Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_K17
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067936-7|AAC19215.1|  316|Caenorhabditis elegans Hypothetical ...    87   2e-17
AC024876-7|AAF60890.4|  211|Caenorhabditis elegans Hypothetical ...    38   0.013
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ...    32   0.48 

>AF067936-7|AAC19215.1|  316|Caenorhabditis elegans Hypothetical
           protein C24G6.8 protein.
          Length = 316

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
 Frame = +3

Query: 342 VSNEEYKLVLVVRTDLSMGKGKIAAQCCHAAVGAFEKALKKD--PEGLKAWQMTGQAKVA 515
           V+   +K+VLV    L MG GKIAAQ  HA +G + +A+  +     + AW   GQ K+ 
Sbjct: 196 VAGRTHKMVLVANMSLKMGTGKIAAQVGHATLGVYRQAMNSENGQNAIAAWTRHGQVKIV 255

Query: 516 LKIDSLEEIKKIADNAKKMGLITSLIRDAGRTQIAPNSITVLGVGPAPKDIIDKVTGHLK 695
           +K  S E++  +   AK  G    L++DAG TQI   S TVLG+    +  +D VTG LK
Sbjct: 256 VKGQSTEQLMDLCKVAKDAGCYYYLVQDAGYTQIPAGSRTVLGIFGTVEQ-VDSVTGGLK 314

Query: 696 LL 701
           LL
Sbjct: 315 LL 316


>AC024876-7|AAF60890.4|  211|Caenorhabditis elegans Hypothetical
           protein Y94H6A.7 protein.
          Length = 211

 Score = 37.5 bits (83), Expect = 0.013
 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
 Frame = +3

Query: 303 KMFSNASETVKKFVSNEEYKLVLVVRTDLS--MG--KGKIAAQCCHAAVGAFEKALKKDP 470
           K F    + +   V+   Y + +++R DL   +G   G +  Q  HAA  A     + DP
Sbjct: 82  KQFDEVLQHIMATVAATSYVMYVILRRDLQTKLGWPLGAVCTQAAHAA-SASMWIFRNDP 140

Query: 471 EGLKAW--QMTGQAKVALKIDSLEEIKKIAD 557
              +A+   +    KV L +DS EEIKK+AD
Sbjct: 141 N-TEAYTSNLDSMHKVTLGVDSEEEIKKVAD 170


>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
           protein R155.3 protein.
          Length = 1165

 Score = 32.3 bits (70), Expect = 0.48
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 489 QMTGQAKVALKIDSLEEIKKIADNAKKMGLITSLIRDAGRTQI 617
           Q+  Q K   K+ +  E  K+ +NAKK+G I  ++   G+ Q+
Sbjct: 279 QLPAQLKALEKLMNFSEQLKLPENAKKLGNIIEIVNQDGKNQL 321


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,423,854
Number of Sequences: 27780
Number of extensions: 359453
Number of successful extensions: 881
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)