Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_L15
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B2.03c |||GNS1/SUR4 family protein|Schizosaccharomyces pomb... 56 7e-09
SPAC1639.01c ||SPAC806.09c|GNS1/SUR4 family protein|Schizosaccha... 53 6e-08
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 30 0.39
SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|ch... 29 0.90
SPBC119.11c |pac1|hcs|double-strand-specific ribonuclease Pac1|S... 28 2.1
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 27 3.6
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 27 4.8
SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces p... 27 4.8
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 26 6.3
SPAC3C7.07c |||arginine-tRNA protein transferase |Schizosaccharo... 26 6.3
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom... 26 6.3
SPAC227.09 |||folylpolyglutamate synthase|Schizosaccharomyces po... 26 6.3
SPAC977.06 |||S. pombe specific DUF999 family protein 3|Schizosa... 26 8.4
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 26 8.4
>SPAC1B2.03c |||GNS1/SUR4 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 56.0 bits (129), Expect = 7e-09
Identities = 36/124 (29%), Positives = 63/124 (50%)
Frame = +2
Query: 209 VLLILYVYHRFVRSWGPALMENRQPFKLKTTIIIYNLVQIYLSLYLAAQCMTRLYWSGYY 388
V++ + Y+ + S G A+M NR+P K + ++N + +S L A + ++ Y
Sbjct: 58 VIVSITAYYVIILS-GRAIMTNRKPLKQRRLFQLHNFILTIISGALLALLVEEVF-RNYM 115
Query: 389 NLWCQKIILEDTPLERIVVSRVWLYYMIKIIDLLDTVFFVLRKKFNQVTFLHVYHHLGMC 568
+ + + +V+ +L Y+ K ++L+DTVF L+KK + FLH YHH
Sbjct: 116 RNGLFYCVCDSRHFTQRLVTLYYLNYLTKYLELMDTVFLFLKKK--PLAFLHCYHHGITA 173
Query: 569 LLGF 580
LL F
Sbjct: 174 LLCF 177
>SPAC1639.01c ||SPAC806.09c|GNS1/SUR4 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 52.8 bits (121), Expect = 6e-08
Identities = 36/121 (29%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Frame = +2
Query: 206 PVLLILYVYHRFVRSWGPALMENRQPFKLKTTIIIYNL----VQIYLSLYLAAQCMTRLY 373
PV+ + + + + G +M NRQP +L+ YNL L+L + Q +Y
Sbjct: 36 PVVATIIISYYLLILVGGRIMRNRQPIRLQKIFQYYNLTFSIASAILALLIFEQVAPAIY 95
Query: 374 WSGYYNLWCQKIILEDTPLERIVVSRVWLYYMIKIIDLLDTVFFVLRKKFNQVTFLHVYH 553
G++ C + + +V + Y+ K ++L DT F VLRKK + FLH YH
Sbjct: 96 KHGFFFSIC-----NEKAWTQPLVFLYYCAYISKFLELTDTFFLVLRKK--PLQFLHCYH 148
Query: 554 H 556
H
Sbjct: 149 H 149
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 30.3 bits (65), Expect = 0.39
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +1
Query: 166 STDEDFPFGFKPDTGALDLVRVPSVRSLLGPGADGEPAALQTEDNDNHIQPRANLSVLVL 345
+T DFP F P+ ++D + S+RS P Q +D+ + + ++L L++
Sbjct: 1402 ATQTDFPLVFSPERSSID-INASSMRSEKASFEIPFPEE-QIDDDVSPVAQDSSLEELLI 1459
Query: 346 GSSVHDKVVLVRILQSLVSE 405
+ D ++R Q++ SE
Sbjct: 1460 SLDIIDLTSVMRSCQTIASE 1479
>SPBC13G1.07 |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 5/29 (17%)
Frame = -3
Query: 772 CPKCRIS----NKNCKICN-CVMYFFHHC 701
C C+ +K+C++CN CV F HHC
Sbjct: 160 CSTCKFEKPARSKHCRLCNICVEKFDHHC 188
>SPBC119.11c |pac1|hcs|double-strand-specific ribonuclease
Pac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 511 SEEVQSGDVPPRVPPLRN 564
SEE + G+ PP +PPLR+
Sbjct: 122 SEEFEEGEYPPPLPPLRS 139
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 493 YGFLRASEEVQSGDVPPRVPPLRNVSSWFRR 585
Y FL++S E + D P +V L +S W RR
Sbjct: 51 YSFLKSSLENATLDGPSQVACLDTISVWLRR 81
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 780 FEPSCEYPKWVSFVFLPH 833
+EP C Y W +FV LP+
Sbjct: 704 YEPWCNYTYWQTFVSLPY 721
>SPCC126.04c |||SAGA complex subunit Sgf73 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 470 SCNTTKPC*RQFSPVACLLILSSDTKDCN 384
SCN KP QF PVA +L+ D + N
Sbjct: 102 SCNGIKPPKPQFEPVANSQVLNKDVNNGN 130
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 129 VIFLISVPMTVPCXGVIVPLVIKH 58
VIF V +T C V++PL+ KH
Sbjct: 89 VIFFTRVLLTFFCWTVLLPLIFKH 112
>SPAC3C7.07c |||arginine-tRNA protein transferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 338 LYLAAQCMTRLYWSGYYNLWCQKI 409
++LA +C R Y+ GYY C K+
Sbjct: 203 IWLALECGYRYYYMGYYIHTCPKM 226
>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
Frame = -3
Query: 745 NCKIC-NCVMYFFHHC 701
+C +C NCV Y HHC
Sbjct: 197 HCHLCDNCVEYLDHHC 212
>SPAC227.09 |||folylpolyglutamate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 208 GALDLVRVPSVRSLLGPGADGEPAALQTED--NDNHIQPRANLSVLVLGSSVHDKVVLVR 381
G LD+ VPS+ +L GA + AA++ N + ++S +V ++ D +++
Sbjct: 273 GRLDIRSVPSLGDILFDGAHNKEAAIELAKFVNSQRREHNKSVSWVVAFTNTKDVTGIMK 332
Query: 382 IL 387
IL
Sbjct: 333 IL 334
>SPAC977.06 |||S. pombe specific DUF999 family protein
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 392 LWCQKIILEDTPLERIVVSRVWLYYMIKIIDLLDTVFFVLRKKFN 526
++C KI+++ PL IV++ V + + ++ +L ++L + FN
Sbjct: 139 IYCSKIVVKAIPLISIVIAAVVVIIAVAMVKILYICHWLL-QNFN 182
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 25.8 bits (54), Expect = 8.4
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 6/142 (4%)
Frame = +2
Query: 167 PRTKTFPL----VSNPIPVLLILYVYHRFVRSWGPALMENRQPFKLKTTIIIYNLVQIYL 334
P+ FP+ V V+++ YV+ FV +WG + NR+ +II Q Y
Sbjct: 112 PKDACFPIFWVIVFTAFRVIVMDYVFRPFVLNWG---VRNRK-------VIIRFCEQGYS 161
Query: 335 SLYLAAQCMTRLYWSGYYNLWC-QKIILEDTPLERIVVSRVWLYYMIKIIDLLDTVFFVL 511
Y LY N W ++ + ED P + + YY+I++ L + VL
Sbjct: 162 FFYYLCFWFLGLYIYRSSNYWSNEEKLFEDYP-QYYMSPLFKAYYLIQLGFWLQQI-LVL 219
Query: 512 RKKFNQVTFLHVY-HHLGMCLL 574
+ + ++ HH+ C L
Sbjct: 220 HLEQRRADHWQMFAHHIVTCAL 241
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,740,802
Number of Sequences: 5004
Number of extensions: 81926
Number of successful extensions: 229
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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