Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_L12
         (912 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein...   173   3e-43
AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p pro...   173   3e-43
AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-P...   173   3e-43
AY241926-1|AAO85275.1|  827|Drosophila melanogaster chondroitin ...    33   0.72 
AE014298-2180|AAS65341.2|  832|Drosophila melanogaster CG9220-PC...    33   0.72 
AE014134-1023|AAF52326.3|  535|Drosophila melanogaster CG9109-PA...    33   0.72 
AE014134-1404|AAF52604.2|  420|Drosophila melanogaster CG8673-PA...    32   0.95 
AY071741-1|AAL49363.1|  122|Drosophila melanogaster RH47419p pro...    29   6.7  
AE013599-1962|AAM68552.1|  122|Drosophila melanogaster CG10205-P...    29   6.7  
AE013599-1961|AAF58200.1|  224|Drosophila melanogaster CG10205-P...    29   6.7  

>L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein
           protein.
          Length = 412

 Score =  173 bits (421), Expect = 3e-43
 Identities = 82/137 (59%), Positives = 99/137 (72%)
 Frame = +2

Query: 305 QESRAGVVQVADLSIEPITKTSVDDIELNKNITLNDIFISVKTTKHYQYTRLPIILKTWF 484
           + SR G + + DLS   +T T    +       L+DIFISVKTTK+Y  TRL +I+KTWF
Sbjct: 120 RRSRNGEL-LRDLSQRAVTATPQPPVT-----ELDDIFISVKTTKNYHDTRLALIIKTWF 173

Query: 485 QLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASHQRKHLCCKMSVEYDRFLESGKKWFC 664
           QLA++QTWFFTDT+   +Q +T GH++NT CS  H RK LCCKMS E D FLESGKKWFC
Sbjct: 174 QLARDQTWFFTDTDDHYYQEKTKGHLINTKCSQGHFRKALCCKMSAELDVFLESGKKWFC 233

Query: 665 HFDDDXYVNVPRLVSVL 715
           HFDDD YVNVPRLV +L
Sbjct: 234 HFDDDNYVNVPRLVKLL 250


>AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p
           protein.
          Length = 412

 Score =  173 bits (421), Expect = 3e-43
 Identities = 82/137 (59%), Positives = 99/137 (72%)
 Frame = +2

Query: 305 QESRAGVVQVADLSIEPITKTSVDDIELNKNITLNDIFISVKTTKHYQYTRLPIILKTWF 484
           + SR G + + DLS   +T T    +       L+DIFISVKTTK+Y  TRL +I+KTWF
Sbjct: 120 RRSRNGEL-LRDLSQRAVTATPQPPVT-----ELDDIFISVKTTKNYHDTRLALIIKTWF 173

Query: 485 QLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASHQRKHLCCKMSVEYDRFLESGKKWFC 664
           QLA++QTWFFTDT+   +Q +T GH++NT CS  H RK LCCKMS E D FLESGKKWFC
Sbjct: 174 QLARDQTWFFTDTDDHYYQEKTKGHLINTKCSQGHFRKALCCKMSAELDVFLESGKKWFC 233

Query: 665 HFDDDXYVNVPRLVSVL 715
           HFDDD YVNVPRLV +L
Sbjct: 234 HFDDDNYVNVPRLVKLL 250


>AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-PA
           protein.
          Length = 412

 Score =  173 bits (421), Expect = 3e-43
 Identities = 82/137 (59%), Positives = 99/137 (72%)
 Frame = +2

Query: 305 QESRAGVVQVADLSIEPITKTSVDDIELNKNITLNDIFISVKTTKHYQYTRLPIILKTWF 484
           + SR G + + DLS   +T T    +       L+DIFISVKTTK+Y  TRL +I+KTWF
Sbjct: 120 RRSRNGEL-LRDLSQRAVTATPQPPVT-----ELDDIFISVKTTKNYHDTRLALIIKTWF 173

Query: 485 QLAKEQTWFFTDTETKQHQNQTNGHMVNTNCSASHQRKHLCCKMSVEYDRFLESGKKWFC 664
           QLA++QTWFFTDT+   +Q +T GH++NT CS  H RK LCCKMS E D FLESGKKWFC
Sbjct: 174 QLARDQTWFFTDTDDHYYQEKTKGHLINTKCSQGHFRKALCCKMSAELDVFLESGKKWFC 233

Query: 665 HFDDDXYVNVPRLVSVL 715
           HFDDD YVNVPRLV +L
Sbjct: 234 HFDDDNYVNVPRLVKLL 250


>AY241926-1|AAO85275.1|  827|Drosophila melanogaster chondroitin
           synthase-like protein protein.
          Length = 827

 Score = 32.7 bits (71), Expect = 0.72
 Identities = 25/120 (20%), Positives = 51/120 (42%)
 Frame = +2

Query: 377 DIELNKNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNG 556
           D +  +N   N +F+ V T K +   R   +  TW +    +  FF+   +        G
Sbjct: 54  DEDTIQNSQRNLVFVGVMTAKSFLEGRARAVYDTWGKEVPGRMAFFSSEGSYSDDLPVVG 113

Query: 557 HMVNTNCSASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPR 736
            + N +     Q+K     +   Y+ +++  + WF   DDD Y+   +L   L+++ + +
Sbjct: 114 -LKNVDDRYPPQKKSFMM-LYYMYEHYIDRFE-WFIRADDDVYMEPDKLERFLRSIDSSK 170


>AE014298-2180|AAS65341.2|  832|Drosophila melanogaster CG9220-PC
           protein.
          Length = 832

 Score = 32.7 bits (71), Expect = 0.72
 Identities = 25/120 (20%), Positives = 51/120 (42%)
 Frame = +2

Query: 377 DIELNKNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNG 556
           D +  +N   N +F+ V T K +   R   +  TW +    +  FF+   +        G
Sbjct: 59  DEDTIQNSQRNLVFVGVMTAKSFLEGRARAVYDTWGKEVPGRMAFFSSEGSYSDDLPVVG 118

Query: 557 HMVNTNCSASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVLQTLXAPR 736
            + N +     Q+K     +   Y+ +++  + WF   DDD Y+   +L   L+++ + +
Sbjct: 119 -LKNVDDRYPPQKKSFMM-LYYMYEHYIDRFE-WFIRADDDVYMEPDKLERFLRSIDSSK 175


>AE014134-1023|AAF52326.3|  535|Drosophila melanogaster CG9109-PA,
           isoform A protein.
          Length = 535

 Score = 32.7 bits (71), Expect = 0.72
 Identities = 24/108 (22%), Positives = 46/108 (42%)
 Frame = +2

Query: 392 KNITLNDIFISVKTTKHYQYTRLPIILKTWFQLAKEQTWFFTDTETKQHQNQTNGHMVNT 571
           ++ T + I+ ++KT   +   R+PII +TW   A+ + ++    +       T       
Sbjct: 267 EHTTGSHIYFAIKTCAKFHKERIPIIERTWAADARNRRYYSDVADVGIPAIGTG----IP 322

Query: 572 NCSASHQRKHLCCKMSVEYDRFLESGKKWFCHFDDDXYVNVPRLVSVL 715
           N    H  K +        D   +   +W    DDD  ++VPR+ ++L
Sbjct: 323 NVQTGHCAKTMAILQLSLKDIGKQLDIRWLMLVDDDTLLSVPRVSALL 370


>AE014134-1404|AAF52604.2|  420|Drosophila melanogaster CG8673-PA
           protein.
          Length = 420

 Score = 32.3 bits (70), Expect = 0.95
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +2

Query: 653 KWFCHFDDDXYVNVPRLVSVLQTLXAPRRLVSK 751
           K+    DDD ++NVP+L++++ TL A R +  +
Sbjct: 263 KYVLKTDDDMFINVPKLLTLISTLKANRTIYGR 295


>AY071741-1|AAL49363.1|  122|Drosophila melanogaster RH47419p
           protein.
          Length = 122

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 439 TLSVHKITDHLEDLVPVSKRTDMVLHGHRNETTPKSD 549
           +L++ + TD  ED++ ++ +T  V+  H  +  PK D
Sbjct: 21  SLAIEESTDIEEDVISIANQTQKVIRVHPQDLPPKKD 57


>AE013599-1962|AAM68552.1|  122|Drosophila melanogaster CG10205-PB,
           isoform B protein.
          Length = 122

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 439 TLSVHKITDHLEDLVPVSKRTDMVLHGHRNETTPKSD 549
           +L++ + TD  ED++ ++ +T  V+  H  +  PK D
Sbjct: 21  SLAIEESTDIEEDVISIANQTQKVIRVHPQDLPPKKD 57


>AE013599-1961|AAF58200.1|  224|Drosophila melanogaster CG10205-PA,
           isoform A protein.
          Length = 224

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +1

Query: 439 TLSVHKITDHLEDLVPVSKRTDMVLHGHRNETTPKSD 549
           +L++ + TD  ED++ ++ +T  V+  H  +  PK D
Sbjct: 21  SLAIEESTDIEEDVISIANQTQKVIRVHPQDLPPKKD 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,228,532
Number of Sequences: 53049
Number of extensions: 772463
Number of successful extensions: 2032
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)