP PPPPPPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -2
Query: 556 PXXPPXXXXXGXXXXGPPPPPPPP 485
P PP PPPPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 25.8 bits (54), Expect = 9.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 573 PPPPPPPXXP 544
PPPPPPP P
Sbjct: 238 PPPPPPPTLP 247
Score = 25.8 bits (54), Expect = 9.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 571 PPPPPPXXPP 542
PPPPPP PP
Sbjct: 239 PPPPPPTLPP 248
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 4.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 507 PPPPPPPPXXXGGGXXPP 454
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 507 PPPPPPPP 484
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 507 PPPPPPPP 484
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 25.8 bits (54), Expect = 9.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 512 GXPPPPPPP 486
G PPPPPPP
Sbjct: 304 GLPPPPPPP 312
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = -3
Query: 501 PPPPPPXXXGGGXXPPXXXPXKXPPQKXPXGXXXXKG 391
PPPPPP P PP P G G
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISG 1918
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -3
Query: 573 PPPPPPPXXPXXXXXXGXXXXXPPPPPPP 487
PPPPPP P PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Score = 26.6 bits (56), Expect = 5.4
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -2
Query: 571 PPPPPPXXPPXXXXXGXXXXGPPPPPPPP 485
PPPPPP P PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 507 PPPPPPPP 484
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 508 PPPPPPPP 485
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 5.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 591 PPPPPPPP 614
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,234,589
Number of Sequences: 5004
Number of extensions: 39177
Number of successful extensions: 837
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 507285244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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