Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_K23
(917 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 37 0.023
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 36 0.031
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 36 0.031
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 36 0.031
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 36 0.031
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 36 0.054
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 35 0.071
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.071
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.071
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.071
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 35 0.094
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 35 0.094
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 35 0.094
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 34 0.16
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 34 0.16
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.22
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 33 0.29
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 33 0.29
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 33 0.29
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 33 0.29
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 33 0.38
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.38
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 33 0.38
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 33 0.38
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.38
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 32 0.50
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 32 0.50
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 32 0.50
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 32 0.50
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 32 0.50
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 32 0.50
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 32 0.50
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.66
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 32 0.66
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.87
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 31 0.87
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 31 0.87
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 31 0.87
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 31 0.87
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 31 1.2
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 31 1.2
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 31 1.2
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 31 1.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.2
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 1.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.5
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 31 1.5
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 31 1.5
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 31 1.5
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 31 1.5
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.0
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 30 2.0
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 30 2.0
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 30 2.7
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 30 2.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 29 3.5
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 29 3.5
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 4.7
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 4.7
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 29 4.7
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 29 6.2
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 29 6.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 6.2
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 6.2
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical pr... 28 8.1
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 8.1
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 28 8.1
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 28 8.1
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 28 8.1
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 28 8.1
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 8.1
AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen prot... 28 8.1
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.023
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
G G P PG + G G + P PP G PG AG +P P P G
Sbjct: 210 GPDGQPGAPGPDGQPGAGGTTSTNQPGPPGPAGPPGPAGPAGEDAYAQPSPAGTPGPPG 268
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXA 608
PGP G G P G+P PG P K G A
Sbjct: 235 PGPPGPAGPPGPAGPAGEDAYAQPSPAGTPGPPGPPGKDGEA 276
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 36.3 bits (80), Expect = 0.031
Identities = 25/83 (30%), Positives = 26/83 (31%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PGP G GG P G+P PG P K AP P G
Sbjct: 104 PGPPGPGGSPGKPGKPGKP--------GAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP 155
Query: 663 SPXGPAPKXKXXXPPXKPPPPXG 731
P GPA P P P G
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAG 178
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/97 (27%), Positives = 28/97 (28%)
Frame = +3
Query: 441 PKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXX 620
P G G G PG G G P PG P P
Sbjct: 106 PPGPGGSPG-KPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP----GPAGP 160
Query: 621 KRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P PP G GSP GP+ P PP P G
Sbjct: 161 AGPPGPPGPDGNPGSPAGPS-----GPGPAGPPGPAG 192
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGP 682
G G P PG + + G G P P G G P GP
Sbjct: 201 GAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGP 243
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 36.3 bits (80), Expect = 0.031
Identities = 25/83 (30%), Positives = 26/83 (31%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PGP G GG P G+P PG P K AP P G
Sbjct: 104 PGPPGPGGSPGKPGKPGKP--------GAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP 155
Query: 663 SPXGPAPKXKXXXPPXKPPPPXG 731
P GPA P P P G
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAG 178
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/97 (27%), Positives = 28/97 (28%)
Frame = +3
Query: 441 PKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXX 620
P G G G PG G G P PG P P
Sbjct: 106 PPGPGGSPG-KPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP----GPAGP 160
Query: 621 KRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P PP G GSP GP+ P PP P G
Sbjct: 161 AGPPGPPGPDGNPGSPAGPS-----GPGPAGPPGPAG 192
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGP 682
G G P PG + + G G P P G G P GP
Sbjct: 201 GAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGP 243
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 36.3 bits (80), Expect = 0.031
Identities = 25/83 (30%), Positives = 26/83 (31%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PGP G GG P G+P PG P K AP P G
Sbjct: 104 PGPPGPGGSPGKPGKPGKP--------GAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP 155
Query: 663 SPXGPAPKXKXXXPPXKPPPPXG 731
P GPA P P P G
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAG 178
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/97 (27%), Positives = 28/97 (28%)
Frame = +3
Query: 441 PKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXX 620
P G G G PG G G P PG P P
Sbjct: 106 PPGPGGSPG-KPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP----GPAGP 160
Query: 621 KRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P PP G GSP GP+ P PP P G
Sbjct: 161 AGPPGPPGPDGNPGSPAGPS-----GPGPAGPPGPAG 192
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGP 682
G G P PG + + G G P P G G P GP
Sbjct: 201 GAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGP 243
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 36.3 bits (80), Expect = 0.031
Identities = 25/83 (30%), Positives = 26/83 (31%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PGP G GG P G+P PG P K AP P G
Sbjct: 104 PGPPGPGGSPGKPGKPGKP--------GAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP 155
Query: 663 SPXGPAPKXKXXXPPXKPPPPXG 731
P GPA P P P G
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAG 178
Score = 29.5 bits (63), Expect = 3.5
Identities = 27/97 (27%), Positives = 28/97 (28%)
Frame = +3
Query: 441 PKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXX 620
P G G G PG G G P PG P P
Sbjct: 106 PPGPGGSPG-KPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPP----GPAGP 160
Query: 621 KRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P PP G GSP GP+ P PP P G
Sbjct: 161 AGPPGPPGPDGNPGSPAGPS-----GPGPAGPPGPAG 192
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGP 682
G G P PG + + G G P P G G P GP
Sbjct: 201 GAPGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGP 243
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 35.5 bits (78), Expect = 0.054
Identities = 30/107 (28%), Positives = 34/107 (31%), Gaps = 8/107 (7%)
Frame = +3
Query: 435 KXPKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXX----GSPXX---PGKPX 593
K P+G G PGP G G P GSP PG P
Sbjct: 133 KCPQGAPGPAGAP-GNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPG 191
Query: 594 KXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP-PXKPPPPXG 731
+ G + + P P R G G P P P P PP P G
Sbjct: 192 RPGQSGQRSRGLPGPSGRPGPQGPPGAPGQPGSGSTPGPAGPPGPPG 238
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 35.1 bits (77), Expect = 0.071
Identities = 28/100 (28%), Positives = 33/100 (33%), Gaps = 2/100 (2%)
Frame = +3
Query: 432 KKXPKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAP 611
++ PKG G PGP G G P P PG P G A
Sbjct: 160 EQGPKGPDAAPG----EPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQA- 214
Query: 612 XXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP--PXKPPPP 725
+ P PP G G+P P K + P P K P
Sbjct: 215 -GQQGPPGPPGSNGIDGAPGAPGAKGEPGTPGEPGKDGEP 253
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGP 682
+G G P PG+ G AK P P G PG GP
Sbjct: 176 KGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGP 219
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXGK 734
G+P PGKP K G AP PP++ P P P PP P G+
Sbjct: 99 GTPGKPGKPGKPG-APGQPGTPGRPPQQ------PCEPTTPPPCQPCPQGPPGPPGQ 148
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXGK 734
G PG+P G P PP + G G P PA P PP G+
Sbjct: 165 GPDAAPGEPGPKGPIGP-----PGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQ 216
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.071
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +3
Query: 579 PGKPXKXGXAPXXXKRXPXPPKRXGXX---GSPXGPAPKXKXXXPPXKPPPPXG 731
P P G P P PP G G P P P PP PPPP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G P P P G P P PP G P P P PP PPPP G
Sbjct: 740 GGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP--PPPPPG 791
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 563 GVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
G P PG G P PP G P P G P PPP G
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.071
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +3
Query: 579 PGKPXKXGXAPXXXKRXPXPPKRXGXX---GSPXGPAPKXKXXXPPXKPPPPXG 731
P P G P P PP G G P P P PP PPPP G
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G P P P G P P PP G P P P PP PPPP G
Sbjct: 740 GGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP--PPPPPG 791
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 563 GVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
G P PG G P PP G P P G P PPP G
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.071
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +3
Query: 579 PGKPXKXGXAPXXXKRXPXPPKRXGXX---GSPXGPAPKXKXXXPPXKPPPPXG 731
P P G P P PP G G P P P PP PPPP G
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G P P P G P P PP G P P P PP PPPP G
Sbjct: 323 GGPPPP--PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP--PPPPPG 374
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 563 GVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
G P PG G P PP G P P G P PPP G
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 34.7 bits (76), Expect = 0.094
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PGP G G P P PG P + G A P PP G G
Sbjct: 187 PGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGP--PGPPGAPGNDG 244
Query: 663 SPXGPAPK 686
P P PK
Sbjct: 245 PPGPPGPK 252
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 34.7 bits (76), Expect = 0.094
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PG G G P G P PG P + G P PP G G
Sbjct: 228 PGAPGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDG 287
Query: 663 SPXGP 677
P GP
Sbjct: 288 QPGGP 292
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/74 (25%), Positives = 21/74 (28%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PG G G P G P PG+ G A P PP G G
Sbjct: 231 PGQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPG 290
Query: 663 SPXGPAPKXKXXXP 704
P P + P
Sbjct: 291 GPGQPGGPGQDGGP 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G G P PG+ G P PP G PG P G
Sbjct: 255 GPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPG 296
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 34.7 bits (76), Expect = 0.094
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PGP G G P P PG P + G A P PP G G
Sbjct: 187 PGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPAGP--PGPPGAPGNDG 244
Query: 663 SPXGPAPK 686
P P PK
Sbjct: 245 PPGPPGPK 252
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 33.9 bits (74), Expect = 0.16
Identities = 26/89 (29%), Positives = 27/89 (30%), Gaps = 6/89 (6%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGS--PXXPGKPXKXGXAPXXXKRXPXPPKRXGX 656
PGP G G P G+ P P P P P PP G
Sbjct: 122 PGPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGP---PGPPGPDGT 178
Query: 657 XGSPXGPAPKXKXXXP----PXKPPPPXG 731
G P GP P P P PP P G
Sbjct: 179 PGEPGGPGPAGSPAGPSGPGPAGPPGPAG 207
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/68 (32%), Positives = 25/68 (36%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PGP G G P G P PG+P G A + P P + G G
Sbjct: 183 PGPKGPKG-PPGAPGAPEHQESQECPRGEPLIPGEPGPPGEA--GPQGPPGSPGQPGADG 239
Query: 663 SPXGPAPK 686
SP P PK
Sbjct: 240 SPGQPGPK 247
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G+P PG+P K G AP PP++ +P P + P PP P G
Sbjct: 109 GTPGKPGRPGKPG-APGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPG 163
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +2
Query: 563 GVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGP 682
G P PGE G GP P P G PG P GP
Sbjct: 209 GEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGP 249
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 579 PGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P P G P P PP P G +P P PPPP G
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
GSP P P G P P PP G P +P P PPPP G
Sbjct: 235 GSPPPP--PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAG 286
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 579 PGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P P G P P PP P G +P P PPPP G
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
GSP P P G P P PP G P +P P PPPP G
Sbjct: 256 GSPPPP--PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAG 307
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +3
Query: 579 PGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P P G P P PP P G +P P PPPP G
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
GSP P P G P P PP G P +P P PPPP G
Sbjct: 241 GSPPPP--PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP--PPPPAG 292
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.29
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Frame = +3
Query: 486 GPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXP--GKPXKXGXAPXXXKRXPXPP--KRXG 653
GP GGG GP G P P G P + P + P PP ++
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPP-GQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQR 730
Query: 654 XXGSPXGPAPKXKXXXPPXK-PPPPXGK 734
G P P P P + PPPP G+
Sbjct: 731 GYGYPPPPQPGHPYQQPYGQMPPPPHGQ 758
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 33.1 bits (72), Expect = 0.29
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Frame = +3
Query: 486 GPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXP--GKPXKXGXAPXXXKRXPXPP--KRXG 653
GP GGG GP G P P G P + P + P PP ++
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPP-GQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQR 730
Query: 654 XXGSPXGPAPKXKXXXPPXK-PPPPXGK 734
G P P P P + PPPP G+
Sbjct: 731 GYGYPPPPQPGHPYQQPYGQMPPPPHGQ 758
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/60 (31%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG-PQKXXXXTPXKAPPPXG 730
G G P PG+ + G P PP G PG P G P P P P G
Sbjct: 230 GSPGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSG 289
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 678 PAXXGXPGXPXFLGGLGXFXAXXGPXPFFXV-SPGXXGTPFTP 553
P G PG P F GG+G A P P SPG G P P
Sbjct: 202 PGNDGQPGAPSFGGGVG---APGAPGPAGDAGSPGQPGAPGQP 241
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGP 682
G G P PG G G P PP G PG P GP
Sbjct: 259 GPAGPPGPPGNNGAPGGGYGVGP--PGPPGPSGRPGAPGQPGP 299
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/76 (27%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRX--PXPPKRXGX 656
PG G G P G PG P G AP P PP G
Sbjct: 232 PGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNG-APGGGYGVGPPGPPGPSGR 290
Query: 657 XGSPXGPAPKXKXXXP 704
G+P P P + P
Sbjct: 291 PGAPGQPGPDGQPGAP 306
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/84 (27%), Positives = 24/84 (28%), Gaps = 1/84 (1%)
Frame = +3
Query: 483 PGPXGGGGG-PXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXX 659
PGP G G P G+P G P G AP P P G
Sbjct: 192 PGPAGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPG-APGQVTETPGTPGPAGAA 250
Query: 660 GSPXGPAPKXKXXXPPXKPPPPXG 731
G P P P P P G
Sbjct: 251 GPPGPPGPAGNPGSAGASEPGPAG 274
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.38
Identities = 31/107 (28%), Positives = 32/107 (29%), Gaps = 5/107 (4%)
Frame = +3
Query: 426 AQKKXPKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXX----GS-PXXPGKP 590
AQ + G G PGP G GG P GS P P P
Sbjct: 87 AQPQGGGGGGGGQCSTCCRPGPPGAGGTPGKPGRPGAPGAWGMPGNPGKGGSGPCHPVVP 146
Query: 591 XKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P P PP R G G P PA P PP P G
Sbjct: 147 TPCKPCPGGRPGPPGPPGRPGSDGQPGRPA-TGGGAAPRPGPPGPKG 192
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPP 724
G G P PG T G GP P P G PG P G P + PP
Sbjct: 184 GAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGPP 241
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 9/65 (13%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKR----XPXPPKRXGXXGSPXGP----APKXKXXXPPXK-P 716
G P PG P G P P PP G G P GP AP P + P
Sbjct: 181 GPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGPGNDGQPGGPGNPGAPGAVTEVPGQQGP 240
Query: 717 PPPXG 731
P P G
Sbjct: 241 PGPPG 245
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 32.7 bits (71), Expect = 0.38
Identities = 29/107 (27%), Positives = 32/107 (29%), Gaps = 8/107 (7%)
Frame = +3
Query: 435 KXPKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXX----GSPXX---PGKPX 593
K P+G G PGP G G P GSP PG P
Sbjct: 135 KCPQGLPGPAGVP-GQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPG 193
Query: 594 KXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP-PXKPPPPXG 731
G + + P P G G P P P P PP P G
Sbjct: 194 SPGKSGQRGRGLPGPSGAPGPQGPPGAPGQPGSGNAPGPAGPPGPAG 240
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXP 667
G G P PG++ + G G P P G PG P
Sbjct: 187 GAPGNPGSPGKSGQRGRGLPGPSGAPGPQGPPGAPGQP 224
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/90 (24%), Positives = 25/90 (27%)
Frame = +3
Query: 465 GFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPK 644
G P P G P G P P P + G P PP
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP-PPSRFGPPGMGGMPPPPPPG 340
Query: 645 RXGXXGSPXGPAPKXKXXXPPXKPPPPXGK 734
G P P P+ P PPPP +
Sbjct: 341 MRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 370
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 4/61 (6%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP----PXKPPPPXG 731
G+ G P + G AP + P PP G G P P + P P PP P G
Sbjct: 186 GTAGNDGTPGQPG-APGQVRTVPAPPGNPGQPGEPGAQGPPGEDGRPGNSGPQGPPGPQG 244
Query: 732 K 734
+
Sbjct: 245 E 245
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGP 682
G G P PGE + G P P G PG P AGP
Sbjct: 195 GPPGSPGAPGEPGRPGDDAPSEPLIPGEPGPQGPPGPPGQAGP 237
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
G G P PG G GP K P PP G PG P G P P G
Sbjct: 171 GTNGAPGAPGGDAPPGEAGP---KGPPGPPGSPGAPGEPGRPGDDAPSEPLIPGEPGPQG 227
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXGK 734
GSP PG+P + G P P G G P G A P P P K
Sbjct: 198 GSPGAPGEPGRPGDDAPSEPLIPGEPGPQGPPG-PPGQAGPDGQPGAPGGPGTPGSK 253
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.38
Identities = 22/90 (24%), Positives = 25/90 (27%)
Frame = +3
Query: 465 GFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPK 644
G P P G P G P P P + G P PP
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP-PPSRFGPPGMGGMPPPPPPG 350
Query: 645 RXGXXGSPXGPAPKXKXXXPPXKPPPPXGK 734
G P P P+ P PPPP +
Sbjct: 351 MRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 380
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.50
Identities = 29/107 (27%), Positives = 32/107 (29%), Gaps = 8/107 (7%)
Frame = +3
Query: 435 KXPKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXX----GSPXX---PGKPX 593
K P+G G PGP G G P GSP PG P
Sbjct: 135 KCPQGLPGPAGAP-GQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPG 193
Query: 594 KXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP-PXKPPPPXG 731
G + + P P G G P P P P PP P G
Sbjct: 194 SPGKSGQRGRGLPGPSGAPGSQGPPGAPGQPGSGNAPGPAGPPGPAG 240
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.50
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 7/88 (7%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXP-------XPP 641
PGP G G P G+P PG P K P K P PP
Sbjct: 108 PGPPGVAGNPGKPGKPGKP--------GAPGNPGAPGKGAAVPCEAKTPPPCKPCPAGPP 159
Query: 642 KRXGXXGSPXGPAPKXKXXXPPXKPPPP 725
G G P GPA P P PP
Sbjct: 160 GPPGPDG-PAGPAGPDGEAGSPAAPSPP 186
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSP 668
GSP PGKP G K P PP + G G P
Sbjct: 471 GSPGTPGKPGLPGRNGQSCKSIPGPPGQPGVMGVP 505
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
RG+ G+P G+ G GP P PP + G PG P G
Sbjct: 561 RGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQDGFPGLPGQKG 604
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G+ G+P PG G + P PP + G PG P G
Sbjct: 700 GLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKG 741
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQ 685
G+ GVP GET G G P P + G PG P AG Q
Sbjct: 1055 GLPGVPGFKGETGLPGYGQ------PGQPGEKGLPGIPGKAGRQ 1092
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
+G+ G+P PG+ + GP P K G PG P G
Sbjct: 1254 KGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKG 1296
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/61 (26%), Positives = 21/61 (34%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXGX 733
G G+P PG + G + P P K G PG G + + PP
Sbjct: 435 GPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSL 494
Query: 734 N 736
N
Sbjct: 495 N 495
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
RG+ G+P G+ G GP P PP + G PG P G
Sbjct: 560 RGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQDGFPGLPGQKG 603
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G+ G+P PG G + P PP + G PG P G
Sbjct: 699 GLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKG 740
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQ 685
G+ GVP GET G G P P + G PG P AG Q
Sbjct: 1054 GLPGVPGFKGETGLPGYGQ------PGQPGEKGLPGIPGKAGRQ 1091
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
+G+ G+P PG+ + GP P K G PG P G
Sbjct: 1253 KGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKG 1295
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/61 (26%), Positives = 21/61 (34%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXGX 733
G G+P PG + G + P P K G PG G + + PP
Sbjct: 434 GPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSL 493
Query: 734 N 736
N
Sbjct: 494 N 494
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 32.3 bits (70), Expect = 0.50
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 4/90 (4%)
Frame = +3
Query: 474 RXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXP---GKPXKXG-XAPXXXKRXPXPP 641
R PGP G G P G+P P G P G P PP
Sbjct: 183 RGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPP 242
Query: 642 KRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G G P GP PP PP P G
Sbjct: 243 GPKGAPG-PDGPPGADGQSGPPG-PPGPAG 270
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPP 725
G+P PGKP + G AP PP +P P K PP P PP
Sbjct: 106 GAPGKPGKPGRPG-APGTPGTPGKPPVAPCEPTTP--PPCKPCPQGPPGPPGPP 156
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
RG+ G+P G+ G GP P PP + G PG P G
Sbjct: 560 RGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQDGFPGLPGQKG 603
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G+ G+P PG G + P PP + G PG P G
Sbjct: 699 GLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKG 740
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQ 685
G+ GVP GET G G P P + G PG P AG Q
Sbjct: 1054 GLPGVPGFKGETGLPGYGQ------PGQPGEKGLPGIPGKAGRQ 1091
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
+G+ G+P PG+ + GP P K G PG P G
Sbjct: 1253 KGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKG 1295
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/61 (26%), Positives = 21/61 (34%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXGX 733
G G+P PG + G + P P K G PG G + + PP
Sbjct: 434 GPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSL 493
Query: 734 N 736
N
Sbjct: 494 N 494
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
RG+ G+P G+ G GP P PP + G PG P G
Sbjct: 561 RGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQDGFPGLPGQKG 604
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G+ G+P PG G + P PP + G PG P G
Sbjct: 700 GLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKG 741
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQ 685
G+ GVP GET G G P P + G PG P AG Q
Sbjct: 1055 GLPGVPGFKGETGLPGYGQ------PGQPGEKGLPGIPGKAGRQ 1092
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
+G+ G+P PG+ + GP P K G PG P G
Sbjct: 1254 KGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKG 1296
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/61 (26%), Positives = 21/61 (34%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXGX 733
G G+P PG + G + P P K G PG G + + PP
Sbjct: 435 GPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSL 494
Query: 734 N 736
N
Sbjct: 495 N 495
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
RG+ G+P G+ G GP P PP + G PG P G
Sbjct: 597 RGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQDGFPGLPGQKG 640
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G+ G+P PG G + P PP + G PG P G
Sbjct: 736 GLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKG 777
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQ 685
G+ GVP GET G G P P + G PG P AG Q
Sbjct: 1091 GLPGVPGFKGETGLPGYGQ------PGQPGEKGLPGIPGKAGRQ 1128
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
+G+ G+P PG+ + GP P K G PG P G
Sbjct: 1290 KGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKG 1332
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/61 (26%), Positives = 21/61 (34%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXGX 733
G G+P PG + G + P P K G PG G + + PP
Sbjct: 471 GPSGIPGLPGPKGEPGYRGTPGQSIPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSL 530
Query: 734 N 736
N
Sbjct: 531 N 531
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 32.3 bits (70), Expect = 0.50
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 4/90 (4%)
Frame = +3
Query: 474 RXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXP---GKPXKXG-XAPXXXKRXPXPP 641
R PGP G G P G+P P G P G P PP
Sbjct: 183 RGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPP 242
Query: 642 KRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G G P GP PP PP P G
Sbjct: 243 GPKGAPG-PDGPPGADGQSGPPG-PPGPAG 270
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPP 725
G+P PGKP + G AP PP +P P K PP P PP
Sbjct: 106 GAPGKPGKPGRPG-APGTPGTPGKPPVAPCEPTTP--PPCKPCPQGPPGPPGPP 156
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.66
Identities = 27/90 (30%), Positives = 28/90 (31%), Gaps = 4/90 (4%)
Frame = +3
Query: 474 RXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXP---GKPXKXG-XAPXXXKRXPXPP 641
R PGP G G P G+P P G P G P PP
Sbjct: 188 RGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPP 247
Query: 642 KRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G G P GP P P PP P G
Sbjct: 248 GPKGAPG-PDGP-PGVDGQSGPPGPPGPAG 275
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/54 (35%), Positives = 22/54 (40%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPP 725
G+P PGKP + G AP PP +P P K PP P PP
Sbjct: 111 GAPGKPGKPGRPG-APGTPGTPGKPPVAPCEPTTP--PPCKPCPQGPPGPPGPP 161
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.66
Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRX-PXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G P PG P + G + P PP R G GP PK P PP P G
Sbjct: 111 GPPGPPGPPGRDGRPGAPGRPGNPGPPGRDGAL--LPGPPPKPPCQKCPPGPPGPAG 165
Score = 31.5 bits (68), Expect = 0.87
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXG-XGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPP 724
G G P PGE G G P PP G PG GP P KA PP
Sbjct: 198 GPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGPPGPQGPPGP-PGKDGQPGKAGPP 254
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPP 722
G P PG+P G P PP + P GP P P P
Sbjct: 123 GRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLPGP 175
Score = 29.1 bits (62), Expect = 4.7
Identities = 26/88 (29%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXX-GSPXXPGKPXKXGX--APXXX-KRXPXPPKRX 650
PGP G G P G P PG P G AP ++ P
Sbjct: 158 PGPPGPAGPPGPKGLPGPQGDAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKGPTGEPGK 217
Query: 651 GXXGSPXGPAPKXKXXXPPXKPPPPXGK 734
G+P GP P P PP P GK
Sbjct: 218 VINGAPPGP-PGPPGPPGPQGPPGPPGK 244
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G+P PG+P K G AP PP++ +P P + P PP P G
Sbjct: 109 GTPGKPGRPGKPG-APGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSG 163
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
+G G P PG + G GP P P G PG P +G
Sbjct: 227 QGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPGADGNPGAPGQSG 270
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G+P PG+P K G AP PP++ +P P + P PP P G
Sbjct: 76 GTPGKPGRPGKPG-APGLPGNPGHPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSG 130
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
+G G P PG + G GP P P G PG P +G
Sbjct: 194 QGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPGADGNPGAPGQSG 237
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G+P PG+P K G AP PP++ +P P + P PP P G
Sbjct: 109 GTPGKPGRPGKPG-APGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSG 163
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
+G G P PG + G GP P P G PG P +G
Sbjct: 227 QGPPGQPGQPGHDGQPGAPGPKGPNGNPGQPGADGNPGAPGQSG 270
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G+P PG+P K G AP PP++ +P P + P PP P G
Sbjct: 109 GTPGKPGRPGKPG-APGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPG 163
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG-PQKXXXXTPXKAPPP 724
G G P PG+ G GP K P PP G PG P G P + P + PP
Sbjct: 166 GEPGSPGLPGQDAAPGEPGP---KGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPP 221
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXGX 733
G G P PGE P PP + G G P G Q +P + P P G
Sbjct: 193 GAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPG-QPGADGSPGQ-PGPKGP 250
Query: 734 N 736
N
Sbjct: 251 N 251
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/61 (27%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP----PXKPPPPXG 731
G+P PG+P + P PP G G P P P P P P G
Sbjct: 196 GAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDG 255
Query: 732 K 734
+
Sbjct: 256 Q 256
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQ 685
+G G P PG G A+ P P G PG P AGPQ
Sbjct: 186 KGPPGPPGAPGAPGTPGEPGVPAQSEPLIP---GEPGPPGEAGPQ 227
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Frame = +2
Query: 569 PXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPP-PXG 730
P P GP P PP G PG P G K PP P G
Sbjct: 139 PITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPG 193
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G+P PG+P K G AP PP++ +P P + P PP P G
Sbjct: 109 GTPGKPGRPGKPG-APGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPG 163
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG-PQKXXXXTPXKAPPP 724
G G P PG+ G GP K P PP G PG P G P + P + PP
Sbjct: 166 GEPGSPGLPGQDAAPGEPGP---KGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPGPP 221
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXGX 733
G G P PGE P PP + G G P G Q +P + P P G
Sbjct: 193 GAPGAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPG-QPGADGSPGQ-PGPKGP 250
Query: 734 N 736
N
Sbjct: 251 N 251
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/61 (27%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP----PXKPPPPXG 731
G+P PG+P + P PP G G P P P P P P G
Sbjct: 196 GAPGTPGEPGVPAQSEPLIPGEPGPPGEAGPQGPPGSPGQPGADGSPGQPGPKGPNGPDG 255
Query: 732 K 734
+
Sbjct: 256 Q 256
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQ 685
+G G P PG G A+ P P G PG P AGPQ
Sbjct: 186 KGPPGPPGAPGAPGTPGEPGVPAQSEPLIP---GEPGPPGEAGPQ 227
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/55 (30%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Frame = +2
Query: 569 PXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPP-PXG 730
P P GP P PP G PG P G K PP P G
Sbjct: 139 PITPPPCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPG 193
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 31.5 bits (68), Expect = 0.87
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGP 682
G G+P PG + G GP P PP G PG P GP
Sbjct: 155 GQDGIPGNPGRNGEDGAPGPQGPSGPPGPP---GQPGQPGQRGP 195
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G+P PG+P K G AP PP++ +P P + P PP P G
Sbjct: 114 GTPGKPGRPGKAG-APGLPGNPGRPPQQPCEPITPPPCKPCPQGPAGPPGPPGPAG 168
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
+G G P PG + G GP P P G PG P AG
Sbjct: 232 QGPPGAPGQPGHDGQPGTPGPKGPNGNPGAPGADGNPGTPGVAG 275
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPP 719
G+P PGKP + G + P P G G P P P P
Sbjct: 201 GAPGSPGKPGEDGKSEPITPGAPGPAGPPGPQGPPGAPGQPGHDGQPGTPGP 252
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 570 PXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP 704
P PG P G P + P P + G G P P PK P
Sbjct: 217 PITPGAPGPAG--PPGPQGPPGAPGQPGHDGQPGTPGPKGPNGNP 259
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/88 (28%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Frame = +3
Query: 483 PGPXGGGG---GPXXXXXXXXXXXXXXXXXGSPXXPG-KPXKXGXAPXXXKRXPXPPKRX 650
PGP GG G GP P G +P + G P P +
Sbjct: 156 PGPPGGPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPS-PPGQPGQP 214
Query: 651 GXXGSPXGPAPKXKXXXPPXK-PPPPXG 731
G GSP P P + P PP P G
Sbjct: 215 GEPGSPGEPGPDGRAGHPGRNGPPGPPG 242
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/88 (28%), Positives = 29/88 (32%), Gaps = 5/88 (5%)
Frame = +3
Query: 483 PGPXGGGG---GPXXXXXXXXXXXXXXXXXGSPXXPG-KPXKXGXAPXXXKRXPXPPKRX 650
PGP GG G GP P G +P + G P P +
Sbjct: 156 PGPPGGPGELGGPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSAPS-PPGQPGQP 214
Query: 651 GXXGSPXGPAPKXKXXXPPXK-PPPPXG 731
G GSP P P + P PP P G
Sbjct: 215 GEPGSPGEPGPDGRAGHPGRNGPPGPPG 242
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/59 (28%), Positives = 20/59 (33%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
G G P PG + G + P P G PG AG +P P P G
Sbjct: 157 GPDGQPGAPGPNGQPGAAGTTSTNEPGSPGPAGPPGPAGPAGEDAAAPESPPGPPGPPG 215
Score = 29.1 bits (62), Expect = 4.7
Identities = 25/88 (28%), Positives = 28/88 (31%), Gaps = 4/88 (4%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PG G GP G P PG + G A P P G G
Sbjct: 135 PGADGDAAGPGEAGPAGPAGPPGPD--GQPGAPGPNGQPGAAGTTSTNEPGSPGPAGPPG 192
Query: 663 SPXGPAPKX----KXXXPPXKPPPPXGK 734
P GPA + + P PP P GK
Sbjct: 193 -PAGPAGEDAAAPESPPGPPGPPGPPGK 219
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPP 724
G G P GE K G GP P P + G PG P G K +A P
Sbjct: 219 GPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGRAGAP 276
Score = 28.3 bits (60), Expect = 8.1
Identities = 27/95 (28%), Positives = 31/95 (32%)
Frame = +3
Query: 441 PKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXX 620
P G G G PGP G G P G P PG P + G
Sbjct: 205 PPGDGGPPG----QPGPDGPPGAPGNAGEDGKPGDQGPR--GPPGIPGAPGQPGR----- 253
Query: 621 KRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPP 725
P PP G + GPA + P +P PP
Sbjct: 254 ---PGPPGEPGTYKTEVGPAGR---AGAPGRPGPP 282
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Frame = +2
Query: 554 GVXGVPXXPGE--TXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQ----KXXXXTPXKA 715
G G P PGE T K GP P P G PG P AGP K P
Sbjct: 249 GQPGRPGPPGEPGTYKTEVGPAGRAGAPGRP---GPPGQPGPAGPPGENGKGGGQGPSGL 305
Query: 716 PPPXG 730
P P G
Sbjct: 306 PGPPG 310
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPP 724
G G P GE K G GP P P + G PG P G K +A P
Sbjct: 200 GPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGRAGAP 257
Score = 28.3 bits (60), Expect = 8.1
Identities = 27/95 (28%), Positives = 31/95 (32%)
Frame = +3
Query: 441 PKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXX 620
P G G G PGP G G P G P PG P + G
Sbjct: 186 PPGDGGPPG----QPGPDGPPGAPGNAGEDGKPGDQGPR--GPPGIPGAPGQPGR----- 234
Query: 621 KRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPP 725
P PP G + GPA + P +P PP
Sbjct: 235 ---PGPPGEPGTYKTEVGPAGR---AGAPGRPGPP 263
Score = 28.3 bits (60), Expect = 8.1
Identities = 24/65 (36%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Frame = +2
Query: 554 GVXGVPXXPGE--TXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQ----KXXXXTPXKA 715
G G P PGE T K GP P P G PG P AGP K P
Sbjct: 230 GQPGRPGPPGEPGTYKTEVGPAGRAGAPGRP---GPPGQPGPAGPPGENGKGGGQGPSGL 286
Query: 716 PPPXG 730
P P G
Sbjct: 287 PGPPG 291
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PG GGGP G P PG P G + P P R G G
Sbjct: 164 PGQDSFGGGPGPAGPTGPTGDAGAP--GQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPQG 221
Query: 663 SPXGP 677
GP
Sbjct: 222 PAGGP 226
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 630 PXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P PP G+P P P P PPPP G
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPG 597
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/93 (30%), Positives = 29/93 (31%), Gaps = 12/93 (12%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPX--------- 635
PGP G GG P G+P PG K AP K P
Sbjct: 109 PGPPGPGGSPGKPGKPGKP--------GAPGAPGAAGKGASAPCEAKTPPPCQPCPAGPP 160
Query: 636 -PPKRXGXXG--SPXGPAPKXKXXXPPXKPPPP 725
PP G G P G A PP P PP
Sbjct: 161 GPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPP 193
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAK-KXPXPPKKXGXPGXPXWAGP 682
G G P PG K P AK P P G PG P GP
Sbjct: 125 GKPGAPGAPGAAGKGASAPCEAKTPPPCQPCPAGPPGPPGPDGP 168
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +2
Query: 563 GVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGP 682
G P PG G GP P P G PG P AGP
Sbjct: 158 GPPGPPGPDGPAGPAGPDGEAGSPAAPSPPGPPGPPGPAGP 198
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
+G G P PG + G GP P P G PG P AG
Sbjct: 227 QGQPGAPGQPGHDGQPGAPGPKGPNGNPGAPGADGNPGAPGQAG 270
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 570 PXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP 704
P PG P G P + P P + G G P P PK P
Sbjct: 212 PITPGAPGPAG--PAGPQGQPGAPGQPGHDGQPGAPGPKGPNGNP 254
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
+G G P PG + G GP P P G PG P AG
Sbjct: 227 QGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGADGNPGAPGQAG 270
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 570 PXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP 704
P PG P G P + P P + G G P P PK P
Sbjct: 212 PITPGAPGPAG--PAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNP 254
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
+G G P PG + G GP P P G PG P AG
Sbjct: 227 QGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGADGNPGAPGQAG 270
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 570 PXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP 704
P PG P G P + P P + G G P P PK P
Sbjct: 212 PITPGAPGPAG--PAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNP 254
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G G P PG+ + G G P PP G PG AG
Sbjct: 198 GPNGEPGAPGKDGEKGKGEPGPAGPPGPPGPGGPPGDAGGAG 239
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 570 PXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P P P G AP P PP P G PP PPPP G
Sbjct: 611 PPPPPPPQSFGMAPISSAAPPPPPPPP-----PMGLPAVGAGAPPPPPPPPPSG 659
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 570 PXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPPXG 731
P P P G AP P PP P G PP PPPP G
Sbjct: 437 PPPPPPPQSFGMAPISSAAPPPPPPPP-----PMGLPAVGAGAPPPPPPPPPSG 485
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
+G G P PG + G GP P P G PG P AG
Sbjct: 227 QGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGADGNPGAPGQAG 270
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 570 PXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP 704
P PG P G P + P P + G G P P PK P
Sbjct: 212 PITPGAPGPAG--PAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNP 254
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
+G G P PG + G GP P P G PG P AG
Sbjct: 227 QGPPGAPGQPGHDGQPGAPGPKGPNGNPGAPGADGNPGAPGQAG 270
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +3
Query: 570 PXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP 704
P PG P G P + P P + G G P P PK P
Sbjct: 212 PITPGAPGPAG--PAGPQGPPGAPGQPGHDGQPGAPGPKGPNGNP 254
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP----PXKPPPPXG 731
G P PG P G + P P R G G GP P PP P G
Sbjct: 182 GQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGGAGSPGPQGPPGPSG 241
Query: 732 K 734
+
Sbjct: 242 Q 242
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/59 (28%), Positives = 22/59 (37%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
G G P PG G G ++ P P + G PG GP + +P P G
Sbjct: 179 GSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGPA--GGPGQPGHSGGAGSPGPQG 235
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
G G P G G GP P P G PG P G + P P P G
Sbjct: 155 GQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPG 214
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGP 682
G GVP PG G P ++ PP PG P GP
Sbjct: 108 GKPGVPGAPGRPGTPGRPPIVCEEQDVPPCNPCPPGPPGPQGP 150
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPP 725
G P PG+P G P + PP G P GP P +P P
Sbjct: 111 GVPGAPGRPGTPGRPPIVCEEQDVPPCNPCPPG-PPGPQGPTGNSGQPGRPGNP 163
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G G P PG+ + G G A P P G PG AG
Sbjct: 190 GAPGAPGAPGQDGQRGTGLPGAPGAPGPQGPSGNPGQDGAAG 231
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/95 (27%), Positives = 33/95 (34%)
Frame = +3
Query: 441 PKGXGXXXGFXRXXPGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXX 620
P G G + PGP GG GGP G P PG+P P
Sbjct: 161 PAGPSGDNG-RKGPPGPPGGPGGP-----------GEGGDGGRPGNPGRP-----GPAGP 203
Query: 621 KRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPPP 725
+ P + G G P P P+ + P +P P
Sbjct: 204 RGEPGTEYKPGQPGRPGPPGPRGE-AGPAGQPGSP 237
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/87 (26%), Positives = 24/87 (27%), Gaps = 4/87 (4%)
Frame = +3
Query: 483 PGPXGG----GGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRX 650
PGP G G P G+P G P G AP P P
Sbjct: 179 PGPEGAPGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDGAPGNPG-APGQVTETPGTPGPA 237
Query: 651 GXXGSPXGPAPKXKXXXPPXKPPPPXG 731
G G P P P P P G
Sbjct: 238 GAAGPPGPPGPAGNPGSAGASEPGPAG 264
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/83 (27%), Positives = 25/83 (30%), Gaps = 1/83 (1%)
Frame = +3
Query: 486 GPXGGGGGPXXXXXXXXXXXXXXXXX-GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
G GGGGG G+P GK G A + P
Sbjct: 102 GEGGGGGGSCCSCGIGAAGPAGAPGKDGAPGEDGKAGNPGTAGSDAEAAAAPTASDFCFD 161
Query: 663 SPXGPAPKXKXXXPPXKPPPPXG 731
P GPA PP PP P G
Sbjct: 162 CPPGPAGPPGGPGPPG-PPGPEG 183
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 545 EXRGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
E R V G P G+ G GP P P + G PG P AG
Sbjct: 223 ESREVPGAPGPAGQPGSQGEPGPSGPDGRPGQPGQAGQPGGPGDAG 268
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPP 719
G P PG+P K G P P + G G GP P P
Sbjct: 200 GGPGQPGRPGKDGQRGKGSAGAPGAPGKAGPAGPAGGPGNNGSAGTPGPAGP 251
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G G P PG+ P A P PP G PG P AG
Sbjct: 259 GNVGAPGAPGQVVDVPGAPGPAGP-PGPPGPSGAPGHPGQAG 299
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -3
Query: 681 GPAXXGXPGXPXFLGGLGXFXAXXGP-XPFFXVSPGXXGTP 562
GP G PG P GG G GP P +PG GTP
Sbjct: 108 GPGGLGTPGGPGTPGGPGNPGGLGGPGNPGGPGTPGGPGTP 148
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 630 PXPPKRXGXXGS-PXGPAPKXKXXXPPXKPPPP 725
P PP++ GS P P P PP + PPP
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPP 157
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPP 724
G G P PG G GP + P G PG P G TP A PP
Sbjct: 204 GEPGAPGTPGGNALPGPPGPPGPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPP 261
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/55 (30%), Positives = 20/55 (36%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAP 718
G G P PG+ + P A P PP G PG P G + P P
Sbjct: 237 GNPGAPGVPGQVIEVPGTPGPAGP-PGPPGPIGPPGQPGAPGSSQPGPQGPPGDP 290
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PGP G G P PG+P G A + P P G G
Sbjct: 181 PGPKGPPGVNGQPGAPGQDGNPGQDAPSEPLVPGEPGAPGEA--GPQGPPGQPGTPGQNG 238
Query: 663 SPXGPAPKXKXXXP 704
P P PK P
Sbjct: 239 QPGQPGPKGPSGQP 252
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQ 685
GV G P PG+ G + P P G PG P AGPQ
Sbjct: 188 GVNGQPGAPGQDGNPG------QDAPSEPLVPGEPGAPGEAGPQ 225
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +3
Query: 579 PGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXPPXKPPP 722
P KP G P + P P G G P GP + P K PP
Sbjct: 142 PCKPCPQG--PPGVQGPPGPAGDAGLDGQPGGPGQDGQPGQPGPKGPP 187
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PG GG G P G PG P P PP G G
Sbjct: 133 PGEAGGAGPPGPPGPDGNPGAPGND--GEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPG 190
Query: 663 SPXGPAPKXKXXXPPXKPPPPXG 731
GP P P PP P G
Sbjct: 191 GGSGPGPAG-----PAGPPGPDG 208
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX----GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAP 718
+G G P PG+ G GP A P P + G PG P + P +A
Sbjct: 167 QGDAGAPGAPGQGSGAGAPGPAGPKGASGAPGNPGQAGAPGQPGADAQSESIPGAPGQAG 226
Query: 719 P 721
P
Sbjct: 227 P 227
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
G G P PG+ G GP A P G PG P AG
Sbjct: 235 GSPGAPGGPGQPGAPGQKGPSGAPGQPGADGNPGAPGQPGQAG 277
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +3
Query: 564 GSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGP 677
G+P PG P + G R P G G+P GP
Sbjct: 194 GTPGLPGPPGEDGPVGQNGTRGQGQPGPVGAPGAPGGP 231
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXP 667
G G+P PGE G + P P G PG P
Sbjct: 194 GTPGLPGPPGEDGPVGQNGTRGQGQPGPVGAPGAPGGP 231
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXP---PKKXGXPGXPXWAGPQKXXXXTPXKAP 718
+G G P PG+T GP P P P G G P G TP A
Sbjct: 184 KGPSGAPGVPGQTGGASLPGPPGPAGPPGPSGQPGSNGNAGAPGAPGQVVDVPGTPGPAG 243
Query: 719 PP 724
PP
Sbjct: 244 PP 245
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = +3
Query: 483 PGPXGGGGGPXXXXXXXXXXXXXXXXXGSPXXPGKPXKXGXAPXXXKRXPXPPKRXGXXG 662
PG GG G P G PG P P PP G G
Sbjct: 133 PGEAGGAGPPGPPGPDGNPGAPGND--GEAGSPGTRSISSPGPAGPAGPPGPPGPDGAPG 190
Query: 663 SPXGPAPKXKXXXPPXKPPPPXG 731
GP P P PP P G
Sbjct: 191 GGSGPGPAG-----PAGPPGPDG 208
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG 679
+G G P PG++ G GP A P P G PG P G
Sbjct: 210 QGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGNAGTPGTPGAPG 253
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXG-XGPXXAKKXPXPPKKXGXPGXPXWAG 679
RG+ GVP PGE G G A P + G PG P + G
Sbjct: 727 RGLDGVPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYRG 770
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXG-XGPXXAKKXPXPPKKXGXPGXPXWAG 679
RG+ GVP PGE G G A P + G PG P + G
Sbjct: 984 RGLDGVPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYRG 1027
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXG-XGPXXAKKXPXPPKKXGXPGXPXWAG 679
RG+ GVP PGE G G A P + G PG P + G
Sbjct: 983 RGLDGVPGYPGEHGTDGLPGLPGADGQPGFVGEAGEPGTPGYRG 1026
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGP 682
RGV G P PG+ + G G P G PG P AGP
Sbjct: 176 RGVPGHPGFPGDPGEYGIG-----GRPGSDGMPGKPGDPGLAGP 214
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +2
Query: 566 VPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
+P PG++ G GP + P G PG W GP P P P G
Sbjct: 236 IPGPPGDSGLPGPWGPPGSAGMPGEDGYAGTPGEKGWPGP--PGAPGPGGMPGPNG 289
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 563 GVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
GVP PG+ G P K P P K G PG + G
Sbjct: 215 GVPGKPGDVGPCG--PEGPKGAPGTPGKNGAPGDRGFGG 251
>Z68507-1|CAA92826.1| 337|Caenorhabditis elegans Hypothetical
protein M18.1 protein.
Length = 337
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
G G PG+ G G A P P G PG P AGP TP A P G
Sbjct: 215 GSPGPQGPPGQNGNDGQPGNDGAPGQPGQPGPDGHPGQPGNAGP----PGTPGAAGQPGG 270
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Frame = +2
Query: 551 RGVXGVPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAG---PQKXXXXTPXKAP 718
+G G P PG+ G GP P + G PG P AG + P AP
Sbjct: 152 QGPNGQPGHPGQGGSQGPAGPRGPAGDAGAPGQVGAPGNPGQAGRGGQRSHGLPGPSGAP 211
Query: 719 PPXG 730
P G
Sbjct: 212 GPQG 215
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 605 GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPP 721
GP A P PP K G G P +G P PP
Sbjct: 265 GPPGAPGRPGPPGKAGANGLPGNSGKPTKRPCNPVTKPP 303
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Frame = +3
Query: 579 PGKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPKXKXXXP----PXKPPPPXGK 734
P KP G P P P G G P P P+ P P PP P GK
Sbjct: 136 PCKPCPEG--PPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGK 189
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 5/61 (8%)
Frame = +3
Query: 564 GSPXXP--GKPXKXGXAPXXXKRXPXPPKRXGXXGSPXGPAPK---XKXXXPPXKPPPPX 728
GSP P G+P +R P PPK G P P+ + PPPP
Sbjct: 228 GSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPK 287
Query: 729 G 731
G
Sbjct: 288 G 288
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 724 GGGGFXGGXXXXFLGAGPXGXPXXPXLFGGXG 629
GGGG GG G G P P +GG G
Sbjct: 191 GGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGG 222
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G G P PG+ + G G A P + G PG P G
Sbjct: 201 GNPGQPGHPGKDGRRGHGSPGAPGRAGQPGRQGAPGNPGRPG 242
>Z70208-1|CAA94141.1| 339|Caenorhabditis elegans Hypothetical
protein F54B11.1 protein.
Length = 339
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAG 679
G+ G P + G GP P PP + G G P G
Sbjct: 265 GLMGPPGLDAQNGANGFGPPGLPGPPGPPGRPGSDGNPGVPG 306
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 563 GVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGP 682
G P PGE G G A P P + G PG P GP
Sbjct: 214 GEPGQPGEPG--GPGEPGADGRPGHPGRAGPPGPPGDNGP 251
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 599 GXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPP 724
G GP P P K G PG P G +PPP
Sbjct: 124 GPGPNGKPGKPGRPGKPGAPGLPGVPGKTTIQAPCEAASPPP 165
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 663 SPXGPAPKXKXXXPPXKPPPP 725
SP GPAP PP PPP
Sbjct: 310 SPSGPAPSIPPPRPPALAPPP 330
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = +2
Query: 566 VPXXPGETXKXGX-GPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPPXG 730
+P PG++ G GP + P G PG W GP P P P G
Sbjct: 236 IPGPPGDSGLPGPWGPPGSAGMPGEDGYAGTPGEKGWPGP--PGAPGPGGMPGPNG 289
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 663 SPXGPAPKXKXXXPPXKPPPP 725
SP GPAP PP PPP
Sbjct: 310 SPSGPAPSIPPPRPPALAPPP 330
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPPP 724
G G P PG + G A P P G PG P +G TP PP
Sbjct: 185 GHPGSPGNPGRGGQRSRGTPGASGRPGPQGPAGAPGQPGRSG----GAGTPGPQGPP 237
>AC024778-1|AAF60567.1| 393|Caenorhabditis elegans Collagen protein
115 protein.
Length = 393
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +2
Query: 554 GVXGVPXXPGETXKXGXGPXXAKKXPXPPKKXGXPGXPXWAGPQKXXXXTPXKAPP 721
G G P GET G P PP G G P G K PP
Sbjct: 256 GEQGPPGLDGETIDGEDGSPGLPGPPGPPGPPGLHGSPGSYGESKEEEIAGPPGPP 311
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,834,089
Number of Sequences: 27780
Number of extensions: 170118
Number of successful extensions: 2600
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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