Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_K14
         (910 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    25   0.95 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.9  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   2.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.7  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   6.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   8.9  

>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = -1

Query: 73  LGTFQTTSQNLKE 35
           LG FQTTSQNL++
Sbjct: 184 LGRFQTTSQNLED 196


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 432 LIVREGIFGFCICAVVDENGTKATSL 355
           ++   G  G C  +V+DENG +  +L
Sbjct: 307 ILPERGELGHCTASVMDENGLQFFNL 332


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 222 IAECPKTENYHQTKVLV 272
           IAECP++EN  Q   LV
Sbjct: 75  IAECPESENTVQKAALV 91


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 692 VVMKSNDCLYIVXFMEHSS 748
           VV KSN  + I  FME+ S
Sbjct: 702 VVTKSNPVMIITEFMENGS 720


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 378 NGTKATSLDGPLNGRSKILRFSVPNK 301
           + TK+  L+GP NG+ K    ++ N+
Sbjct: 201 SSTKSYVLEGPRNGKRKRKSSTIENE 226


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 209 CRNNYCRMSKNGELSSN 259
           C + YC + K  ELS N
Sbjct: 82  CASKYCGIGKECELSPN 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,928
Number of Sequences: 438
Number of extensions: 5443
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)