Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_K18
(1377 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 39 0.007
Z92826-7|CAD90171.2| 99|Caenorhabditis elegans Hypothetical pr... 34 0.27
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 32 1.1
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 4.4
AF003136-6|AAK21375.2| 384|Caenorhabditis elegans Hypothetical ... 30 4.4
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 7.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 7.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 7.7
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 39.1 bits (87), Expect = 0.007
Identities = 34/151 (22%), Positives = 47/151 (31%), Gaps = 3/151 (1%)
Frame = +2
Query: 107 KXXPXXKAQNXXXTXPXPTXXHNPRPXQQXXGXXRXGXTXEEPREKXXXXKPKNKPXXNX 286
K P K + P P P+P + E + KPK KP
Sbjct: 170 KPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKP 229
Query: 287 RXXTXPXXXRXHPRXNPXIPXKKNQP---TKTQNEXRTRRXXXKXXXNXKKPXEGPXXPX 457
+ P + P+ P P K +P TK ++E + + KP P P
Sbjct: 230 KPKPNP-NPKPEPKPKPK-PKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNP-MPE 286
Query: 458 XXTXPKXPKTXXKPPQXXPRPXPXXGKNSPP 550
PK P P+P P N P
Sbjct: 287 LKPKPKHKPNSRPKPNPRPKPKPRSKPNPKP 317
Score = 36.3 bits (80), Expect = 0.051
Identities = 38/171 (22%), Positives = 56/171 (32%), Gaps = 7/171 (4%)
Frame = +2
Query: 116 PXXKAQNXXXTXPXPTXXHNPRPXQQXXGXXRXGXTXEEPREKXXXXKPKNKPXXNXRXX 295
P K + P P P+P + + E + KPK KP +
Sbjct: 165 PEPKPKPKPEPKPKPKPDPKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPK 224
Query: 296 TXP-XXXRXHPRXNPXIPXKKNQPTKTQNEXRTR-RXXXKXXXNXK-KPXEGPXXPXXXT 466
P + +P P K K + + +T+ + K K KP P
Sbjct: 225 PKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKPKPKLKPKPKPNPKPEPNPM 284
Query: 467 XPKXPKTXXKP---PQXXPRPXPXXGKNSPPXKXXHQDGXQXXP-HPQKTK 607
PK KP P+ PRP P ++ P K + + P H K K
Sbjct: 285 PELKPKPKHKPNSRPKPNPRPKPKP-RSKPNPKPKPRPKPELKPNHKLKLK 334
>Z92826-7|CAD90171.2| 99|Caenorhabditis elegans Hypothetical
protein C18D11.6 protein.
Length = 99
Score = 33.9 bits (74), Expect = 0.27
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 597 WGXGXXWXPSWXXXFXGGEFLPXXGXGRGXFWG 499
WG W W F GG +P G G FWG
Sbjct: 67 WGFHRPWGLGWHRPFFGGYGMPFGGFGGYPFWG 99
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +2
Query: 350 KKNQPTKTQNEXRTRRXXXKXXXNXKKPXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPX 529
+K + +Q R+++ + KKP E P T P+ PK + P P P P
Sbjct: 116 EKKKKEGSQRSARSKKASSEKPEVEKKPEEPPVEDEAKTPPEKPKV--EEPAPAPAPAPA 173
Query: 530 XGKNSPP 550
+PP
Sbjct: 174 AVAPAPP 180
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/57 (24%), Positives = 19/57 (33%)
Frame = +1
Query: 442 PXXPXAXHXXKXTQNXGXAXPKXPPAXPTXRQKLPPXKXXXPGRXPXXPXPPKNKXP 612
P P + + + P PP P + PP P R P P P + P
Sbjct: 223 PSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRP 279
>AF003136-6|AAK21375.2| 384|Caenorhabditis elegans Hypothetical
protein F28B3.3 protein.
Length = 384
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/63 (25%), Positives = 22/63 (34%)
Frame = +2
Query: 419 NXKKPXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSPPXKXXHQDGXQXXPHPQ 598
N K P +GP P + PK P Q P + PP Q P P+
Sbjct: 10 NAKVPPDGPTSPPIPSSPKFDANVGFPAQRSPSTPSVHRRIFPPSGVARTPSSQLPPSPK 69
Query: 599 KTK 607
++
Sbjct: 70 LSR 72
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/78 (21%), Positives = 23/78 (29%)
Frame = +2
Query: 368 KTQNEXRTRRXXXKXXXNXKKPXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSP 547
K ++ ++ K KP + P P P P KPP P P
Sbjct: 102 KPKDPKLAKKAPAKKPTETLKPKDAPKEPPKPADPPKPAALKKPPWEDDPDEPEADFTMP 161
Query: 548 PXKXXHQDGXQXXPHPQK 601
K + P P K
Sbjct: 162 APKKPDTEDLADPPEPPK 179
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 431 PXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSPP 550
P P P P P+ PP PR P G PP
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 431 PXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSPP 550
P P P P P+ PP PR P G PP
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +2
Query: 431 PXEGPXXPXXXTXPKXPKTXXKPPQXXPRPXPXXGKNSPP 550
P P P P P+ PP PR P G PP
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,489,650
Number of Sequences: 27780
Number of extensions: 207603
Number of successful extensions: 893
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3892097572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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