Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_L06
(928 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 122 2e-26
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 120 4e-26
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 92 2e-17
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 47 8e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.006
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.090
UniRef50_Q1DRT9 Cluster: Ubiquitin carrier protein; n=1; Coccidi... 35 2.6
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 34 4.5
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.9
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.9
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 33 7.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 122 bits (293), Expect = 2e-26
Identities = 72/119 (60%), Positives = 75/119 (63%)
Frame = +1
Query: 484 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLFRP 663
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRR PLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 664 CRLRILSASPSDXLLXRXXXXPYLTLVGISVPVYSRSLQAGLCARTPRSTPTXAPYPVT 840
CRL P L VGISV S + +C P S PT APYPVT
Sbjct: 62 CRLP--DTCP-PFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFS-PTAAPYPVT 116
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 120 bits (290), Expect = 4e-26
Identities = 71/121 (58%), Positives = 77/121 (63%)
Frame = +1
Query: 316 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 495
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 496 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLFRPCRLR 675
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RR PL APSCALLF P L
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
Query: 676 I 678
+
Sbjct: 134 V 134
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 92.3 bits (219), Expect = 2e-17
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +1
Query: 502 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPLEAPSCALLFRP 663
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRR PL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 492 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 379
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 292 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 459
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +1
Query: 391 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 564
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 565 IDAQVRGGETRQDYKDTRRXPLEAPSCALLFRP 663
I Q + +T+ +YK T PL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 46.8 bits (106), Expect = 8e-04
Identities = 33/72 (45%), Positives = 38/72 (52%)
Frame = -3
Query: 791 HSPAWSERLYTGTEIPTSVRYGXXXXRXXXQSEGEADSIRKRQGRNRRAHEGASRGKRLV 612
+SPAWSER + +SV Y R + E S KRQGRNRRAHEGA+ K
Sbjct: 31 YSPAWSERPKPSRDT-SSVSY-EKAPRFPKGKKAEQVS-GKRQGRNRRAHEGAAGEKSPA 87
Query: 611 SL*SCRVSPPLT 576
SL PPLT
Sbjct: 88 SLSPVGFRPPLT 99
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 94 DPDMIRYIDEFGQTTTRMQ 150
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 411 HSKAVIRLSTESGDNAGKNM 470
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.006
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 218 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 340
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.090
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 362 ERGSGRAPNTQTASPRALADSLMQ 291
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q1DRT9 Cluster: Ubiquitin carrier protein; n=1;
Coccidioides immitis|Rep: Ubiquitin carrier protein -
Coccidioides immitis
Length = 469
Score = 35.1 bits (77), Expect = 2.6
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 754 VPVYSRSLQAGLCARTPRSTPTXAPYPVTXRLXSNPVKPNYRPG 885
+P YSRS +G+ + +S P+ P P T ++ +N V+P R G
Sbjct: 422 MPQYSRSPLSGVGTISSKSRPSKPPPPATRKVSTNSVRPKPRTG 465
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 34.3 bits (75), Expect = 4.5
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 801 PPFNPDRCALSGNXPS*XQPGKTELSP 881
PP PDRCALSGN P + +LSP
Sbjct: 4 PPVQPDRCALSGNYRLESNPVRHDLSP 30
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.9
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 501 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 379
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.9
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 252 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 88
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 33.5 bits (73), Expect = 7.8
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 735 HAGRYLSSGV*PFAPSWAVCTNPPFNP 815
H+G +S+ FAPSWAV NPPF+P
Sbjct: 74 HSG--ISARCRSFAPSWAVSKNPPFSP 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 868,838,361
Number of Sequences: 1657284
Number of extensions: 16894241
Number of successful extensions: 42858
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 40839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42818
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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