Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_J22
         (952 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.     26   3.3  
BC117407-1|AAI17408.1| 1081|Homo sapiens LOC152485 protein protein.    25   5.7  
AK091130-1|BAC03591.1| 1077|Homo sapiens protein ( Homo sapiens ...    25   5.7  

>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
          Length = 1709

 Score = 26.2 bits (55), Expect(2) = 3.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 538 PPPPPPPXXFXF 573
           PPPPPPP  + F
Sbjct: 650 PPPPPPPHIYDF 661



 Score = 24.2 bits (50), Expect(2) = 3.3
 Identities = 12/45 (26%), Positives = 12/45 (26%)
 Frame = +1

Query: 424 PPPGAPPXXXXKKXXXXXXXXXXXXXXXXXXXKKKXXXPPPPPPP 558
           PPP  PP                               PPPPPPP
Sbjct: 611 PPPPPPPPYLASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPPPPP 655


>BC117407-1|AAI17408.1| 1081|Homo sapiens LOC152485 protein protein.
          Length = 1081

 Score = 25.0 bits (52), Expect(2) = 5.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 523 KKXXXPPPPPPP 558
           +K   PPPPPPP
Sbjct: 325 EKVTPPPPPPPP 336



 Score = 24.6 bits (51), Expect(2) = 5.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 538 PPPPPPPXXFXFFXXP 585
           PPPPPPP        P
Sbjct: 337 PPPPPPPQSLELLLLP 352


>AK091130-1|BAC03591.1| 1077|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33811 fis, clone CTONG2002095. ).
          Length = 1077

 Score = 25.0 bits (52), Expect(2) = 5.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 523 KKXXXPPPPPPP 558
           +K   PPPPPPP
Sbjct: 325 EKVTPPPPPPPP 336



 Score = 24.6 bits (51), Expect(2) = 5.7
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 538 PPPPPPPXXFXFFXXP 585
           PPPPPPP        P
Sbjct: 337 PPPPPPPQSLELLLLP 352


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,660,644
Number of Sequences: 237096
Number of extensions: 1923911
Number of successful extensions: 21683
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13143
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12547615372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)