BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_L04
(912 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 26 1.8
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 25 4.2
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 24 5.6
AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein... 24 7.4
AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding pr... 23 9.7
AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding pr... 23 9.7
AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding pr... 23 9.7
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 25.8 bits (54), Expect = 1.8
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 294 RHNRPAVYTIAQHRSHKYRSSRGHHEHP 377
+ +P+ Y QH H HH HP
Sbjct: 165 QQQQPSSYHQQQHPGHSQHHHHHHHHHP 192
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 24.6 bits (51), Expect = 4.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 582 YLDQFSVYKNAN*VAMFTLELPL 514
+LD F Y N VA+FT+E+ L
Sbjct: 512 WLDDFQEYTNMFFVALFTMEMLL 534
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 24.2 bits (50), Expect = 5.6
Identities = 8/23 (34%), Positives = 10/23 (43%)
Frame = +3
Query: 330 HRSHKYRSSRGHHEHPDTVPPAG 398
H +H + HH HP AG
Sbjct: 498 HHAHPHHHHHHHHHHPTAADLAG 520
>AJ439353-6|CAD27928.1| 695|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 695
Score = 23.8 bits (49), Expect = 7.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 360 PVNFCIYAIDVVQWCKLQADCGVCVSLQYTM 268
PV F I +++ WC L VC + TM
Sbjct: 536 PVIFAI-CFNILNWCMLVRSSNVCPYVSSTM 565
>AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding
protein AgamOBP30 protein.
Length = 289
Score = 23.4 bits (48), Expect = 9.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 282 LQYTMTGRLFASAHRHVVDCR*FGPAILEEFSLSTG 175
LQY M R F+ A HV +L + L TG
Sbjct: 186 LQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTG 221
>AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding
protein OBPjj83c protein.
Length = 273
Score = 23.4 bits (48), Expect = 9.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 282 LQYTMTGRLFASAHRHVVDCR*FGPAILEEFSLSTG 175
LQY M R F+ A HV +L + L TG
Sbjct: 170 LQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTG 205
>AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding
protein 1 protein.
Length = 289
Score = 23.4 bits (48), Expect = 9.7
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 282 LQYTMTGRLFASAHRHVVDCR*FGPAILEEFSLSTG 175
LQY M R F+ A HV +L + L TG
Sbjct: 186 LQYPMPDRSFSCAKTHVAGAEGDFDCVLRCYMLRTG 221
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 895,164
Number of Sequences: 2352
Number of extensions: 18092
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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