Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_K18
(1377 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0040 - 7646525-7647775 38 0.014
07_03_0091 + 13312904-13313647 36 0.099
05_03_0039 - 7621613-7622695 35 0.13
07_03_0089 - 13300902-13301645 35 0.17
04_03_0904 + 20717005-20718087 35 0.17
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 35 0.17
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 32 1.2
04_04_1104 - 30928475-30928501,30929008-30929110,30929287-309293... 31 2.1
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 29 6.5
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 6.5
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620... 29 6.5
02_05_0686 - 30900748-30902167,30903442-30904742 29 7.1
01_02_0007 + 10132380-10133201 29 8.6
>05_03_0040 - 7646525-7647775
Length = 416
Score = 38.3 bits (85), Expect = 0.014
Identities = 37/182 (20%), Positives = 53/182 (29%), Gaps = 3/182 (1%)
Frame = +2
Query: 20 PPPQXEXXXXXXXXXPQTXKQRXXXXTXKKXXPXXKAQNXXXTXPXPTXXHNPRPXQQXX 199
P P+ E K + K P + + P P P+P +
Sbjct: 224 PKPKPEPKPKPEPKPYPEPKPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPKPEPK 283
Query: 200 GXXRXGXTXEEPREKXXXXKPKNKPXXNXRXXTXPXXXRXHPRXNPX-IPXKKNQPTKTQ 376
+ E E KP+ KP P + P+ P P K P
Sbjct: 284 PHPKPEPKPEPKPEPKPEPKPEPKPEPKPEPEPKPEP-KPEPKPEPKPYPEPKPDPKPEP 342
Query: 377 NEXRTRRXXXKXXXNXKKPXEGPXXPXXXTXPKX-PKTXXKP-PQXXPRPXPXXGKNSPP 550
+ K K + P PK PK +P P+ P+P P +PP
Sbjct: 343 KPHPEPKPEPKPQPEPKPEPKPEPKPEPKPEPKPEPKPYPEPKPEPKPKPKPEPKPEAPP 402
Query: 551 XK 556
K
Sbjct: 403 KK 404
Score = 36.7 bits (81), Expect = 0.043
Identities = 37/166 (22%), Positives = 52/166 (31%), Gaps = 2/166 (1%)
Frame = +2
Query: 107 KXXPXXKAQNXXXTXPXPTXXHNPRPXQQXXGXXRXGXTXEEPREKXXXXKPKNKPXXNX 286
K P K + P P P+P + + E E KP+ KP
Sbjct: 219 KPEPKPKPKPEPKPKPEPKPYPEPKPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKP 278
Query: 287 RXXTXPXXXRXHPRXNPXIPXKKNQPTKTQNEXRTRRXXXKXXXNXKKPXEGPXXPXXXT 466
+ P HP+ P K + + E + KP P P
Sbjct: 279 KPEPKP-----HPKPEPKPEPKPEPKPEPKPEPKPEPKPEPEPKPEPKPEPKP-EPKPYP 332
Query: 467 XPK-XPKTXXKP-PQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHPQ 598
PK PK KP P+ P P P + P K + + P P+
Sbjct: 333 EPKPDPKPEPKPHPEPKPEPKPQP-EPKPEPKPEPKPEPKPEPKPE 377
Score = 35.1 bits (77), Expect = 0.13
Identities = 40/171 (23%), Positives = 54/171 (31%), Gaps = 7/171 (4%)
Frame = +2
Query: 107 KXXPXXKAQNXXXTXPXPTXXHNPRPXQQXXGXXRXGXTXEEPREKXXXXKPKNKPXXNX 286
K P K + P P P+P + E E KP+ KP
Sbjct: 105 KPYPEPKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPEPKPEPKPEPKPEPKPEPKPKPEP 164
Query: 287 RXXTXP-----XXXRXHPRXNPXIPXKKNQPTKTQNEXRTRRXXXKXXXNXKKPXEGP-X 448
+ P + HP P P K +P K E + KP P
Sbjct: 165 KPHPEPKPDPKPEPKPHPEPEPK-PEPKPEP-KPHPEPEPKPEPKPEPKPEPKPEPKPEP 222
Query: 449 XPXXXTXPKXPKTXXKP-PQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHPQ 598
P PK PK KP P+ P+P P K P + + + P P+
Sbjct: 223 KPKPKPEPK-PKPEPKPYPEPKPKPEP---KPEPKPEPKPEPKPEPKPEPK 269
Score = 35.1 bits (77), Expect = 0.13
Identities = 37/163 (22%), Positives = 53/163 (32%), Gaps = 2/163 (1%)
Frame = +2
Query: 116 PXXKAQNXXXTXPXPTXXHNPRPXQQXXGXXRXGXTXEEPREKXXXXKPKNKPXXNXRXX 295
P K P P P P + + E E KPK KP +
Sbjct: 176 PEPKPHPEPEPKPEPKPEPKPHPEPEPKPEPKPEPKPEPKPEPKPEPKPKPKPEPKPKPE 235
Query: 296 TXPXXXRXHPRXNPXIPXKKNQPTKTQNEXRTRRXXXKXXXNXKKPXEGPXXPXXXTXPK 475
P P+ P P K +P K + + + KP P P PK
Sbjct: 236 PKP-YPEPKPKPEPK-PEPKPEP-KPEPKPEPKPEPKPEPKPEPKPKPEP-KPHPKPEPK 291
Query: 476 -XPKTXXKP-PQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHPQ 598
PK KP P+ P+P P + P + + + P+P+
Sbjct: 292 PEPKPEPKPEPKPEPKPEPKP-EPEPKPEPKPEPKPEPKPYPE 333
Score = 34.7 bits (76), Expect = 0.17
Identities = 42/195 (21%), Positives = 58/195 (29%), Gaps = 3/195 (1%)
Frame = +2
Query: 20 PPPQXEXXXXXXXXXPQTXKQRXXXXTXKKXXPXXKAQNXXXTXPXPTXXHNPRPXQQXX 199
P P+ E K + + P K + P P P P
Sbjct: 140 PEPKPEPKPEPKPEPKPEPKPKPEPKPHPEPKPDPKPEPKPHPEPEPKPEPKPEPKPHPE 199
Query: 200 GXXRXGXTXEEPREKXXXXKPKNKPXXNXRXXTXPXXXRXHPRXNPXIPXKKNQPTKTQN 379
+ E E KP+ KP P + +P P P K +P K +
Sbjct: 200 PEPKPEPKPEPKPEPKPEPKPEPKPKPKPEPKPKP-EPKPYPEPKPK-PEPKPEP-KPEP 256
Query: 380 EXRTRRXXXKXXXNXKKPXEGPXXPXXXTXPK-XPKTXXKP-PQXXPRPXP-XXGKNSPP 550
+ + KP P P PK PK KP P+ P+P P K P
Sbjct: 257 KPEPKPEPKPEPKPEPKPEPKP-KPEPKPHPKPEPKPEPKPEPKPEPKPEPKPEPKPEPE 315
Query: 551 XKXXHQDGXQXXPHP 595
K + + P P
Sbjct: 316 PKPEPKPEPKPEPKP 330
Score = 33.5 bits (73), Expect = 0.40
Identities = 36/153 (23%), Positives = 50/153 (32%), Gaps = 4/153 (2%)
Frame = +2
Query: 152 PXPTXXHNPRPXQQXXGXXRXGXTXEEPREKXXXXKPKNKPXXNXRXXTXP-XXXRXHPR 328
P PT P+P + E E KP+ KP + P P+
Sbjct: 66 PKPTPKPEPKPEPEPKPVPEPEPKPEPKPEPKPEPKPEPKPYPEPKPEPKPEPKPEPEPK 125
Query: 329 XNPXIPXKKNQPTKTQNEXRTRRXXXKXXXNXKKPXEGPXXPXXXTXPK-XPKTXXKP-P 502
P P K +P K E + +P P P PK PK KP P
Sbjct: 126 PEPK-PEPKPEP-KPYPEPKPEPKPEPKPEPKPEPKPKP-EPKPHPEPKPDPKPEPKPHP 182
Query: 503 QXXPRPXP-XXGKNSPPXKXXHQDGXQXXPHPQ 598
+ P+P P K P + + + P P+
Sbjct: 183 EPEPKPEPKPEPKPHPEPEPKPEPKPEPKPEPK 215
>07_03_0091 + 13312904-13313647
Length = 247
Score = 35.5 bits (78), Expect = 0.099
Identities = 39/170 (22%), Positives = 56/170 (32%), Gaps = 6/170 (3%)
Frame = +2
Query: 107 KXXPXXKAQNXXXTXPXPTXXHNPRPXQQXXGXXRXGXTXE-EPR---EKXXXXKPKNKP 274
K P K Q P P NP+P + T + EP+ + PK P
Sbjct: 45 KPDPTPKPQPETKPSPQPNPQPNPQPDPKPSPQPDPKPTPQPEPKQDPQPNPQPDPKQSP 104
Query: 275 XXNXRXXTXPXXXRXHPRXNPXIPXKKN-QPTKTQNEXRTRRXXXKXXXNXKKPXEGPXX 451
+ + P + P+ NP K QP Q+ + K P + P
Sbjct: 105 QPDPKPTPQP-NPKQDPQPNPQPDPKPTLQPNPKQDPQPNPQPNPKPTPQL-DPKQDPQP 162
Query: 452 PXXXTXPKXPKTXXKP-PQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHPQ 598
+ PK KP PQ P P P + P K + P+P+
Sbjct: 163 NPQPSPKADPKPNPKPKPQPEPSPNPKP-EPKPEPKPEPSPNPKPNPNPK 211
>05_03_0039 - 7621613-7622695
Length = 360
Score = 35.1 bits (77), Expect = 0.13
Identities = 38/166 (22%), Positives = 50/166 (30%), Gaps = 3/166 (1%)
Frame = +2
Query: 107 KXXPXXKAQNXXXTXPXPTXXHNPRPXQQXXGXXRXGXTXEEPREKXXXXKPKNKPXXNX 286
K P K + P P P+P + + G E E +PK +P
Sbjct: 129 KPKPEPKPEPKPEHKPEPKPEPEPKPYPKPKPEPKPGPKPEPKPEPKPHPEPKPEPKPKP 188
Query: 287 RXXTXPXXXRXHPRXNP-XIPXKKNQPTKTQNEXRTRRXXXKXXXNXKKPXEGPXXPXXX 463
P + P+ P P K +P K E P
Sbjct: 189 VPHPEP---KPEPKPEPKPHPEPKPEPKPEPKLHPKPEPKPHPEPEPKLKPEPKPEPKPE 245
Query: 464 TXPK-XPKTXXKP-PQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHP 595
PK PK KP P+ P+P P K P K G + P P
Sbjct: 246 PEPKPEPKPEPKPEPKPYPKPKPEP-KPVPKPKPIPHPGPKPKPKP 290
Score = 33.9 bits (74), Expect = 0.30
Identities = 38/164 (23%), Positives = 54/164 (32%), Gaps = 3/164 (1%)
Frame = +2
Query: 116 PXXKAQNXXXTXPXPTXXHNPRPXQQXXGXXRXGXTXEEPREKXXXXKPKNKPXXNXRXX 295
P K + P P P+P + + E E KP+ KP +
Sbjct: 96 PELKPEPKPNPEPKPEPKPEPKPEPKPYPEPKPKPKPEPKPEPKPEHKPEPKPEPEPKPY 155
Query: 296 TXP-XXXRXHPRXNPXIPXKKNQPTKTQNEXRTRRXXXKXXXNXKKPXEGPXXPXXXTXP 472
P + P+ P P K P + + E + + KP P P P
Sbjct: 156 PKPKPEPKPGPKPEPK-PEPKPHP-EPKPEPKPKPVPHPEPKPEPKPEPKP-HPEPKPEP 212
Query: 473 K-XPKTXXKP-PQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHPQ 598
K PK KP P+ P P P K P K + + P P+
Sbjct: 213 KPEPKLHPKPEPKPHPEPEP---KLKPEPKPEPKPEPEPKPEPK 253
>07_03_0089 - 13300902-13301645
Length = 247
Score = 34.7 bits (76), Expect = 0.17
Identities = 39/170 (22%), Positives = 56/170 (32%), Gaps = 6/170 (3%)
Frame = +2
Query: 107 KXXPXXKAQNXXXTXPXPTXXHNPRPXQQXXGXXRXGXTXE-EPRE---KXXXXKPKNKP 274
K P K Q P P NP+P + T + EP++ PK P
Sbjct: 45 KPDPTPKPQPETKPSPQPNPQPNPQPDPKPSPQPDPKPTPQPEPKQDPKPNPQPDPKPSP 104
Query: 275 XXNXRXXTXPXXXRXHPRXNP-XIPXKKNQPTKTQNEXRTRRXXXKXXXNXKKPXEGPXX 451
+ + P + P+ NP P QP Q+ + K P + P
Sbjct: 105 QPDPKPTPQP-DPKQDPQPNPQPDPKPTPQPNPKQDPQPNPQPDPKPTPQ-PDPKQDPQP 162
Query: 452 PXXXTXPKXPKTXXKP-PQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHPQ 598
+ PK KP PQ P P P + P K + P+P+
Sbjct: 163 NPQPSPKADPKPNPKPKPQPEPSPNPKP-EPKPEPKPEPSPNPKPNPNPK 211
>04_03_0904 + 20717005-20718087
Length = 360
Score = 34.7 bits (76), Expect = 0.17
Identities = 41/200 (20%), Positives = 52/200 (26%), Gaps = 2/200 (1%)
Frame = +2
Query: 11 PXTPPPQXEXXXXXXXXXPQTXKQ-RXXXXTXKKXXPXXKAQNXXXTXPXPTXXHNPRPX 187
P PP + + + K+ + T K P P P P
Sbjct: 44 PEKPPKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPTPPPYTPKPTPP 103
Query: 188 QQXXGXXRXGXTXEEPREKXXXXKPKNKPXXNXRXXTX-PXXXRXHPRXNPXIPXKKNQP 364
T P+ KP+ KP T P + P+ P P K QP
Sbjct: 104 AHTPTPPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTPP-PTYKPQP 162
Query: 365 TKTQNEXRTRRXXXKXXXNXKKPXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNS 544
T T KP P P P+ P P P P K
Sbjct: 163 KPTPTPY-TPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQ 221
Query: 545 PPXKXXHQDGXQXXPHPQKT 604
P Q P+P T
Sbjct: 222 PKPNPPPTYKPQPKPNPPPT 241
Score = 31.9 bits (69), Expect = 1.2
Identities = 35/133 (26%), Positives = 41/133 (30%), Gaps = 6/133 (4%)
Frame = +2
Query: 221 TXEEPREKXXXXKPKNKPXXNXRXXTX-PXXXRXHPRXNPXIPXKKNQPTKTQNEXRTRR 397
T P KP+ KP T P + P+ NP P K QP N T +
Sbjct: 187 TPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPNPP-PTYKPQPKP--NPPPTYK 243
Query: 398 XXXKXXXNXKKPXEGPXX---PXXXTXPKXPKTXXKPPQXXPRPXP--XXGKNSPPXKXX 562
KP P P P P T P+ P P P K +PP
Sbjct: 244 PAPPTYKPQPKPNPPPTYKPQPKPTPTPYTPPTYKPQPKPTPTPTPYTPTPKPNPPPTYK 303
Query: 563 HQDGXQXXPHPQK 601
Q P P K
Sbjct: 304 PQPKPTPTPTPYK 316
Score = 29.9 bits (64), Expect = 4.9
Identities = 24/83 (28%), Positives = 25/83 (30%), Gaps = 1/83 (1%)
Frame = +1
Query: 367 KNPKRXANPKXXXXKXXKPXKTXRGPXXPXAXHXXKXTQNXGXAXPKXPPAXPTXRQK-L 543
K PK P K KP K + P A K T P P P K
Sbjct: 46 KPPKEHKPPHHHEPKPEKPPKEHK----PPAYTPPKPTPTPPTYTPTPKPTPPPYTPKPT 101
Query: 544 PPXKXXXPGRXPXXPXPPKNKXP 612
PP P P PPK P
Sbjct: 102 PPAHTPTPPTYTPTPTPPKPTPP 124
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 34.7 bits (76), Expect = 0.17
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +2
Query: 428 KPXEGPXXPXXXTXPKXPKTXXKP--PQXXPRPXPXXGKNSP-PXKXXHQDGXQXXPHP 595
KP P P PK PK KP P+ P+P P K P P + G + P P
Sbjct: 164 KPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKPKPGP 222
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Frame = +2
Query: 428 KPXEGPXXPXXXTXPKXPKTXXKP----PQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHP 595
KP P P PK PK KP P+ P+P P K P K P P
Sbjct: 173 KPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKPKPGPPQPWWPIPFP 232
Query: 596 Q 598
+
Sbjct: 233 K 233
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/78 (23%), Positives = 25/78 (32%)
Frame = +2
Query: 269 KPXXNXRXXTXPXXXRXHPRXNPXIPXKKNQPTKTQNEXRTRRXXXKXXXNXKKPXEGPX 448
KP + P + P+ P P K +P K + + + K P GP
Sbjct: 158 KPGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPK 217
Query: 449 XPXXXTXPKXPKTXXKPP 502
P P KPP
Sbjct: 218 PKPGPPQPWWPIPFPKPP 235
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/57 (28%), Positives = 20/57 (35%)
Frame = +2
Query: 431 PXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHPQK 601
P P P P P+ PP+ P P P SPP + + P P K
Sbjct: 561 PEVTPSPPEITPYPSPPEVTPGPPEITPYPSPPEITPSPPEITPYPSPPEVVPSPPK 617
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = +2
Query: 431 PXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHP 595
P P P P P+ PP+ P P P SPP + + P P
Sbjct: 577 PEVTPGPPEITPYPSPPEITPSPPEITPYPSPPEVVPSPPKITPYPSPPEVTPSP 631
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = +2
Query: 431 PXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHP 595
P P P P P+ PP+ P P P SPP + + P P
Sbjct: 437 PEVTPSPPEIAPYPSPPEIVPSPPEITPYPSPPEIVPSPPEITPYPSPPEVVPGP 491
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = +2
Query: 431 PXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHP 595
P P P P P+ PP+ P P P SPP + + P P
Sbjct: 485 PEVVPGPPEINPYPSPPEIVPSPPEITPYPSPPEIVPSPPEITPYPSPPEIVPSP 539
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/55 (27%), Positives = 18/55 (32%)
Frame = +2
Query: 431 PXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHP 595
P P P P P+ PP+ P P P SPP + P P
Sbjct: 593 PEITPSPPEITPYPSPPEVVPSPPKITPYPSPPEVTPSPPEITPYPSPPDIVPSP 647
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/51 (27%), Positives = 18/51 (35%)
Frame = +2
Query: 443 PXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHP 595
P P P P+ PP+ P P P SPP + + P P
Sbjct: 473 PSPPEITPYPSPPEVVPGPPEINPYPSPPEIVPSPPEITPYPSPPEIVPSP 523
>04_04_1104 -
30928475-30928501,30929008-30929110,30929287-30929340,
30929803-30929895,30930063-30930140,30930416-30930527,
30930618-30930756,30930823-30930910,30930984-30931079,
30931675-30931781,30931874-30932009,30932089-30932186,
30932954-30933047,30933132-30933301,30933749-30933819,
30936066-30936194,30936552-30936654,30936764-30936907,
30937123-30937245,30937482-30937563,30939044-30939120,
30939261-30939315,30939365-30939443,30939544-30939620,
30939739-30939869,30939947-30940120,30940245-30940310,
30940937-30941572
Length = 1113
Score = 31.1 bits (67), Expect = 2.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 3 AXGPXPPPPXXRGGGXGXAXPPKQ 74
A PPP RGGG G A PP Q
Sbjct: 69 APAAPPPPTSRRGGGGGAALPPPQ 92
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +1
Query: 436 RGPXXPXAXHXXKXTQNXGXAXPKXPPAXPTXRQKLPPXKXXXPGRXPXXPXPPKNKXPX 615
R P P T N A P PP P PP PG P P P P
Sbjct: 592 RAPRVPRPPPAPSATANTASALPPPPPRPPGAPP--PPPPPGKPG-GPPPPPPRPGSLPR 648
Query: 616 KSXXGD 633
GD
Sbjct: 649 NLAGGD 654
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +1
Query: 436 RGPXXPXAXHXXKXTQNXGXAXPKXPPAXPTXRQKLPPXKXXXPGRXPXXPXPPKNKXPX 615
R P P T N A PP P PP PG P P PP P
Sbjct: 897 RAPRVPRPPPAPSATANTASALSPPPPRPPGAPP--PPPPPGKPGGPPP-PPPPPGSLPR 953
Query: 616 KSXXGD 633
GD
Sbjct: 954 NLAGGD 959
>01_07_0248 + 42261373-42261609,42261733-42261905,42261986-42262058,
42262148-42262282,42262352-42262562,42262886-42263034,
42263169-42263267,42263821-42263989,42264176-42264308,
42264600-42264694,42264774-42264882,42265136-42265295,
42265433-42265594,42265814-42265985,42266254-42266402,
42266914-42266951,42267779-42267839,42267913-42268155,
42268233-42268315,42269521-42269609,42270449-42270495,
42270576-42270656,42270737-42270899,42271077-42271267,
42271691-42271762
Length = 1097
Score = 29.5 bits (63), Expect = 6.5
Identities = 23/103 (22%), Positives = 32/103 (31%)
Frame = +2
Query: 176 PRPXQQXXGXXRXGXTXEEPREKXXXXKPKNKPXXNXRXXTXPXXXRXHPRXNPXIPXKK 355
P P + + + E+ ++ P+ KP R T P PR P P +
Sbjct: 985 PPPKRDVPHNEKGAPSAEKDVQQRREPSPRRKPASPPRKRTPPNRRIESPRRQPD-PSPR 1043
Query: 356 NQPTKTQNEXRTRRXXXKXXXNXKKPXEGPXXPXXXTXPKXPK 484
+P R R P P P T PK K
Sbjct: 1044 RRPDSP--PIRRRADASPVRRGDTPPRRRPGSPVTTTTPKAAK 1084
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 8.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 9 GPXPPPPXXRGGGXGXAXPP 68
GP PPPP GG G PP
Sbjct: 361 GPSPPPPPPPGGKKGGPPPP 380
Score = 26.2 bits (55), Expect(2) = 7.1
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 511 PPAXPTXRQKLPPXKXXXPGRXPXXPXPPKNKXPXKSXXG 630
PP P PP K P P P PP P G
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Score = 21.4 bits (43), Expect(2) = 7.1
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 736 PGAKEXXPXXPPP 774
PG K+ P PPP
Sbjct: 370 PGGKKGGPPPPPP 382
>01_02_0007 + 10132380-10133201
Length = 273
Score = 29.1 bits (62), Expect = 8.6
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +2
Query: 443 PXXPXXXTXPKXPKTXXKP-PQXXPRPXPXXGKNSPPXKXXHQD 571
P P P P+ +P P P+P P NSPP D
Sbjct: 184 PPQPLPQPDPNNPQPLPQPDPNAPPQPLPQPDPNSPPQPLPQPD 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,021,915
Number of Sequences: 37544
Number of extensions: 321625
Number of successful extensions: 1638
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4353229848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -