Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_L12
         (912 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    26   0.41 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    26   0.41 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.9  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   3.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   8.9  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   8.9  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   8.9  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 45  GVL*PVLLSWQYVSPRNLSLNPVYQ*CFDYNTTDERNSAEAFA 173
           G + PVL S Q  + R+ SL  V       ++TD RN A A A
Sbjct: 850 GAIVPVLESIQQKAKRSKSLQEVSSDKLQESSTDSRNPALALA 892


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 45   GVL*PVLLSWQYVSPRNLSLNPVYQ*CFDYNTTDERNSAEAFA 173
            G + PVL S Q  + R+ SL  V       ++TD RN A A A
Sbjct: 888  GAIVPVLESIQQKAKRSKSLQEVSSDKLQESSTDSRNPALALA 930


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +2

Query: 245 LLALGYCSLLVYQGGVNFNFQESRAGVVQVADLSIEPITKTSVDDIELNKNITLN 409
           L+ALG C+  V Q   + +    +  V+Q+     +PI    + ++  + +I  N
Sbjct: 10  LVALGVCAPNVKQRAADQDLLNKQQDVIQLLQKISQPIPNQELQNLGASYDIESN 64


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = +3

Query: 132 YNTTDERNSAEAFASVSAFWRQSALEWADEE 224
           YN  +  ++ +    +   W QS L W   E
Sbjct: 71  YNVDEYSHTVDFHVMLKLMWEQSHLTWKSSE 101


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 533 QHQNQTNGHMVNTNCSASHQRKHLCCKMSV 622
           Q++NQ N H  +     +H R  L   +SV
Sbjct: 114 QYKNQNNNHYTSHQHLRTHLRGTLTVNVSV 143


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = -1

Query: 396 FLFSSISSTLVLVMGSIDRSATCTTPARLSW 304
           F F  + + + L  G  D    C   +++SW
Sbjct: 7   FFFILVITLIFLYFGEADIKKDCRKESKVSW 37


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 70  LRRTGYKTPXLKDSLXXAGW 11
           +RRT Y TP   D+   +G+
Sbjct: 364 MRRTPYSTPEYDDTYMDSGY 383


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,577
Number of Sequences: 438
Number of extensions: 5019
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)