Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_K12
         (829 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052056-1|AAK93480.1| 1218|Drosophila melanogaster LP08452p pro...    30   4.4  
AE014296-1730|AAN11956.2| 1218|Drosophila melanogaster CG32046-P...    30   4.4  
AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-P...    30   4.4  

>AY052056-1|AAK93480.1| 1218|Drosophila melanogaster LP08452p protein.
          Length = 1218

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = -1

Query: 301  QALLKSCASFDLVSELNCCSKVLWNFLGVVFDVLEEVGSVASHHRSLGQSDAGEENYELG 122
            +A++    S D +S    C  +  + L + FD+   V S+     S G+S +G + +++G
Sbjct: 848  KAVMDRAESLDTLSP---CESICSDDLMMDFDMNSSVDSIDHMASSTGRSRSGSDLHKIG 904

Query: 121  GHDV 110
            G D+
Sbjct: 905  GQDI 908


>AE014296-1730|AAN11956.2| 1218|Drosophila melanogaster CG32046-PB,
            isoform B protein.
          Length = 1218

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = -1

Query: 301  QALLKSCASFDLVSELNCCSKVLWNFLGVVFDVLEEVGSVASHHRSLGQSDAGEENYELG 122
            +A++    S D +S    C  +  + L + FD+   V S+     S G+S +G + +++G
Sbjct: 848  KAVMDRAESLDTLSP---CESICSDDLMMDFDMNSSVDSIDHMASSTGRSRSGSDLHKIG 904

Query: 121  GHDV 110
            G D+
Sbjct: 905  GQDI 908


>AE014296-1729|AAF50210.2| 1392|Drosophila melanogaster CG32046-PA,
            isoform A protein.
          Length = 1392

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 17/64 (26%), Positives = 33/64 (51%)
 Frame = -1

Query: 301  QALLKSCASFDLVSELNCCSKVLWNFLGVVFDVLEEVGSVASHHRSLGQSDAGEENYELG 122
            +A++    S D +S    C  +  + L + FD+   V S+     S G+S +G + +++G
Sbjct: 848  KAVMDRAESLDTLSP---CESICSDDLMMDFDMNSSVDSIDHMASSTGRSRSGSDLHKIG 904

Query: 121  GHDV 110
            G D+
Sbjct: 905  GQDI 908


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,947,606
Number of Sequences: 53049
Number of extensions: 430859
Number of successful extensions: 1404
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)