Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_L13
         (888 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.3  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           26   1.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   4.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -1

Query: 516 GAGXFXGGXGGGAXKKXPXXPGGGG 442
           G G   G  GGG        PGGGG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 23.4 bits (48), Expect = 9.4
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 510 GXFXGGXGGGAXKKXPXXPGGGG 442
           G   GG GG +    P   GGGG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGG 231


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 501  KXPXPXGXGGGGGFXP 548
            K P P G GGGGG  P
Sbjct: 1414 KPPGPEGVGGGGGKSP 1429


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 21/73 (28%), Positives = 22/73 (30%)
 Frame = -2

Query: 656 PPGPFXXXGPFGXXXKKXFFXGXPXXXGXKXXPPXGGXKXPPPPXTXGXGXFXGGXGXGP 477
           P GP    GP G      F  G     G     P GG   P  P   G     G  G   
Sbjct: 415 PKGPRGYEGPQGPKGMDGF-DGEKGERGQMG--PKGGQGVPGRPGPEGMPGDKGDKGESG 471

Query: 476 XKKXPXPXGGGGF 438
               P P G  G+
Sbjct: 472 SVGMPGPQGPRGY 484


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,944
Number of Sequences: 2352
Number of extensions: 6944
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)