Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_K21
         (923 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1188 + 26801833-26802225                                         30   3.0  
10_08_0223 - 15986763-15987575                                         29   5.2  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.9  
12_02_0615 + 21242819-21243201,21244510-21244630,21244728-212448...    28   9.1  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.1  

>12_02_1188 + 26801833-26802225
          Length = 130

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -1

Query: 701 GXKGGQVSGKRQGRNRRAHEGXSRGETPGIFIVLSG 594
           G  GG  SGKR      AHEG   G  P +++V  G
Sbjct: 30  GGGGGGSSGKRSSSAAAAHEGVPEGHVP-VYVVGEG 64


>10_08_0223 - 15986763-15987575
          Length = 270

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
 Frame = -1

Query: 704 EGXKGGQVSGKRQGRNRRAHEGXSRGE-TPGIFIVLSGFATS--DLSVDFCDARQGGGA- 537
           EG  GG   G   G    A  G  +G    G  I ++   +S  D +  + DA  GGG  
Sbjct: 138 EGGGGGGGGGSNGGSGYGAGAGVGQGAGESGSSIAMAPSPSSGGDYNGGYADAAGGGGGG 197

Query: 536 ---YGKTPATRPFYGSWPFAG 483
              +G  PA  P YG    AG
Sbjct: 198 GGGHGGGPAASPSYGVGAGAG 218


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 351 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 506
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>12_02_0615 +
           21242819-21243201,21244510-21244630,21244728-21244847,
           21245015-21245245,21245365-21245862
          Length = 450

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -1

Query: 707 PEGXKGGQVSGKRQGRNRRAHEGXSRGETPGIFIVLSGFATSDLSVDFCDA-RQGGGAYG 531
           P G KGG   G   G+ R + E     E   + ++    A    SV  C   R+GGG +G
Sbjct: 9   PSGCKGGGGGGGGVGKKRGSGEEERERERQQLSVLEVLLAAVRRSVVACRVEREGGGGWG 68

Query: 530 K 528
           +
Sbjct: 69  E 69


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 300 NESAN---ARGEAVCVLGALPLPRSLTRCAR 383
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,567,924
Number of Sequences: 37544
Number of extensions: 465607
Number of successful extensions: 1189
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)