Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_L12
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0039 - 21782093-21782320,21782383-21782754,21783031-217834...    32   0.73 
05_03_0343 + 12732673-12732792,12732903-12733091,12733220-127333...    32   0.73 
10_01_0202 + 2178297-2178406,2180725-2180980,2181838-2181912,218...    31   1.7  
02_03_0134 - 15596379-15597689                                         30   2.2  
05_03_0568 + 15560511-15561093,15562522-15562535                       29   3.9  
04_04_1558 - 34417801-34417920,34418930-34419051,34419458-344195...    29   6.8  
12_01_0929 - 9229172-9229483,9230009-9230359                           28   9.0  

>05_05_0039 -
           21782093-21782320,21782383-21782754,21783031-21783496,
           21784896-21784993,21785179-21785362,21785462-21785574,
           21785942-21786127,21786191-21786364
          Length = 606

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = +1

Query: 154 IAPRLSR--AYRRFGASLLWNGRTKNA*GRSCAVSLRILQLISIPRRSQLQLPRKSSWCC 327
           I P LS    YR   A L+WNG  K      C++ L   Q  S  R +    PR  S CC
Sbjct: 390 IIPSLSHILTYRSASARLIWNGPHKYCDQSKCSLPL-WHQSTSATRTNSAVTPRALSLCC 448

Query: 328 A 330
           +
Sbjct: 449 S 449


>05_03_0343 +
           12732673-12732792,12732903-12733091,12733220-12733387,
           12733468-12733522,12733646-12733704,12734784-12734909,
           12737281-12737409,12737486-12737540,12737633-12737808,
           12737903-12737986,12738602-12738625
          Length = 394

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -1

Query: 360 VMGSIDRSATCTTPARLSWKLKLTPPWYTNKLQYPKANSTAAA--LSILRPPIPKQTGAK 187
           + G+IDRS     P+  +     TPP +   + Y   +   A     +L PP P QT  +
Sbjct: 52  ISGTIDRSKAAPAPSAGTPGAGTTPPVHDLNVPYEATSEEYATPTADMLFPPTPLQTPIQ 111

Query: 186 TPI 178
           TP+
Sbjct: 112 TPL 114


>10_01_0202 +
           2178297-2178406,2180725-2180980,2181838-2181912,
           2182386-2182436,2182598-2182724,2182806-2182952,
           2183846-2183976,2184088-2184189,2184604-2184702,
           2185117-2185182,2185218-2185448
          Length = 464

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 635 FLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPRRLVSKVERLFTS 772
           F E  K+  C ++   Y + PRL + L+ L   + + S++E  FTS
Sbjct: 325 FKEKKKQEQCSYNVIAYKDKPRLRTALEMLRTTKEIESRLEEFFTS 370


>02_03_0134 - 15596379-15597689
          Length = 436

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/65 (23%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
 Frame = +2

Query: 287 GVNFNFQESRAGV--VQVADLSIEPITKTSVDDIELNKNITLNDIFISVKTTKHYQYTRL 460
           G+N   Q  +  +   ++ + + E   K +VD+ ELN+ ++ ++++  V TTK+ +    
Sbjct: 309 GINSKVQAVKEAIDNSELKEAANETELKEAVDETELNEVVSESELYKDVNTTKYTEDALE 368

Query: 461 PIILK 475
           P++++
Sbjct: 369 PMLIE 373


>05_03_0568 + 15560511-15561093,15562522-15562535
          Length = 198

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 728 APRRLVSKVERLFTSRSNIQKPTNKLCFRLGRHGGAGSA*QKL 856
           +PR   S   R       +  PT+ LCFR    GG G   ++L
Sbjct: 143 SPRSSFSSTSRGDDDDGEVASPTSTLCFRTRHSGGGGGGGRRL 185


>04_04_1558 -
           34417801-34417920,34418930-34419051,34419458-34419531,
           34419736-34419819,34419945-34420080,34420806-34420836,
           34421228-34421386,34422375-34422595,34422685-34422898
          Length = 386

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 229 KHSSSAHSKADWRQNADTLAKASALFRSSVV 137
           +H +++H+K  W Q  D + K  +L +S +V
Sbjct: 211 EHQANSHAKKGWEQFTDAVIKTISLKKSGIV 241


>12_01_0929 - 9229172-9229483,9230009-9230359
          Length = 220

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -2

Query: 596 YVGATQSNLYSPCGHSS 546
           Y+G +  NLYSP GHSS
Sbjct: 204 YLGVSSINLYSPRGHSS 220


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,644,682
Number of Sequences: 37544
Number of extensions: 443364
Number of successful extensions: 1322
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)