Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_K24
         (950 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical pr...   205   4e-53
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    29   6.5  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    29   6.5  
U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>Z73426-1|CAA97792.1|  155|Caenorhabditis elegans Hypothetical
           protein F40F11.1 protein.
          Length = 155

 Score =  205 bits (500), Expect = 4e-53
 Identities = 96/142 (67%), Positives = 113/142 (79%), Gaps = 3/142 (2%)
 Frame = +3

Query: 84  MADQTEKAFQKQATVFLNRKGGM---KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFT 254
           M++QTE+AF KQ TV LN K  +    +K  R+ + VGLGFK PR+A+EGTYIDKKCP+ 
Sbjct: 1   MSEQTERAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWA 60

Query: 255 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIG 434
           GNV IRG ILTGVV K KM RTIV+RRDYLHY+ KY R+EKRH+N+  H SP FRD+  G
Sbjct: 61  GNVPIRGMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFRDIHPG 120

Query: 435 DIVTIGECRPLSKTVRFNVLKV 500
           D+VTIGECRPLSKTVRFNVLKV
Sbjct: 121 DLVTIGECRPLSKTVRFNVLKV 142


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 156  SSCHLSCSGKRWPVSETLSLSDPPFCLTNEK 64
            +SC++ CSG++W   E  S S+   C +N K
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSET--CGSNGK 1039


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 156  SSCHLSCSGKRWPVSETLSLSDPPFCLTNEK 64
            +SC++ CSG++W   E  S S+   C +N K
Sbjct: 1011 ASCYIDCSGRKWNYGEWTSCSET--CGSNGK 1039


>U22831-4|AAK20066.1|  633|Caenorhabditis elegans Hypothetical
           protein F47D12.5 protein.
          Length = 633

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 494 QNIESNCFGQRSAFADRYNITNLHVPEARRQMHGH 390
           +++E  CF Q   F D +N+T L + +  R M+ H
Sbjct: 129 RSVELECFEQ---FVDLFNLTGLRILDVSRSMYKH 160


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,377,883
Number of Sequences: 27780
Number of extensions: 256490
Number of successful extensions: 682
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)