Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_J15
(910 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1032 - 33950477-33950704,33951122-33951311,33952714-33953333 33 0.31
04_04_1236 + 31990128-31990268,31990291-31990674,31991284-31991469 32 0.72
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 30 2.2
09_04_0388 + 17234485-17234583,17234710-17234893,17235252-172360... 30 2.9
07_03_0424 - 18060133-18061581 30 2.9
06_01_1020 - 7975019-7975201,7975324-7975425,7976178-7976231,797... 30 2.9
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287... 29 3.9
08_02_0829 - 21604845-21605588 29 5.1
07_03_1542 + 27577257-27577559,27577653-27577730,27577900-275779... 29 5.1
04_03_0496 + 16549333-16549465,16549620-16550020,16550412-165508... 29 5.1
03_06_0106 - 31682200-31682775 29 5.1
10_07_0130 + 13241085-13241151,13241268-13241339,13242458-132428... 29 6.7
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 29 6.7
08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947 28 8.9
07_01_0404 + 3093851-3094051,3094622-3094948,3096685-3096798,309... 28 8.9
07_01_0400 + 3048607-3048807,3049378-3049704,3051441-3051554,305... 28 8.9
07_01_0396 + 3016900-3017175,3017926-3018039,3018138-3018350,301... 28 8.9
06_01_0618 - 4492057-4492590,4492780-4493192,4493714-4494026,449... 28 8.9
03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187... 28 8.9
>01_06_1032 - 33950477-33950704,33951122-33951311,33952714-33953333
Length = 345
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +1
Query: 244 LRELYPEKGATSGGIDSWLSVWSNGILLENVDESGSRVARFFPISS 381
LR L G GG D W S WS GI E+ D S + V R P++S
Sbjct: 33 LRRLSSSPGDGQGG-DEWGSSWSTGITKEHFDGSDAAVGR--PVTS 75
>04_04_1236 + 31990128-31990268,31990291-31990674,31991284-31991469
Length = 236
Score = 31.9 bits (69), Expect = 0.72
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +2
Query: 326 WRTWMKVDRGWPGFSRFRVCIIALRCAV*LSKVGRDFYLSIRPSLRHQRRDARPYSRRFC 505
WR W VD+ P F R ++A + V RDF + P R AR ++ RF
Sbjct: 117 WR-WTHVDKQAPAFGRTEFYLVACHTMGKVLVVSRDFGRARVPDTGGGRAAARYHTSRFK 175
Query: 506 VG 511
VG
Sbjct: 176 VG 177
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 365 NLATRDPLSSTFSNKIPFDQTDSHESMPPLVAPFSGYSSRKGSWMPCRP 219
+L+ DP +T + +P S +PPL+ PF+ +R SW P P
Sbjct: 33 HLSASDPSPTTRAPLLP-----SPPRLPPLLVPFAAVPARSFSWYPRSP 76
>09_04_0388 +
17234485-17234583,17234710-17234893,17235252-17236057,
17236148-17236432
Length = 457
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 221 PSLLCCGTAEPR*STRHRHIGVDSISAPHYHTMTP 117
PS++CC + T HR G D +AP + P
Sbjct: 165 PSMICCDDTQYSDGTGHRDTGADFAAAPDIDHLNP 199
>07_03_0424 - 18060133-18061581
Length = 482
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 150 GIDADMSVPRALPRLRGAATEQGRPTGHP 236
G D D ++ A PRLR A+ G P GHP
Sbjct: 47 GDDDDDALAAASPRLRYASIPDGLPDGHP 75
>06_01_1020 -
7975019-7975201,7975324-7975425,7976178-7976231,
7978065-7978475
Length = 249
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 541 AFICRREAAANALVRCCFHAYADSSYAKRLEAERSPSQL 657
A +C A A +R CF Y + S+ R + S SQL
Sbjct: 105 ASLCNSAAGAGVQLRACFVRYGNDSFLGRQDTTGSTSQL 143
>08_01_0321 +
2872609-2873027,2873477-2873905,2874743-2874944,
2875909-2875947,2876309-2876354,2877380-2877922,
2878827-2880847,2880972-2881215,2881642-2881684,
2881923-2881962,2883580-2883675,2883712-2883759,
2883964-2884290
Length = 1498
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 462 GTS-AATPALIRGGFASDPGHQSSRVSRFYLPTRSRCKRTSP 584
GT+ AATP+L A+ PG+Q +R++R +R+R R SP
Sbjct: 375 GTNQAATPSLPSQTIATTPGYQGARLTR---DSRTRGARNSP 413
>08_02_0829 - 21604845-21605588
Length = 247
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -3
Query: 365 NLATRDPLSSTFSNKIPFDQTDSHESMPPLVAPFSG---YSSRKGSWMPCRPS 216
N +R ++T + I QT++ P + PFSG +S+ S +PC PS
Sbjct: 190 NSTSRTMKTTTSAQMISKSQTETMVKAPLALLPFSGPAYFSAPDPSMLPCPPS 242
>07_03_1542 +
27577257-27577559,27577653-27577730,27577900-27577999,
27578677-27578819,27579242-27579478
Length = 286
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 438 TSRFALRSGTSAATPALIRGGFASDPGHQSSRV 536
T+ LR G AA PAL RGG A P SR+
Sbjct: 2 TTALFLRCGCLAAAPALRRGGAALRPRRTPSRL 34
>04_03_0496 + 16549333-16549465,16549620-16550020,16550412-16550880,
16552038-16552076,16553151-16553272,16553531-16553677,
16554097-16554186,16554274-16554398,16554567-16554772,
16554951-16555075,16555528-16555722,16556295-16556337,
16556762-16557267,16558198-16558570,16559772-16560062,
16560132-16561101,16561196-16561892,16562378-16562658,
16562731-16563400,16563860-16564034,16565103-16565659
Length = 2204
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 51 VSRPPHVPVQRTVAKLIVLNVIRCHGVI 134
VS P PVQ V +L+ +++I C G++
Sbjct: 1130 VSEIPFHPVQSQVLRLVCISIINCSGIL 1157
>03_06_0106 - 31682200-31682775
Length = 191
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -1
Query: 283 HHWSHPFPDTVRAKVPGCPVGR-PCSVAAPRSRGRARGTDISASIPFRHHTITP*H 119
H P PD V GC GR A P S R R T S++ P T+T H
Sbjct: 79 HRLGKPPPDLQAGAVGGCADGRGNKGPAPPTSTSRGRATSHSSAPPRSCWTLTASH 134
>10_07_0130 +
13241085-13241151,13241268-13241339,13242458-13242862,
13243057-13243112,13244116-13244274,13244379-13244498,
13244591-13245361,13245902-13246078,13246192-13246669,
13247502-13248094
Length = 965
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 98 NSVECDSVSWCDSVVP--KWNRRRYVGAACSTSAPRCRNRA 214
N ++ DS+ W + + P KW R+ G A +AP + A
Sbjct: 757 NVLKLDSLKWTEPLSPRAKWPSRQLPGTAAPAAAPHAQRSA 797
>04_03_0582 +
17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 374 IGKNLATRDPLSSTFSNKIPFDQTDSHESMPPLVAPFSGYSSRKG 240
+ + L+ R S++ S+ + + HE PP V F G+ S++G
Sbjct: 305 VQRKLSFRGAGSASSSSAGQMQRVNIHEDTPPRVDAFDGFDSKEG 349
>08_02_1211 - 25319143-25320150,25320793-25321363,25321544-25321947
Length = 660
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 155 RRRYVGAACSTSAPRCRNRARTAYRASRNLCANCI 259
R R VGA + +A C A YR LCAN +
Sbjct: 344 RSRLVGATAAAAAAACYASASEFYRDMMLLCANAL 378
>07_01_0404 +
3093851-3094051,3094622-3094948,3096685-3096798,
3096897-3097109,3097975-3098151,3098270-3100091,
3100107-3100927,3101070-3101390
Length = 1331
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 595 HAYADSSYAKRLEAERSP-SQLPPDPE 672
H Y +SY K++ A R+P S +P DP+
Sbjct: 883 HGYQLASYLKQMNANRNPYSSMPLDPQ 909
>07_01_0400 +
3048607-3048807,3049378-3049704,3051441-3051554,
3051653-3051865,3052731-3052907,3053026-3054847,
3054863-3055683,3055826-3056146
Length = 1331
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 595 HAYADSSYAKRLEAERSP-SQLPPDPE 672
H Y +SY K++ A R+P S +P DP+
Sbjct: 883 HGYQLASYLKQMNANRNPYSSMPLDPQ 909
>07_01_0396 +
3016900-3017175,3017926-3018039,3018138-3018350,
3019216-3019392,3019511-3021332,3021348-3022168,
3022311-3022631
Length = 1247
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 595 HAYADSSYAKRLEAERSP-SQLPPDPE 672
H Y +SY K++ A R+P S +P DP+
Sbjct: 799 HGYQLASYLKQMNANRNPYSSMPLDPQ 825
>06_01_0618 -
4492057-4492590,4492780-4493192,4493714-4494026,
4495257-4495828,4498324-4498600
Length = 702
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 426 AAIFTSRFALRSGTSAATPALIRGGFASD 512
AA F S ALR+ +AA+PA +R G D
Sbjct: 13 AAAFLSLLALRNAAAAASPAPVRVGVVVD 41
>03_02_0981 +
12917195-12917572,12917661-12917818,12918732-12918765,
12918942-12919074,12919167-12919221,12919281-12920064,
12920440-12920769,12920788-12920895,12921259-12921678,
12921775-12921847,12922291-12922376,12922873-12922992,
12923086-12923156,12923350-12923449
Length = 949
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 56 AAAARTCPANRR*TNSV---ECDSVSWCDSVVPKW 151
AAAA TC RR N++ CD +C + + +W
Sbjct: 145 AAAAATCHQCRRVANTICCTSCDRRGYCTNCISRW 179
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,467,005
Number of Sequences: 37544
Number of extensions: 544980
Number of successful extensions: 1846
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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