Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_K22
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275...    29   4.0  
01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728     29   4.0  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.2  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     28   9.2  

>07_03_1691 -
           28726307-28726323,28726588-28726953,28727483-28727567,
           28728255-28728387,28729793-28730328
          Length = 378

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 496 GRVAGVFP*APPPDEHHKNRRSSQXWRNPTGL 591
           G  AG  P  PPP  HH+  RS   +R P  L
Sbjct: 37  GGGAGPTPPPPPPPPHHRRARSEVAFRFPDDL 68


>01_06_0713 - 31402534-31403131,31403281-31403430,31403526-31403728
          Length = 316

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
 Frame = +3

Query: 336 PLPRSLTRCARSFGCGERYQLTQRR--------*YGYPQNQGITQERTCEXKASKRPGTV 491
           P PR   RC+ S GC  R Q+ + R         Y +  N    Q ++    ASK     
Sbjct: 115 PYPRGYYRCSSSKGCPARKQVERSRADPTVLLVTYSFEHNHPWPQPKSSSCHASKSSPRS 174

Query: 492 KRPRCWRFSIGSAP*RASQKSTLKSXVAKPDRTXKIQAFP 611
             P+    + G  P  A  +S+  + +  P+   + ++ P
Sbjct: 175 TAPKPEPVADGQHPEPAENESSASAELEVPEPEPEQESEP 214


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 285 NESAN---ARGEAVCVLGALPLPRSLTRCAR 368
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 336 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEXKASKRPGTV 491
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,764,733
Number of Sequences: 37544
Number of extensions: 394859
Number of successful extensions: 1048
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)