Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_K12
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 31 0.76
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 31 0.76
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 31 0.76
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 31 0.76
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 28 7.1
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 31.5 bits (68), Expect = 0.76
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 40 KIXTHSSVFAVRVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRT 213
+I +S A S A S S+ HH S SL + G + A+ S L+QGHR
Sbjct: 59 QIPQSASFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRN 117
Query: 214 PHQGSSIRL*NNSLTRSPSQRTHRTSA 294
P GS N+LTRS Q + S+
Sbjct: 118 PALGS-----GNTLTRSYHQPSSTNSS 139
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 31.5 bits (68), Expect = 0.76
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 40 KIXTHSSVFAVRVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRT 213
+I +S A S A S S+ HH S SL + G + A+ S L+QGHR
Sbjct: 59 QIPQSASFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRN 117
Query: 214 PHQGSSIRL*NNSLTRSPSQRTHRTSA 294
P GS N+LTRS Q + S+
Sbjct: 118 PALGS-----GNTLTRSYHQPSSTNSS 139
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 31.5 bits (68), Expect = 0.76
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 40 KIXTHSSVFAVRVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRT 213
+I +S A S A S S+ HH S SL + G + A+ S L+QGHR
Sbjct: 59 QIPQSASFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRN 117
Query: 214 PHQGSSIRL*NNSLTRSPSQRTHRTSA 294
P GS N+LTRS Q + S+
Sbjct: 118 PALGS-----GNTLTRSYHQPSSTNSS 139
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 31.5 bits (68), Expect = 0.76
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 40 KIXTHSSVFAVRVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRT 213
+I +S A S A S S+ HH S SL + G + A+ S L+QGHR
Sbjct: 59 QIPQSASFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRN 117
Query: 214 PHQGSSIRL*NNSLTRSPSQRTHRTSA 294
P GS N+LTRS Q + S+
Sbjct: 118 PALGS-----GNTLTRSYHQPSSTNSS 139
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 31.5 bits (68), Expect = 0.76
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 40 KIXTHSSVFAVRVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRT 213
+I +S A S A S S+ HH S SL + G + A+ S L+QGHR
Sbjct: 59 QIPQSASFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRN 117
Query: 214 PHQGSSIRL*NNSLTRSPSQRTHRTSA 294
P GS N+LTRS Q + S+
Sbjct: 118 PALGS-----GNTLTRSYHQPSSTNSS 139
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 31.5 bits (68), Expect = 0.76
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 40 KIXTHSSVFAVRVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRT 213
+I +S A S A S S+ HH S SL + G + A+ S L+QGHR
Sbjct: 59 QIPQSASFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRN 117
Query: 214 PHQGSSIRL*NNSLTRSPSQRTHRTSA 294
P GS N+LTRS Q + S+
Sbjct: 118 PALGS-----GNTLTRSYHQPSSTNSS 139
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 31.5 bits (68), Expect = 0.76
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 40 KIXTHSSVFAVRVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRT 213
+I +S A S A S S+ HH S SL + G + A+ S L+QGHR
Sbjct: 59 QIPQSASFAAAPTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRN 117
Query: 214 PHQGSSIRL*NNSLTRSPSQRTHRTSA 294
P GS N+LTRS Q + S+
Sbjct: 118 PALGS-----GNTLTRSYHQPSSTNSS 139
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 148 HRSGPRSDGATRRSRLLQGHRTPHQGSSIRL 240
HR GP GAT R+L+ R P++ I L
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNRTCHIAL 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,279,103
Number of Sequences: 27780
Number of extensions: 200428
Number of successful extensions: 575
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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