Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_J15
         (910 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128056-1|BAC87253.1|  197|Homo sapiens protein ( Homo sapiens ...    33   1.9  
AB208784-1|BAD92021.1|  222|Homo sapiens zinc finger protein 76 ...    31   7.6  

>AK128056-1|BAC87253.1|  197|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46176 fis, clone TESTI4003733. ).
          Length = 197

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 23/69 (33%), Positives = 32/69 (46%)
 Frame = +2

Query: 155 RRRYVGAACSTSAPRCRNRARTAYRASRNLCANCIRKRVRPVVA*IRGYRSGRTVSCWRT 334
           R R  G+  +     C + AR++   SR+ C    R R RP  +  R  RS R+ SCW +
Sbjct: 36  RPRLDGSGPALPPDLCLSAARSSASPSRSTCT---RSRSRPNSSSSR--RSSRS-SCWHS 89

Query: 335 WMKVDRGWP 361
           W      WP
Sbjct: 90  WSARAGSWP 98


>AB208784-1|BAD92021.1|  222|Homo sapiens zinc finger protein 76
           (expressed in testis) variant protein.
          Length = 222

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = -1

Query: 301 IATNLCHHWSHPFPDTVRAKVPGCPVGRPCSVAAPRSRGRAR 176
           I+T  C H + P P    A+  G P   PC+ A P +  R R
Sbjct: 152 ISTTWCTHTASPTPAAPAARPTGRPPPWPCTSAVPMASWRPR 193


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,828,623
Number of Sequences: 237096
Number of extensions: 2767363
Number of successful extensions: 6949
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6946
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)