Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_K16
         (922 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.97 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    24   1.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.9  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 25.0 bits (52), Expect = 0.97
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = -3

Query: 332 VCAASVM*ILMHSPVGRNQSTPIMHEHIGLNKIIATVSTTNDDTFKIK 189
           VC  SVM + +H    R++   ++H    L +  +++   N +  +I+
Sbjct: 44  VCLGSVMQLPIHGTEPRSKEEILLHAKDFLEQYFSSIRRLNSEAHRIR 91


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 669 RGGYRAIRFATTAVGA 622
           R GY   RFA TA+GA
Sbjct: 401 RSGYSVARFAETALGA 416


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 571  RDPSRSTITIKQYTLHTKTHPIDALLSSTRTIHTLTTAAS 452
            R PS+    I QYT++TK    +   S     + LT  AS
Sbjct: 1201 RPPSQPNGVITQYTVYTKADNAEEPTSQKVPPNQLTHEAS 1240


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +3

Query: 120 QTNPVLLVKILFTMSILIKQCWIFYFKSIVISR*NRGNNL 239
           Q NP  L  I  T S++  Q ++F+      S     N L
Sbjct: 278 QKNPQKLENIKLTDSLIAAQAFVFFLAGFETSSTTMSNAL 317


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 469 LTTAASRSSRLVVCDHQLAKLSLHNN 392
           L TAA+ S   ++ + Q+ K S+HNN
Sbjct: 564 LNTAATLSFCEMIHNAQVNKRSIHNN 589


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,296
Number of Sequences: 438
Number of extensions: 3217
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)