Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_L08
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.002
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.002
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.002
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.002
L14331-3|AAA28096.1| 180|Caenorhabditis elegans Hypothetical pr... 36 0.036
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.11
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.11
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.25
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 3.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP GG P PP PPP GG PPPPP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
P GG P P PP PPP G PPPPP G
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 35.5 bits (78), Expect = 0.048
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +3
Query: 528 PXXKXPXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P P P G GG PP G PP PPPP GG PPPP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP--------PGGCPPPP 772
Score = 35.1 bits (77), Expect = 0.063
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 552 PXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P G GG PP G PP PPPP GG PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPP 762
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G P P PP PPP G PPPPP G
Sbjct: 707 PPITGGPPPPPGL--PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 577 PPXGGXFPXXXXXXXPPXXXXXKXPPPXXFXXXXXLXGGXPPPP 708
PP G P PP PPP GG PPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP GG P PP PPP GG PPPPP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
P GG P P PP PPP G PPPPP G
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 35.5 bits (78), Expect = 0.048
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +3
Query: 528 PXXKXPXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P P P G GG PP G PP PPPP GG PPPP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP--------PGGCPPPP 772
Score = 35.1 bits (77), Expect = 0.063
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 552 PXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P G GG PP G PP PPPP GG PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPP 762
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G P P PP PPP G PPPPP G
Sbjct: 707 PPITGGPPPPPGL--PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 577 PPXGGXFPXXXXXXXPPXXXXXKXPPPXXFXXXXXLXGGXPPPP 708
PP G P PP PPP GG PPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP GG P PP PPP GG PPPPP G
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
P GG P P PP PPP G PPPPP G
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Score = 35.5 bits (78), Expect = 0.048
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +3
Query: 528 PXXKXPXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P P P G GG PP G PP PPPP GG PPPP
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP--------PGGCPPPP 355
Score = 35.1 bits (77), Expect = 0.063
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 552 PXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P G GG PP G PP PPPP GG PPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPP--GGLPPISGGPPPPP 345
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G P P PP PPP G PPPPP G
Sbjct: 290 PPITGGPPPPPGL--PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +1
Query: 577 PPXGGXFPXXXXXXXPPXXXXXKXPPPXXFXXXXXLXGGXPPPP 708
PP G P PP PPP GG PPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 528 PXXKXPXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P P P G PP G PP PPPP GG PPPP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 708 XXG 716
G
Sbjct: 293 RAG 295
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
PP G P P PP PPP G PPPPP
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 34.7 bits (76), Expect = 0.083
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPP-XXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G P P PP PPP G PPPPP G
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 278
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G SP P PP PP GG PPP G
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 327
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
PP SP P PP PPP G PPPP
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 516 GXXXPXXKXPXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPP 659
G P + P SP G PP G PP PPPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G P P PP PPP G PPP G
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 7/51 (13%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXG-------GGPPPPP 709
PP GG P P PP PP G G PPPPP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 528 PXXKXPXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P P P G PP G PP PPPP GG PPPP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 708 XXG 716
G
Sbjct: 314 RAG 316
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
PP G P P PP PPP G PPPPP
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 34.7 bits (76), Expect = 0.083
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPP-XXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G P P PP PPP G PPPPP G
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 299
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G SP P PP PP GG PPP G
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 348
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
PP SP P PP PPP G PPPP
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 516 GXXXPXXKXPXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPP 659
G P + P SP G PP G PP PPPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G P P PP PPP G PPP G
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 7/51 (13%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXG-------GGPPPPP 709
PP GG P P PP PP G G PPPPP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +3
Query: 528 PXXKXPXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P P P G PP G PP PPPP GG PPPP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 708 XXG 716
G
Sbjct: 299 RAG 301
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
PP G P P PP PPP G PPPPP
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 34.7 bits (76), Expect = 0.083
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPP-XXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G P P PP PPP G PPPPP G
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 284
Score = 33.9 bits (74), Expect = 0.15
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G SP P PP PP GG PPP G
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 333
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
PP SP P PP PPP G PPPP
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 516 GXXXPXXKXPXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPP 659
G P + P SP G PP G PP PPPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G P P PP PPP G PPP G
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 7/51 (13%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXG-------GGPPPPP 709
PP GG P P PP PP G G PPPPP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>L14331-3|AAA28096.1| 180|Caenorhabditis elegans Hypothetical
protein K12H4.4 protein.
Length = 180
Score = 35.9 bits (79), Expect = 0.036
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 135 MYSVLTRGNAILTYTLSVLACLTFLVFFINPDCGLQNWGP-K*IXXKVVVKNVPDYGAFW 311
M+++L+R NA+L +TL V+A +T F L P K V V+NV DY
Sbjct: 1 MHNLLSRANALLAFTLWVMAAVTAACFL--STVFLDYTVPTKLTVNDVKVRNVVDYATDE 58
Query: 312 EPNDLGXLTFDXK 350
+ DL L F+ K
Sbjct: 59 QQADLATLNFNLK 71
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 599 PXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
P P PP PPP GG PPPPP G
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +3
Query: 543 PXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P P G G PP PP PPPP GG PPPP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM----RYPGGMPPPP 351
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
PP G +P P PPP G PPPPP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 587 GGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
G P P PP PPP GG PPPPP
Sbjct: 315 GMPPPPPPSRFGPPGMGGMPPPPPP---GMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +2
Query: 599 PXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
P P PP PPP GG PPPPP G
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +3
Query: 543 PXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P P G G PP PP PPPP GG PPPP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM----RYPGGMPPPP 361
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
PP G +P P PPP G PPPPP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 587 GGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
G P P PP PPP GG PPPPP
Sbjct: 325 GMPPPPPPSRFGPPGMGGMPPPPPP---GMRYPGGMPPPPP 362
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +3
Query: 579 PXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P GV PP G PP PPPP F G PPPP
Sbjct: 720 PPPGVGPPPPQ-GIPPMGFDPNKPPPPMF--QQGFNAGAPPPP 759
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 579 PXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPP 704
P G P PP PPPP F GG PPP
Sbjct: 759 PFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPPXG 715
PP G P P P PPP F G PPPP G
Sbjct: 719 PPPPGVGPPPPQGIPPMGFDPNKPPPPMF---QQGFNAGAPPPPFG 761
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +2
Query: 578 PPXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPP 706
PP G + PP PPP GGPPPP
Sbjct: 758 PPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +3
Query: 507 FFFGXXXPXXKXPXXPXXXXGXXSPXGGVFPPXXXXG-XPPXXXXXKXPPPPXFXXXXXX 683
F F P P P G G+ PP G PP P P +
Sbjct: 121 FPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGM 180
Query: 684 XGGXPPP 704
G PPP
Sbjct: 181 PGAYPPP 187
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +2
Query: 575 FPPXGGXSPXPXXXXX-PPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
+PP G P P PP PPP GG P P P
Sbjct: 159 YPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGP 204
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +3
Query: 507 FFFGXXXPXXKXPXXPXXXXGXXSPXGGVFPPXXXXG-XPPXXXXXKXPPPPXFXXXXXX 683
F F P P P G G+ PP G PP P P +
Sbjct: 121 FPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGM 180
Query: 684 XGGXPPP 704
G PPP
Sbjct: 181 PGAYPPP 187
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +2
Query: 575 FPPXGGXSPXPXXXXX-PPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
+PP G P P PP PPP GG P P P
Sbjct: 159 YPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGPPMPGP 204
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 543 PXXPXXXXGXXSPXGGVFPPXXXXGXPPXXXXXKXPPPPXFXXXXXXXGGXPPPP 707
P P G PP G P PPPP GG PPPP
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPP--PPVGMANGGPPPPP 555
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = -3
Query: 715 PXXGGGGXP---PXXXXXXXKXGGGGXXXXXXXGGXPXXXXGGXTPPXGEXXPXXXXGXX 545
P GGGG P P GG G G P G PP G+ P G
Sbjct: 156 PLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 215
Query: 544 G 542
G
Sbjct: 216 G 216
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Frame = -3
Query: 715 PXXGGGGXP---PXXXXXXXKXGGGGXXXXXXXGGXPXXXXGGXTPPXGEXXPXXXXGXX 545
P GGGG P P GG G G P G PP G+ P G
Sbjct: 436 PLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 495
Query: 544 G 542
G
Sbjct: 496 G 496
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 581 PXGGXSPXPXXXXXPPXXXXXXXPPPXFXXXXXXXGGGPPPPP 709
P G P P PP PPP GG PPPPP
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPG-------PGGIPPPPP 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,149,833
Number of Sequences: 27780
Number of extensions: 274075
Number of successful extensions: 1126
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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