Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_K13
         (973 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938     31   1.0  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    30   2.4  

>05_05_0233 + 23496405-23496932,23497346-23497621,23497747-23497938
          Length = 331

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -2

Query: 225 FXXFFXXLFFXFFFXXFFFXSIFF 154
           F  FF   FF FFF  FFF   FF
Sbjct: 62  FFFFFFFFFFFFFFFFFFFFFFFF 85



 Score = 31.5 bits (68), Expect = 1.0
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = -2

Query: 225 FXXFFXXLFFXFFFXXFFFXSIFF 154
           F  FF   FF FFF  FFF   FF
Sbjct: 63  FFFFFFFFFFFFFFFFFFFFFFFF 86



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 234 FXSFXXFFXXLFFXFFFXXFFF 169
           F  F  FF   FF FFF  FFF
Sbjct: 62  FFFFFFFFFFFFFFFFFFFFFF 83



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 234 FXSFXXFFXXLFFXFFFXXFFF 169
           F  F  FF   FF FFF  FFF
Sbjct: 63  FFFFFFFFFFFFFFFFFFFFFF 84



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 234 FXSFXXFFXXLFFXFFFXXFFF 169
           F  F  FF   FF FFF  FFF
Sbjct: 64  FFFFFFFFFFFFFFFFFFFFFF 85



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 234 FXSFXXFFXXLFFXFFFXXFFF 169
           F  F  FF   FF FFF  FFF
Sbjct: 65  FFFFFFFFFFFFFFFFFFFFFF 86


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 225 FXXFFXXLFFXFFFXXFFFXSIFF 154
           +  FF   FF FFF  FFF   FF
Sbjct: 85  YAFFFFFFFFFFFFFFFFFFFFFF 108



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -2

Query: 234 FXSFXXFFXXLFFXFFFXXFFF 169
           F  F  FF   FF FFF  FFF
Sbjct: 87  FFFFFFFFFFFFFFFFFFFFFF 108



 Score = 29.1 bits (62), Expect = 5.6
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -2

Query: 225 FXXFFXXLFFXFFFXXFFFXS 163
           F  FF   FF FFF  FFF S
Sbjct: 89  FFFFFFFFFFFFFFFFFFFFS 109



 Score = 28.3 bits (60), Expect = 9.8
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 228 SFXXFFXXLFFXFFFXXFFF 169
           +F  FF   FF FFF  FFF
Sbjct: 86  AFFFFFFFFFFFFFFFFFFF 105


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,326,744
Number of Sequences: 37544
Number of extensions: 26906
Number of successful extensions: 205
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2823252340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)