Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_K20
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-45|CAC70123.2| 222|Caenorhabditis elegans Hypothetical p... 80 2e-15
U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical p... 36 0.054
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr... 36 0.054
U64599-2|ABB88205.1| 420|Caenorhabditis elegans Unidentified vi... 34 0.17
U64599-1|AAB04560.3| 426|Caenorhabditis elegans Unidentified vi... 34 0.17
AF016425-1|AAD34668.1| 458|Caenorhabditis elegans Hypothetical ... 30 2.7
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z99281-45|CAC70123.2| 222|Caenorhabditis elegans Hypothetical
protein Y57G11C.34 protein.
Length = 222
Score = 80.2 bits (189), Expect = 2e-15
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 2/151 (1%)
Frame = +3
Query: 330 NKVINHVMEKGNKRLARQLVEKAFENIKRKQIERYHLASTPEEKAKIELNPKDILYKAVE 509
+K+I + G K +R+ V A E IKR+Q + + AS EEK IEL+P + K ++
Sbjct: 72 DKLIRVCTKDGEKETSRKNVLSALEIIKRRQYKAWAKASE-EEKKSIELDPFLVAKKGIK 130
Query: 510 NCKPLLQLQPIKRGGITYQVPGPITEKRSLFLAIKWL--LXDNR*KRKNCSFP*AVCLGT 683
NC PL++LQ + RGG TYQVP PI E + F A+K + + R K F +
Sbjct: 131 NCHPLMKLQGVTRGGTTYQVPFPIEEPEAEFRAMKMMRDICRVRSKHGETHFKDILATEL 190
Query: 684 P*SFKPYWXSCKEKPDXXRQXEANRAFAXXR 776
+ + + + K + + EANRA+A R
Sbjct: 191 LAASQNEGSTIQAKQELHKTCEANRAYAHYR 221
>U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical
protein ZK328.7b protein.
Length = 1098
Score = 35.5 bits (78), Expect = 0.054
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 372 LARQLVEKAFENIKRK-----QIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQ 536
LA+Q +K+FEN ++ ++ R L S P + L D+LY AVE C L
Sbjct: 424 LAKQSKDKSFENFRQHIENLVEMLRNQLQSFPFGLDYLSLFSSDLLYSAVEQCFDFYPLV 483
Query: 537 PIK 545
PIK
Sbjct: 484 PIK 486
>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical
protein ZK328.7a protein.
Length = 1332
Score = 35.5 bits (78), Expect = 0.054
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 372 LARQLVEKAFENIKRK-----QIERYHLASTPEEKAKIELNPKDILYKAVENCKPLLQLQ 536
LA+Q +K+FEN ++ ++ R L S P + L D+LY AVE C L
Sbjct: 424 LAKQSKDKSFENFRQHIENLVEMLRNQLQSFPFGLDYLSLFSSDLLYSAVEQCFDFYPLV 483
Query: 537 PIK 545
PIK
Sbjct: 484 PIK 486
>U64599-2|ABB88205.1| 420|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 6, isoform b
protein.
Length = 420
Score = 33.9 bits (74), Expect = 0.17
Identities = 26/106 (24%), Positives = 46/106 (43%)
Frame = -1
Query: 469 ILAFSSGVEAKWYRSICFLLIFSNAFSTS*RANRLLPFSITWLMTLLXERIKVNGRRFRN 290
I + S A+WY S+C ++IF ++ + + L E K + R RN
Sbjct: 171 IAHWPSPPHAQWYISVCSVMIFI-------LPGLVIFYCYYHVFCKLREAAKGSRRLHRN 223
Query: 289 RRWLHRYSCSVLQIRICNEFHLIFFSKYWILIIVWKACRLRIISNL 152
+R Y ++ FHL+ +S +W+ + R+RI + L
Sbjct: 224 KRSRSSYQRVTRSVQRVVLFHLLCWSPFWLFNLFSAIFRVRITTQL 269
>U64599-1|AAB04560.3| 426|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 6, isoform a
protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.17
Identities = 26/106 (24%), Positives = 46/106 (43%)
Frame = -1
Query: 469 ILAFSSGVEAKWYRSICFLLIFSNAFSTS*RANRLLPFSITWLMTLLXERIKVNGRRFRN 290
I + S A+WY S+C ++IF ++ + + L E K + R RN
Sbjct: 171 IAHWPSPPHAQWYISVCSVMIFI-------LPGLVIFYCYYHVFCKLREAAKGSRRLHRN 223
Query: 289 RRWLHRYSCSVLQIRICNEFHLIFFSKYWILIIVWKACRLRIISNL 152
+R Y ++ FHL+ +S +W+ + R+RI + L
Sbjct: 224 KRSRSSYQRVTRSVQRVVLFHLLCWSPFWLFNLFSAIFRVRITTQL 269
>AF016425-1|AAD34668.1| 458|Caenorhabditis elegans Hypothetical
protein F59A7.1 protein.
Length = 458
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 610 IAKNNDLFSVIGPGTWYVIPPLLMGCNCNNGLQFSTALYKMSLGFN 473
I K ND +S+I W V P G NG S Y M L ++
Sbjct: 399 ITKTNDKYSIID---WQVYPASFNGILTGNGFTLSPVTYSMELQYD 441
>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical protein
W09D10.2 protein.
Length = 1335
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 259 VLQIRICNEFHLIFFSKYWILIIVW 185
V Q+ I N FHL F +YW + W
Sbjct: 1182 VTQLIIVNTFHLALFVQYWTWPMFW 1206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,429,269
Number of Sequences: 27780
Number of extensions: 366602
Number of successful extensions: 1049
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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