Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_K22
         (932 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126114-1|AAI26115.1|  579|Homo sapiens cell division cycle 40 ...    33   1.1  
BC117145-1|AAI17146.1|  579|Homo sapiens cell division cycle 40 ...    33   1.1  
AL671518-2|CAI13322.1|  579|Homo sapiens cell division cycle 40 ...    33   1.1  
AL671518-1|CAI13321.1|  539|Homo sapiens cell division cycle 40 ...    33   1.1  
AL445068-1|CAI22519.1|  539|Homo sapiens cell division cycle 40 ...    33   1.1  
AK222721-1|BAD96441.1|  579|Homo sapiens pre-mRNA splicing facto...    33   1.1  
AF061241-1|AAC25166.1|  542|Homo sapiens splicing factor hPRP17 ...    33   1.1  
AF038392-1|AAC39730.1|  579|Homo sapiens pre-mRNA splicing facto...    33   1.1  
AB208903-1|BAD92140.1|  501|Homo sapiens pre-mRNA splicing facto...    33   1.1  

>BC126114-1|AAI26115.1|  579|Homo sapiens cell division cycle 40
           homolog (S. cerevisiae) protein.
          Length = 579

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +1

Query: 529 PPDEHHKNRRSSQXWRNPT-GLXRYRRFPLEAPRALSCSXPAAYRILSAFLPREAWRFLI 705
           PP++ +  ++    W   T G+   R FPL     LSCS     ++   +  R   R  I
Sbjct: 270 PPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFI 329

Query: 706 AHAVGISVRC 735
            H+  +   C
Sbjct: 330 GHSKAVRDIC 339


>BC117145-1|AAI17146.1|  579|Homo sapiens cell division cycle 40
           homolog (S. cerevisiae) protein.
          Length = 579

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +1

Query: 529 PPDEHHKNRRSSQXWRNPT-GLXRYRRFPLEAPRALSCSXPAAYRILSAFLPREAWRFLI 705
           PP++ +  ++    W   T G+   R FPL     LSCS     ++   +  R   R  I
Sbjct: 270 PPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFI 329

Query: 706 AHAVGISVRC 735
            H+  +   C
Sbjct: 330 GHSKAVRDIC 339


>AL671518-2|CAI13322.1|  579|Homo sapiens cell division cycle 40
           homolog (S. cerevisiae) protein.
          Length = 579

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +1

Query: 529 PPDEHHKNRRSSQXWRNPT-GLXRYRRFPLEAPRALSCSXPAAYRILSAFLPREAWRFLI 705
           PP++ +  ++    W   T G+   R FPL     LSCS     ++   +  R   R  I
Sbjct: 270 PPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFI 329

Query: 706 AHAVGISVRC 735
            H+  +   C
Sbjct: 330 GHSKAVRDIC 339


>AL671518-1|CAI13321.1|  539|Homo sapiens cell division cycle 40
           homolog (S. cerevisiae) protein.
          Length = 539

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +1

Query: 529 PPDEHHKNRRSSQXWRNPT-GLXRYRRFPLEAPRALSCSXPAAYRILSAFLPREAWRFLI 705
           PP++ +  ++    W   T G+   R FPL     LSCS     ++   +  R   R  I
Sbjct: 270 PPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFI 329

Query: 706 AHAVGISVRC 735
            H+  +   C
Sbjct: 330 GHSKAVRDIC 339


>AL445068-1|CAI22519.1|  539|Homo sapiens cell division cycle 40
           homolog (S. cerevisiae) protein.
          Length = 539

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +1

Query: 529 PPDEHHKNRRSSQXWRNPT-GLXRYRRFPLEAPRALSCSXPAAYRILSAFLPREAWRFLI 705
           PP++ +  ++    W   T G+   R FPL     LSCS     ++   +  R   R  I
Sbjct: 270 PPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFI 329

Query: 706 AHAVGISVRC 735
            H+  +   C
Sbjct: 330 GHSKAVRDIC 339


>AK222721-1|BAD96441.1|  579|Homo sapiens pre-mRNA splicing factor
           17 variant protein.
          Length = 579

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +1

Query: 529 PPDEHHKNRRSSQXWRNPT-GLXRYRRFPLEAPRALSCSXPAAYRILSAFLPREAWRFLI 705
           PP++ +  ++    W   T G+   R FPL     LSCS     ++   +  R   R  I
Sbjct: 270 PPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFI 329

Query: 706 AHAVGISVRC 735
            H+  +   C
Sbjct: 330 GHSEAVRDIC 339


>AF061241-1|AAC25166.1|  542|Homo sapiens splicing factor hPRP17
           protein.
          Length = 542

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +1

Query: 529 PPDEHHKNRRSSQXWRNPT-GLXRYRRFPLEAPRALSCSXPAAYRILSAFLPREAWRFLI 705
           PP++ +  ++    W   T G+   R FPL     LSCS     ++   +  R   R  I
Sbjct: 233 PPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFI 292

Query: 706 AHAVGISVRC 735
            H+  +   C
Sbjct: 293 GHSKAVRDIC 302


>AF038392-1|AAC39730.1|  579|Homo sapiens pre-mRNA splicing factor
           protein.
          Length = 579

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +1

Query: 529 PPDEHHKNRRSSQXWRNPT-GLXRYRRFPLEAPRALSCSXPAAYRILSAFLPREAWRFLI 705
           PP++ +  ++    W   T G+   R FPL     LSCS     ++   +  R   R  I
Sbjct: 270 PPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFI 329

Query: 706 AHAVGISVRC 735
            H+  +   C
Sbjct: 330 GHSKAVRDIC 339


>AB208903-1|BAD92140.1|  501|Homo sapiens pre-mRNA splicing factor
           17 variant protein.
          Length = 501

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = +1

Query: 529 PPDEHHKNRRSSQXWRNPT-GLXRYRRFPLEAPRALSCSXPAAYRILSAFLPREAWRFLI 705
           PP++ +  ++    W   T G+   R FPL     LSCS     ++   +  R   R  I
Sbjct: 269 PPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFI 328

Query: 706 AHAVGISVRC 735
            H+  +   C
Sbjct: 329 GHSKAVRDIC 338


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,523,652
Number of Sequences: 237096
Number of extensions: 2060259
Number of successful extensions: 6409
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6409
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)