SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_L12
         (912 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF108139-1|AAD34321.1|  191|Homo sapiens radical fringe protein.      126   1e-28
AF193612-1|AAF07187.1|  258|Homo sapiens fringe protein protein.      125   2e-28
U94354-1|AAC51360.1|  257|Homo sapiens lunatic fringe protein.        125   3e-28
Z93096-1|CAB07511.1|  321|Homo sapiens manic fringe homolog (Dro...   118   2e-26
CR456518-1|CAG30404.1|  321|Homo sapiens MFNG protein.                118   2e-26
BC094814-1|AAH94814.1|  321|Homo sapiens MFNG O-fucosylpeptide 3...   118   2e-26
U94352-1|AAC51358.1|  321|Homo sapiens manic fringe precursor pr...   116   2e-25
BC014851-1|AAH14851.1|  250|Homo sapiens LFNG protein protein.         93   1e-18
AK094016-1|BAC04269.1|  197|Homo sapiens protein ( Homo sapiens ...    59   2e-08
BC146805-1|AAI46806.1|  233|Homo sapiens RFNG protein protein.         46   3e-04
BC068595-1|AAH68595.1|  498|Homo sapiens beta 1,3-galactosyltran...    39   0.022
AY190526-1|AAO37647.1|  498|Homo sapiens beta3-glycosyltransfera...    39   0.022
AL138965-2|CAH73049.2|  498|Homo sapiens beta 1,3-galactosyltran...    39   0.022
AL137142-6|CAI12432.2|  498|Homo sapiens beta 1,3-galactosyltran...    39   0.022
AB101481-1|BAD13528.1|  498|Homo sapiens glucosyltransferase pro...    39   0.022
BC046247-1|AAH46247.1|  802|Homo sapiens carbohydrate (chondroit...    39   0.029
AY358529-1|AAQ88893.1|  802|Homo sapiens CHSY1 protein.                39   0.029
AB071402-1|BAB64936.1|  802|Homo sapiens chondroitin synthase pr...    39   0.029
AB023207-1|BAA76834.2|  883|Homo sapiens KIAA0990 protein protein.     39   0.029
AY124582-1|AAM93542.1|  144|Homo sapiens lunatic fringe protein.       38   0.067
U94353-1|AAC51359.1|  191|Homo sapiens radical fringe protein.         34   0.82 

>AF108139-1|AAD34321.1|  191|Homo sapiens radical fringe protein.
          Length = 191

 Score =  126 bits (303), Expect = 1e-28
 Identities = 53/105 (50%), Positives = 75/105 (71%)
 Frame = +2

Query: 407 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSAS 586
           +D+FI+VKTT+     RL ++L+TW   A++QT+ FTD +  + + Q    ++NTNCSA 
Sbjct: 58  DDVFIAVKTTRKNHGPRLRLLLRTWISRARQQTFIFTDGDDPELELQGGDRVINTNCSAV 117

Query: 587 HQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQT 721
             R+ LCCKMSVEYD+F+ESG+KWFCH DDD YVN   L+ +L +
Sbjct: 118 RTRQALCCKMSVEYDKFIESGRKWFCHVDDDNYVNARSLLHLLSS 162


>AF193612-1|AAF07187.1|  258|Homo sapiens fringe protein protein.
          Length = 258

 Score =  125 bits (302), Expect = 2e-28
 Identities = 56/102 (54%), Positives = 74/102 (72%)
 Frame = +2

Query: 410 DIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASH 589
           D+FI+VKTTK +   RL ++L+TW    KE T+ FTD E +     T G++V TNCSA+H
Sbjct: 11  DVFIAVKTTKKFHRARLDLLLETWISRHKEMTFIFTDGEDEALARHT-GNVVITNCSAAH 69

Query: 590 QRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVL 715
            R+ L CKM+VEYDRF+ESG+KWFCH DDD YVN+  L+ +L
Sbjct: 70  SRQALSCKMAVEYDRFIESGRKWFCHVDDDNYVNLRALLRLL 111


>U94354-1|AAC51360.1|  257|Homo sapiens lunatic fringe protein.
          Length = 257

 Score =  125 bits (301), Expect = 3e-28
 Identities = 56/102 (54%), Positives = 74/102 (72%)
 Frame = +2

Query: 410 DIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASH 589
           D+FI+VKTTK +   RL ++L+TW    KE T+ FTD E +     T G++V TNCSA+H
Sbjct: 10  DVFIAVKTTKKFHRARLDLLLETWISRHKEMTFIFTDGEDEALARHT-GNVVITNCSAAH 68

Query: 590 QRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVL 715
            R+ L CKM+VEYDRF+ESG+KWFCH DDD YVN+  L+ +L
Sbjct: 69  SRQALSCKMAVEYDRFIESGRKWFCHVDDDNYVNLRALLLLL 110


>Z93096-1|CAB07511.1|  321|Homo sapiens manic fringe homolog
           (Drosophila) protein.
          Length = 321

 Score =  118 bits (285), Expect = 2e-26
 Identities = 52/113 (46%), Positives = 71/113 (62%)
 Frame = +2

Query: 398 ITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNC 577
           + L+D+FI+VKTT+ +   RL ++L TW    +EQT+ FTD+  K  Q +   H+V TNC
Sbjct: 51  LQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNC 110

Query: 578 SASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPR 736
           SA H    L CKM+ E+D FL SG +WFCH DDD YVN   L+ +L+     R
Sbjct: 111 SAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLAR 163


>CR456518-1|CAG30404.1|  321|Homo sapiens MFNG protein.
          Length = 321

 Score =  118 bits (285), Expect = 2e-26
 Identities = 52/113 (46%), Positives = 71/113 (62%)
 Frame = +2

Query: 398 ITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNC 577
           + L+D+FI+VKTT+ +   RL ++L TW    +EQT+ FTD+  K  Q +   H+V TNC
Sbjct: 51  LQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNC 110

Query: 578 SASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPR 736
           SA H    L CKM+ E+D FL SG +WFCH DDD YVN   L+ +L+     R
Sbjct: 111 SAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLAR 163


>BC094814-1|AAH94814.1|  321|Homo sapiens MFNG O-fucosylpeptide
           3-beta-N-acetylglucosaminyltransferase protein.
          Length = 321

 Score =  118 bits (285), Expect = 2e-26
 Identities = 52/113 (46%), Positives = 71/113 (62%)
 Frame = +2

Query: 398 ITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNC 577
           + L+D+FI+VKTT+ +   RL ++L TW    +EQT+ FTD+  K  Q +   H+V TNC
Sbjct: 51  LQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTREQTFVFTDSPDKGLQERLGSHLVVTNC 110

Query: 578 SASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPR 736
           SA H    L CKM+ E+D FL SG +WFCH DDD YVN   L+ +L+     R
Sbjct: 111 SAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLAR 163


>U94352-1|AAC51358.1|  321|Homo sapiens manic fringe precursor
           protein.
          Length = 321

 Score =  116 bits (278), Expect = 2e-25
 Identities = 51/113 (45%), Positives = 70/113 (61%)
 Frame = +2

Query: 398 ITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNC 577
           + L+D+FI+VKTT+ +   RL ++L TW    +E T+ FTD+  K  Q +   H+V TNC
Sbjct: 51  LQLHDVFIAVKTTRAFHRLRLELLLDTWVSRTRELTFVFTDSPDKGLQERLGSHLVVTNC 110

Query: 578 SASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPR 736
           SA H    L CKM+ E+D FL SG +WFCH DDD YVN   L+ +L+     R
Sbjct: 111 SAEHSHPALSCKMAAEFDTFLASGLRWFCHVDDDNYVNPRALLQLLRAFPLAR 163


>BC014851-1|AAH14851.1|  250|Homo sapiens LFNG protein protein.
          Length = 250

 Score = 93.1 bits (221), Expect = 1e-18
 Identities = 41/72 (56%), Positives = 54/72 (75%)
 Frame = +2

Query: 500 QTWFFTDTETKQHQNQTNGHMVNTNCSASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDD 679
           +T+ FTD E +     T G++V TNCSA+H R+ L CKM+VEYDRF+ESG+KWFCH DDD
Sbjct: 15  ETFIFTDGEDEALARHT-GNVVITNCSAAHSRQALSCKMAVEYDRFIESGRKWFCHVDDD 73

Query: 680 XYVNVPRLVSVL 715
            YVN+  L+ +L
Sbjct: 74  NYVNLRALLRLL 85


>AK094016-1|BAC04269.1|  197|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36697 fis, clone UTERU2008962, moderately
           similar to Homo sapiens radical fringe (RFNG) gene. ).
          Length = 197

 Score = 59.3 bits (137), Expect = 2e-08
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = +2

Query: 614 MSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQT 721
           MSVEYD+F+ESG+KWFCH DDD YVN   L+ +L +
Sbjct: 1   MSVEYDKFIESGRKWFCHVDDDNYVNARSLLHLLSS 36


>BC146805-1|AAI46806.1|  233|Homo sapiens RFNG protein protein.
          Length = 233

 Score = 45.6 bits (103), Expect = 3e-04
 Identities = 19/47 (40%), Positives = 32/47 (68%)
 Frame = +2

Query: 407 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQ 547
           +D+FI+VKTT+     RL ++L+TW   A++QT+ FTD +  + + Q
Sbjct: 58  DDVFIAVKTTRKNHGPRLRLLLRTWISRARQQTFIFTDGDDPELELQ 104


>BC068595-1|AAH68595.1|  498|Homo sapiens beta
           1,3-galactosyltransferase-like protein.
          Length = 498

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
 Frame = +2

Query: 392 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 571
           K +   DIF++VKT K +   R+PI+ +TW   A    ++   TE           + NT
Sbjct: 262 KPVKKKDIFVAVKTCKKFHGDRMPIVKQTWESQASLIEYYSDYTENSIPTVDLG--IPNT 319

Query: 572 NCSASHQRKHLCCKMSVEYDRFLESGK---KWFCHFDDDXYVNVPRLVSVL 715
           +      R H C K     +RFL   +    W    DDD  +++ RL  +L
Sbjct: 320 D------RGH-CGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLL 363


>AY190526-1|AAO37647.1|  498|Homo sapiens
           beta3-glycosyltransferase-like protein.
          Length = 498

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
 Frame = +2

Query: 392 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 571
           K +   DIF++VKT K +   R+PI+ +TW   A    ++   TE           + NT
Sbjct: 262 KPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLG--IPNT 319

Query: 572 NCSASHQRKHLCCKMSVEYDRFLESGK---KWFCHFDDDXYVNVPRLVSVL 715
           +      R H C K     +RFL   +    W    DDD  +++ RL  +L
Sbjct: 320 D------RGH-CGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLL 363


>AL138965-2|CAH73049.2|  498|Homo sapiens beta
           1,3-galactosyltransferase-like protein.
          Length = 498

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
 Frame = +2

Query: 392 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 571
           K +   DIF++VKT K +   R+PI+ +TW   A    ++   TE           + NT
Sbjct: 262 KPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLG--IPNT 319

Query: 572 NCSASHQRKHLCCKMSVEYDRFLESGK---KWFCHFDDDXYVNVPRLVSVL 715
           +      R H C K     +RFL   +    W    DDD  +++ RL  +L
Sbjct: 320 D------RGH-CGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLL 363


>AL137142-6|CAI12432.2|  498|Homo sapiens beta
           1,3-galactosyltransferase-like protein.
          Length = 498

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
 Frame = +2

Query: 392 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 571
           K +   DIF++VKT K +   R+PI+ +TW   A    ++   TE           + NT
Sbjct: 262 KPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLG--IPNT 319

Query: 572 NCSASHQRKHLCCKMSVEYDRFLESGK---KWFCHFDDDXYVNVPRLVSVL 715
           +      R H C K     +RFL   +    W    DDD  +++ RL  +L
Sbjct: 320 D------RGH-CGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLL 363


>AB101481-1|BAD13528.1|  498|Homo sapiens glucosyltransferase
           protein.
          Length = 498

 Score = 39.1 bits (87), Expect = 0.022
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
 Frame = +2

Query: 392 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 571
           K +   DIF++VKT K +   R+PI+ +TW   A    ++   TE           + NT
Sbjct: 262 KPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLG--IPNT 319

Query: 572 NCSASHQRKHLCCKMSVEYDRFLESGK---KWFCHFDDDXYVNVPRLVSVL 715
           +      R H C K     +RFL   +    W    DDD  +++ RL  +L
Sbjct: 320 D------RGH-CGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLL 363


>BC046247-1|AAH46247.1|  802|Homo sapiens carbohydrate (chondroitin)
           synthase 1 protein.
          Length = 802

 Score = 38.7 bits (86), Expect = 0.029
 Identities = 27/112 (24%), Positives = 48/112 (42%)
 Frame = +2

Query: 407 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSAS 586
           N +F+ V T + Y  TR     +TW +    +  FF+   +          +   + S  
Sbjct: 85  NFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYP 144

Query: 587 HQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPRRL 742
            Q+K     +   +D +L+   +WF   DDD Y+   RL + L++L +   L
Sbjct: 145 PQKKSFMM-LKYMHDHYLDK-YEWFMRADDDVYIKGDRLENFLRSLNSSEPL 194


>AY358529-1|AAQ88893.1|  802|Homo sapiens CHSY1 protein.
          Length = 802

 Score = 38.7 bits (86), Expect = 0.029
 Identities = 27/112 (24%), Positives = 48/112 (42%)
 Frame = +2

Query: 407 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSAS 586
           N +F+ V T + Y  TR     +TW +    +  FF+   +          +   + S  
Sbjct: 85  NFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYP 144

Query: 587 HQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPRRL 742
            Q+K     +   +D +L+   +WF   DDD Y+   RL + L++L +   L
Sbjct: 145 PQKKSFMM-LKYMHDHYLDK-YEWFMRADDDVYIKGDRLENFLRSLNSSEPL 194


>AB071402-1|BAB64936.1|  802|Homo sapiens chondroitin synthase
           protein.
          Length = 802

 Score = 38.7 bits (86), Expect = 0.029
 Identities = 27/112 (24%), Positives = 48/112 (42%)
 Frame = +2

Query: 407 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSAS 586
           N +F+ V T + Y  TR     +TW +    +  FF+   +          +   + S  
Sbjct: 85  NFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYP 144

Query: 587 HQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPRRL 742
            Q+K     +   +D +L+   +WF   DDD Y+   RL + L++L +   L
Sbjct: 145 PQKKSFMM-LKYMHDHYLDK-YEWFMRADDDVYIKGDRLENFLRSLNSSEPL 194


>AB023207-1|BAA76834.2|  883|Homo sapiens KIAA0990 protein protein.
          Length = 883

 Score = 38.7 bits (86), Expect = 0.029
 Identities = 27/112 (24%), Positives = 48/112 (42%)
 Frame = +2

Query: 407 NDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSAS 586
           N +F+ V T + Y  TR     +TW +    +  FF+   +          +   + S  
Sbjct: 166 NFLFVGVMTAQKYLQTRAVAAYRTWSKTIPGKVQFFSSEGSDTSVPIPVVPLRGVDDSYP 225

Query: 587 HQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPRRL 742
            Q+K     +   +D +L+   +WF   DDD Y+   RL + L++L +   L
Sbjct: 226 PQKKSFMM-LKYMHDHYLDK-YEWFMRADDDVYIKGDRLENFLRSLNSSEPL 275


>AY124582-1|AAM93542.1|  144|Homo sapiens lunatic fringe protein.
          Length = 144

 Score = 37.5 bits (83), Expect = 0.067
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = +2

Query: 410 DIFISVKTTKHYQYTRLPIILKTWFQLAKE 499
           D+FI+VKTTK +   RL ++L+TW    KE
Sbjct: 114 DVFIAVKTTKKFHRARLDLLLETWISRHKE 143


>U94353-1|AAC51359.1|  191|Homo sapiens radical fringe protein.
          Length = 191

 Score = 33.9 bits (74), Expect = 0.82
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 656 WFCHFDDDXYVNVPRLVSVLQT 721
           WFCH DDD YVN   L+ +L +
Sbjct: 1   WFCHVDDDNYVNARSLLHLLSS 22


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,896,199
Number of Sequences: 237096
Number of extensions: 2471615
Number of successful extensions: 9570
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9561
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -