BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_L15
(897 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 25 1.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 23 2.9
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 23 2.9
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 3.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 3.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 3.8
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 3.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 3.8
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 5.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 5.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 5.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 5.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 5.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 5.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 6.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 6.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 6.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 6.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 6.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 6.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 8.7
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 8.7
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 8.7
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 8.7
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 207 GIGFETKGKVFVRGSAK 157
G GFE +G VFV+G +
Sbjct: 951 GFGFEQRGLVFVKGKGQ 967
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.4 bits (48), Expect = 2.9
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -3
Query: 802 GYSHEGSNRTCPKCRISNKNCKI 734
G H GSN P+ SN C +
Sbjct: 312 GSVHNGSNNGSPRSPESNSRCSV 334
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 206 PVLLILYVYHRFV 244
P+LLI Y+YH ++
Sbjct: 119 PILLIAYIYHLYM 131
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 280 LPVLHQRRAPRANEPMVHVQDQEHRYR 200
+PV + PR+ P + +Q+Q R+R
Sbjct: 119 VPVYYGNFPPRSMGPWISIQEQIPRFR 145
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 280 LPVLHQRRAPRANEPMVHVQDQEHRYR 200
+PV + PR+ P + +Q+Q R+R
Sbjct: 119 VPVYYGNFPPRSMGPWISIQEQIPRFR 145
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 280 LPVLHQRRAPRANEPMVHVQDQEHRYR 200
+PV + PR+ P + +Q+Q R+R
Sbjct: 119 VPVYYGNFPPRSMGPWISIQEQIPRFR 145
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.0 bits (47), Expect = 3.8
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -1
Query: 129 VIFLISVPMTVPCXGVIVPLVIKH 58
V+FL+ V +P +++PL+ K+
Sbjct: 276 VVFLLLVSKILPPTSLVLPLIAKY 299
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.0 bits (47), Expect = 3.8
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 280 LPVLHQRRAPRANEPMVHVQDQEHRYR 200
+PV + PR+ P + +Q+Q R+R
Sbjct: 352 VPVYYGNFPPRSMGPWISIQEQIPRFR 378
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 277 PVLHQRRAPRANEPMVHVQDQEHRYR 200
PV + PR P V +Q+Q R+R
Sbjct: 351 PVYYGNFPPRPMGPFVSIQEQIPRFR 376
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 277 PVLHQRRAPRANEPMVHVQDQEHRYR 200
PV + PR P V +Q+Q R+R
Sbjct: 351 PVYYGNFPPRPMGPFVSIQEQIPRFR 376
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 277 PVLHQRRAPRANEPMVHVQDQEHRYR 200
PV + PR P V +Q+Q R+R
Sbjct: 351 PVYYGNFPPRPMGPFVSIQEQIPRFR 376
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 277 PVLHQRRAPRANEPMVHVQDQEHRYR 200
PV + PR P V +Q+Q R+R
Sbjct: 340 PVYYGNFPPRPMGPFVSIQEQIPRFR 365
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 5.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 280 LPVLHQRRAPRANEPMVHVQDQEHRYR 200
+P+ PR+ EP + +Q+Q R+R
Sbjct: 367 VPIYCGNFPPRSMEPWISMQEQIPRFR 393
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.6 bits (46), Expect = 5.0
Identities = 26/92 (28%), Positives = 36/92 (39%)
Frame = -1
Query: 756 SAIRIVRFAIALCISSTTAAPRAA*LSRPGSNCTSPACTNEFMKPXITP*PPGTYLVPTK 577
S ++ VRF L + T A S G + TN+ P PG PTK
Sbjct: 63 SGVQTVRFKNELERNITIKLDTRAEDSTRGEQEANLGYTNKMSTRGKRPASPGYVQPPTK 122
Query: 576 PRRHIPKWWYTWRNVT*LNFFRSTKKTVSNRS 481
++ K+ + N N+F S K SN S
Sbjct: 123 HQKLDQKFIFPQENNYNDNYFYS-KSNGSNSS 153
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 280 LPVLHQRRAPRANEPMVHVQDQEHRYR 200
+PV + PR P + +Q+Q R+R
Sbjct: 119 VPVYYGNFLPRPMGPWISIQEQIPRFR 145
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 280 LPVLHQRRAPRANEPMVHVQDQEHRYR 200
+PV + PR P + +Q+Q R+R
Sbjct: 122 VPVYYGNFLPRPMGPWISIQEQIPRFR 148
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 280 LPVLHQRRAPRANEPMVHVQDQEHRYR 200
+PV + PR P + +Q+Q R+R
Sbjct: 122 VPVYYGNFLPRPMGPWISIQEQIPRFR 148
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 280 LPVLHQRRAPRANEPMVHVQDQEHRYR 200
+PV + PR P + +Q+Q R+R
Sbjct: 122 VPVYYGNFLPRPMGPWISIQEQIPRFR 148
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.6
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 280 LPVLHQRRAPRANEPMVHVQDQEHRYR 200
+PV + PR P + +Q+Q R+R
Sbjct: 122 VPVYYGNFLPRPMGPWISIQEQIPRFR 148
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 6.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 398 TKDCNILTNTTLSCTE 351
T+DC++ LSC E
Sbjct: 94 TRDCSLFPGNALSCKE 109
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 277 PVLHQRRAPRANEPMVHVQDQEHRYR 200
PV + PR P V +Q+Q R+R
Sbjct: 118 PVYYGNFPPRPMGPFVSMQEQIPRFR 143
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 277 PVLHQRRAPRANEPMVHVQDQEHRYR 200
PV + PR P V +Q+Q R+R
Sbjct: 118 PVYYGNFPPRPMGPFVSMQEQIPRFR 143
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 277 PVLHQRRAPRANEPMVHVQDQEHRYR 200
PV + PR P V +Q+Q R+R
Sbjct: 118 PVYYGNFPPRPMGPFVSMQEQIPRFR 143
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.7
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 277 PVLHQRRAPRANEPMVHVQDQEHRYR 200
PV + PR P V +Q+Q R+R
Sbjct: 118 PVYYGNFPPRPMGPFVSMQEQIPRFR 143
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,676
Number of Sequences: 438
Number of extensions: 6256
Number of successful extensions: 42
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -