Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_L10
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944           57   2e-08
02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254     57   2e-08
02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907     57   2e-08
01_05_0120 - 18349131-18349880,18349972-18350259,18350383-18350568     30   2.3  

>06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944
          Length = 51

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = +1

Query: 151 PFLXWVRMRTGNTIRYNAKRRHWRRTKL 234
           P   W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 22  PIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254
          Length = 51

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = +1

Query: 151 PFLXWVRMRTGNTIRYNAKRRHWRRTKL 234
           P   W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 22  PIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907
          Length = 51

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = +1

Query: 151 PFLXWVRMRTGNTIRYNAKRRHWRRTKL 234
           P   W+RMRT NTIRYNAKRRHWRRTKL
Sbjct: 22  PIPYWIRMRTDNTIRYNAKRRHWRRTKL 49


>01_05_0120 - 18349131-18349880,18349972-18350259,18350383-18350568
          Length = 407

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +2

Query: 107 IINAQIGQKAETKQTHSSXG*GCAQETLFDITLRGVTGEGQSSSCKLV 250
           +  A   +K+E K   S+ G   A  T+FDIT  G   +G++ S K V
Sbjct: 18  VYGAAYAKKSEAKVA-SAPGLAAAVNTVFDITELGAVADGKTDSTKAV 64


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,005,406
Number of Sequences: 37544
Number of extensions: 188782
Number of successful extensions: 305
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)