Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_J14
(1001 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.002
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 37 0.020
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.14
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 34 0.14
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.14
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.32
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.56
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.56
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.56
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 3.0
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 5.2
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 6.9
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 28 9.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 9.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 9.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 9.1
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/87 (33%), Positives = 30/87 (34%)
Frame = +3
Query: 714 PXXGSXXPXPTXPPXXPLXGXLXGGXPPXPSXGXPXXXXPXPALXVXVXPPAXXPXPRXA 893
P GS P P PL G G PP P+ G P P P PP P P A
Sbjct: 232 PPAGSPPPPPPPKGSPPLAG--SGSPPPPPAAGSP----PPPRTGSPPPPPTGSPPPPPA 285
Query: 894 XWRXXXXAPPXTXLAXXXPGXRGXPPT 974
PP P RG PPT
Sbjct: 286 ---GGSPPPPRAGSPPPPPPPRGSPPT 309
Score = 33.1 bits (72), Expect = 0.32
Identities = 32/129 (24%), Positives = 34/129 (26%)
Frame = +3
Query: 594 PNNRXPXXPXXXXXPPXHPXXRXGXPXAXNXPXRXYTXXKPXXGSXXPXPTXPPXXPLXG 773
P P P PP P A P T P + P P P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 774 XLXGGXPPXPSXGXPXXXXPXPALXVXVXPPAXXPXPRXAXWRXXXXAPPXTXLAXXXPG 953
PP P G P P PPA P R AP + P
Sbjct: 293 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP-RQKRQAPERSPPTGSPP- 350
Query: 954 XRGXPPTRR 980
G PPT R
Sbjct: 351 -TGSPPTGR 358
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/87 (33%), Positives = 30/87 (34%)
Frame = +3
Query: 714 PXXGSXXPXPTXPPXXPLXGXLXGGXPPXPSXGXPXXXXPXPALXVXVXPPAXXPXPRXA 893
P GS P P PL G G PP P+ G P P P PP P P A
Sbjct: 253 PPAGSPPPPPPPKGSPPLAG--SGSPPPPPAAGSP----PPPRTGSPPPPPTGSPPPPPA 306
Query: 894 XWRXXXXAPPXTXLAXXXPGXRGXPPT 974
PP P RG PPT
Sbjct: 307 ---GGSPPPPRAGSPPPPPPPRGSPPT 330
Score = 33.1 bits (72), Expect = 0.32
Identities = 32/129 (24%), Positives = 34/129 (26%)
Frame = +3
Query: 594 PNNRXPXXPXXXXXPPXHPXXRXGXPXAXNXPXRXYTXXKPXXGSXXPXPTXPPXXPLXG 773
P P P PP P A P T P + P P P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 774 XLXGGXPPXPSXGXPXXXXPXPALXVXVXPPAXXPXPRXAXWRXXXXAPPXTXLAXXXPG 953
PP P G P P PPA P R AP + P
Sbjct: 314 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP-RQKRQAPERSPPTGSPP- 371
Query: 954 XRGXPPTRR 980
G PPT R
Sbjct: 372 -TGSPPTGR 379
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 40.3 bits (90), Expect = 0.002
Identities = 29/87 (33%), Positives = 30/87 (34%)
Frame = +3
Query: 714 PXXGSXXPXPTXPPXXPLXGXLXGGXPPXPSXGXPXXXXPXPALXVXVXPPAXXPXPRXA 893
P GS P P PL G G PP P+ G P P P PP P P A
Sbjct: 238 PPAGSPPPPPPPKGSPPLAG--SGSPPPPPAAGSP----PPPRTGSPPPPPTGSPPPPPA 291
Query: 894 XWRXXXXAPPXTXLAXXXPGXRGXPPT 974
PP P RG PPT
Sbjct: 292 ---GGSPPPPRAGSPPPPPPPRGSPPT 315
Score = 33.1 bits (72), Expect = 0.32
Identities = 32/129 (24%), Positives = 34/129 (26%)
Frame = +3
Query: 594 PNNRXPXXPXXXXXPPXHPXXRXGXPXAXNXPXRXYTXXKPXXGSXXPXPTXPPXXPLXG 773
P P P PP P A P T P + P P P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 774 XLXGGXPPXPSXGXPXXXXPXPALXVXVXPPAXXPXPRXAXWRXXXXAPPXTXLAXXXPG 953
PP P G P P PPA P R AP + P
Sbjct: 299 RAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP-RQKRQAPERSPPTGSPP- 356
Query: 954 XRGXPPTRR 980
G PPT R
Sbjct: 357 -TGSPPTGR 364
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 37.1 bits (82), Expect = 0.020
Identities = 26/90 (28%), Positives = 26/90 (28%)
Frame = -3
Query: 867 PEEXPPXXGXGAGPXXXGAPXRXSEGGPX*XXRIKAXGAGXWGXGXXSXXGAXXRCXXGX 688
P PP G G G G GG G G G G G C G
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGG----------GGGCGGGGGGGCGGGGGGCGGGG 160
Query: 687 GXWXXXAXXXGXXGGGGXXXXXGXXXGXGC 598
G G GGGG G G GC
Sbjct: 161 GGCGGGGGGCGGGGGGGCGGGGGGGCGGGC 190
Score = 31.5 bits (68), Expect = 0.98
Identities = 27/104 (25%), Positives = 27/104 (25%)
Frame = -3
Query: 750 GXWGXGXXSXXGAXXRCXXGXGXWXXXAXXXGXXGGGGXXXXXGXXXGXGCLGXXXEKKK 571
G G G G C G G G GGGG G G GC
Sbjct: 63 GGCGGGGGGCGGGGGGCGGGGGC----GGGGGGCGGGGGGCGGGGGCGGGC-APPPPPPA 117
Query: 570 XXAGXXPGXVXVLXGAXGXXVGXXAXGXGAGXAXXXXXXAGGXG 439
G G G G G G G G GG G
Sbjct: 118 CGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGG 161
Score = 29.9 bits (64), Expect = 3.0
Identities = 34/132 (25%), Positives = 34/132 (25%), Gaps = 2/132 (1%)
Frame = -3
Query: 867 PEEXPPXXGXGAGPXXXGAPXRXSEGGPX*XXRIKAXGAGXWGXGXXSXXGAXXRCXXGX 688
P PP G G G G GG G G G G G C G
Sbjct: 54 PPPPPPACGGGCGGGGGGCGG--GGGGCGGGGGCGGGGGGCGGGGGGCGGGGG--CGGGC 109
Query: 687 GXWXXXAXXXGX--XGGGGXXXXXGXXXGXGCLGXXXEKKKXXAGXXPGXVXVLXGAXGX 514
G GGGG G G GC G G G G G
Sbjct: 110 APPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGG 169
Query: 513 XVGXXAXGXGAG 478
G G G G
Sbjct: 170 CGGGGGGGCGGG 181
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 36.3 bits (80), Expect = 0.034
Identities = 26/109 (23%), Positives = 31/109 (28%)
Frame = +2
Query: 491 PXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXXPXXXXXPPPPXXPXXXA 670
P P P AP + P+ + S P P P P P P
Sbjct: 436 PTRVAPPPPPSAPPTIKFPISTGPS---YSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEV 492
Query: 671 XXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXRXXQXGPPSXSLXGAP 817
P P L P + P P P P GPP+ L P
Sbjct: 493 SKSPPPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISGPPTVRLTAVP 541
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/120 (24%), Positives = 32/120 (26%), Gaps = 1/120 (0%)
Frame = +2
Query: 437 TPXPPAXXXXXXAXPAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXX 616
TP PP P P P P P PG P + P P
Sbjct: 271 TPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP-PGMP---GMPPPPPPSRFG 326
Query: 617 XPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXP-HXPAPXAFXRXXQXGPP 793
P PPPP P P + P P P PAP + PP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 30.3 bits (65), Expect = 2.3
Identities = 30/125 (24%), Positives = 32/125 (25%)
Frame = +2
Query: 479 PAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXXPXXXXXPPPPXXP 658
PA P A A +T P L Q P P P PP P
Sbjct: 219 PANTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMP 278
Query: 659 XXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXRXXQXGPPSXSLXGAPXXXGPAP 838
+ P P P P P P PP S G P G P
Sbjct: 279 PTPGMTPRPPPPPSSGMWPP---PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 335
Query: 839 XPXXG 853
P G
Sbjct: 336 PPPPG 340
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/77 (25%), Positives = 23/77 (29%)
Frame = +3
Query: 741 PTXPPXXPLXGXLXGGXPPXPSXGXPXXXXPXPALXVXVXPPAXXPXPRXAXWRXXXXAP 920
P PP P + PP P G P P+ + PP P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTP--GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 318
Query: 921 PXTXLAXXXPGXRGXPP 971
P PG G PP
Sbjct: 319 PPPPSRFGPPGMGGMPP 335
Score = 28.7 bits (61), Expect = 6.9
Identities = 26/107 (24%), Positives = 27/107 (25%)
Frame = +2
Query: 437 TPXPPAXXXXXXAXPAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXX 616
TP PP P P P P P P P P+ P P
Sbjct: 284 TPRPPPPPSSGMWPPPPPPP---PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Query: 617 XPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAP 757
PPPP A P P AP P P P
Sbjct: 341 MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/73 (26%), Positives = 19/73 (26%)
Frame = +3
Query: 783 GGXPPXPSXGXPXXXXPXPALXVXVXPPAXXPXPRXAXWRXXXXAPPXTXLAXXXPGXRG 962
G PP P P P P P P W PP PG G
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW--PPPPPPPPGRTPGPPGMPG 315
Query: 963 XPPTRRXXVXXPP 1001
PP PP
Sbjct: 316 MPPPPPPSRFGPP 328
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 34.3 bits (75), Expect = 0.14
Identities = 26/92 (28%), Positives = 28/92 (30%), Gaps = 1/92 (1%)
Frame = +2
Query: 479 PAPXPXAXLPTXXPX-APXSTXTXPGXXPALXFFFSXXXPKQPXPXXXPXXXXXPPPPXX 655
PAP P +P P AP P P + P P P P PPPP
Sbjct: 99 PAPYPQHAVPAPAPPPAPYPQHAVPAPAP----YQQQPPPPPPPPHYPPPPPHYPPPPPA 154
Query: 656 PXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXP 751
P P P AP P P P
Sbjct: 155 PHSAYIDHSAPRPAYIEHSAP----PPQPQYP 182
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/120 (24%), Positives = 32/120 (26%), Gaps = 1/120 (0%)
Frame = +2
Query: 437 TPXPPAXXXXXXAXPAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXX 616
TP PP P P P P P PG P + P P
Sbjct: 281 TPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP-PGMP---GMPPPPPPSRFG 336
Query: 617 XPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXP-HXPAPXAFXRXXQXGPP 793
P PPPP P P + P P P PAP + PP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 30.3 bits (65), Expect = 2.3
Identities = 30/125 (24%), Positives = 32/125 (25%)
Frame = +2
Query: 479 PAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXXPXXXXXPPPPXXP 658
PA P A A +T P L Q P P P PP P
Sbjct: 229 PANTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMP 288
Query: 659 XXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXRXXQXGPPSXSLXGAPXXXGPAP 838
+ P P P P P P PP S G P G P
Sbjct: 289 PTPGMTPRPPPPPSSGMWPP---PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 345
Query: 839 XPXXG 853
P G
Sbjct: 346 PPPPG 350
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/77 (25%), Positives = 23/77 (29%)
Frame = +3
Query: 741 PTXPPXXPLXGXLXGGXPPXPSXGXPXXXXPXPALXVXVXPPAXXPXPRXAXWRXXXXAP 920
P PP P + PP P G P P+ + PP P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTP--GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 328
Query: 921 PXTXLAXXXPGXRGXPP 971
P PG G PP
Sbjct: 329 PPPPSRFGPPGMGGMPP 345
Score = 28.7 bits (61), Expect = 6.9
Identities = 26/107 (24%), Positives = 27/107 (25%)
Frame = +2
Query: 437 TPXPPAXXXXXXAXPAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXX 616
TP PP P P P P P P P P+ P P
Sbjct: 294 TPRPPPPPSSGMWPPPPPPP---PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Query: 617 XPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAP 757
PPPP A P P AP P P P
Sbjct: 351 MRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 28.3 bits (60), Expect = 9.1
Identities = 19/73 (26%), Positives = 19/73 (26%)
Frame = +3
Query: 783 GGXPPXPSXGXPXXXXPXPALXVXVXPPAXXPXPRXAXWRXXXXAPPXTXLAXXXPGXRG 962
G PP P P P P P P W PP PG G
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW--PPPPPPPPGRTPGPPGMPG 325
Query: 963 XPPTRRXXVXXPP 1001
PP PP
Sbjct: 326 MPPPPPPSRFGPP 338
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -3
Query: 843 GXGAGPXXXGAPXRXSEGGPX*XXRIKAXGAGXWGXGXXSXXGAXXRCXXGXGXWXXXAX 664
G G GP G GG G G WG G G G G W
Sbjct: 24 GWGGGPGRWGGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGG 83
Query: 663 XXGXXGGGGXXXXXGXXXG 607
G GG G G G
Sbjct: 84 GRGDWGGNGGGGRGGGGRG 102
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.56
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +2
Query: 602 PXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXRXXQ 781
P P P PPPP P P P P P P P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 782 XGPPSXSLXGAPXXXGP 832
PP G P P
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 31.9 bits (69), Expect = 0.74
Identities = 24/85 (28%), Positives = 25/85 (29%)
Frame = +2
Query: 440 PXPPAXXXXXXAXPAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXX 619
P PP P P P LP P PG P + S P P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPP--PPPPPGGLPPI----SGGPPPPPPP--- 764
Query: 620 PXXXXXPPPPXXPXXXAXXXQXPXP 694
P PPPP P P P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.5 bits (63), Expect = 3.9
Identities = 26/95 (27%), Positives = 28/95 (29%)
Frame = +2
Query: 479 PAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXXPXXXXXPPPPXXP 658
P P P T P P PG P + + P P P P PPPP P
Sbjct: 713 PPPPPGLPPITGGPPPPPP----PGGLPPI----TGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 659 XXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXA 763
P P P P P AP A
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPP--PPPPPGMFAPMA 797
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.56
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +2
Query: 602 PXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXRXXQ 781
P P P PPPP P P P P P P P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 782 XGPPSXSLXGAPXXXGP 832
PP G P P
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 31.9 bits (69), Expect = 0.74
Identities = 24/85 (28%), Positives = 25/85 (29%)
Frame = +2
Query: 440 PXPPAXXXXXXAXPAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXX 619
P PP P P P LP P PG P + S P P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPP--PPPPPGGLPPI----SGGPPPPPPP--- 764
Query: 620 PXXXXXPPPPXXPXXXAXXXQXPXP 694
P PPPP P P P
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.5 bits (63), Expect = 3.9
Identities = 26/95 (27%), Positives = 28/95 (29%)
Frame = +2
Query: 479 PAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXXPXXXXXPPPPXXP 658
P P P T P P PG P + + P P P P PPPP P
Sbjct: 713 PPPPPGLPPITGGPPPPPP----PGGLPPI----TGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 659 XXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXA 763
P P P P P AP A
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPP--PPPPPGMFAPMA 797
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.56
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +2
Query: 602 PXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXRXXQ 781
P P P PPPP P P P P P P P P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 782 XGPPSXSLXGAPXXXGP 832
PP G P P
Sbjct: 357 PPPPGGFKGGPPPPPPP 373
Score = 31.9 bits (69), Expect = 0.74
Identities = 24/85 (28%), Positives = 25/85 (29%)
Frame = +2
Query: 440 PXPPAXXXXXXAXPAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXX 619
P PP P P P LP P PG P + S P P P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPP--PPPPPGGLPPI----SGGPPPPPPP--- 347
Query: 620 PXXXXXPPPPXXPXXXAXXXQXPXP 694
P PPPP P P P
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.5 bits (63), Expect = 3.9
Identities = 26/95 (27%), Positives = 28/95 (29%)
Frame = +2
Query: 479 PAPXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXXPXXXXXPPPPXXP 658
P P P T P P PG P + + P P P P PPPP P
Sbjct: 296 PPPPPGLPPITGGPPPPPP----PGGLPPI----TGGPPPPPPPGGLPPISGGPPPPPPP 347
Query: 659 XXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXA 763
P P P P P AP A
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPP--PPPPPGMFAPMA 380
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/122 (22%), Positives = 32/122 (26%)
Frame = +2
Query: 593 PKQPXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXR 772
P QP P P PP P P P P + AP A
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGA--- 202
Query: 773 XXQXGPPSXSLXGAPXXXGPAPXPXXGGXSSGXXSXXXXRXLAXGXRXAPPXXAXXSXSG 952
G P S G P GPA P G + + G + P G
Sbjct: 203 PGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADG 262
Query: 953 XP 958
P
Sbjct: 263 NP 264
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/122 (22%), Positives = 32/122 (26%)
Frame = +2
Query: 593 PKQPXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXR 772
P QP P P PP P P P P + AP A
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGA--- 202
Query: 773 XXQXGPPSXSLXGAPXXXGPAPXPXXGGXSSGXXSXXXXRXLAXGXRXAPPXXAXXSXSG 952
G P S G P GPA P G + + G + P G
Sbjct: 203 PGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADG 262
Query: 953 XP 958
P
Sbjct: 263 NP 264
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/122 (22%), Positives = 32/122 (26%)
Frame = +2
Query: 593 PKQPXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXR 772
P QP P P PP P P P P + AP A
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGA--- 202
Query: 773 XXQXGPPSXSLXGAPXXXGPAPXPXXGGXSSGXXSXXXXRXLAXGXRXAPPXXAXXSXSG 952
G P S G P GPA P G + + G + P G
Sbjct: 203 PGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADG 262
Query: 953 XP 958
P
Sbjct: 263 NP 264
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/122 (22%), Positives = 32/122 (26%)
Frame = +2
Query: 593 PKQPXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXR 772
P QP P P PP P P P P + AP A
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGA--- 202
Query: 773 XXQXGPPSXSLXGAPXXXGPAPXPXXGGXSSGXXSXXXXRXLAXGXRXAPPXXAXXSXSG 952
G P S G P GPA P G + + G + P G
Sbjct: 203 PGGPGEPGASEQGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPGADG 262
Query: 953 XP 958
P
Sbjct: 263 NP 264
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.7
Identities = 34/135 (25%), Positives = 35/135 (25%)
Frame = -3
Query: 843 GXGAGPXXXGAPXRXSEGGPX*XXRIKAXGAGXWGXGXXSXXGAXXRCXXGXGXWXXXAX 664
G G G AP GG G G G G C G G
Sbjct: 63 GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Query: 663 XXGXXGGGGXXXXXGXXXGXGCLGXXXEKKKXXAGXXPGXVXVLXGAXGXXVGXXAXGXG 484
G GGGG G G G G G G G G G + G G
Sbjct: 123 GCGG-GGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG-GCGGGGGGGCGGGSSGGGG 180
Query: 483 AGXAXXXXXXAGGXG 439
A GG G
Sbjct: 181 YAVAPSGGGGCGGGG 195
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.7
Identities = 34/135 (25%), Positives = 35/135 (25%)
Frame = -3
Query: 843 GXGAGPXXXGAPXRXSEGGPX*XXRIKAXGAGXWGXGXXSXXGAXXRCXXGXGXWXXXAX 664
G G G AP GG G G G G C G G
Sbjct: 63 GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGG 122
Query: 663 XXGXXGGGGXXXXXGXXXGXGCLGXXXEKKKXXAGXXPGXVXVLXGAXGXXVGXXAXGXG 484
G GGGG G G G G G G G G G + G G
Sbjct: 123 GCGG-GGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG-GCGGGGGGGCGGGSSGGGG 180
Query: 483 AGXAXXXXXXAGGXG 439
A GG G
Sbjct: 181 YAVAPSGGGGCGGGG 195
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 3.0
Identities = 25/105 (23%), Positives = 29/105 (27%), Gaps = 4/105 (3%)
Frame = +2
Query: 485 PXPXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXX----PXXXXXPPPPX 652
P P +P P PG P F+ P P P PPPP
Sbjct: 59 PKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
Query: 653 XPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXRXXQXG 787
P Q P P + A L P F + Q G
Sbjct: 119 PPSGLGVAPQPPRPKTPVNPALAKLGGKNPGTVDRGEFLKGIQGG 163
Score = 28.7 bits (61), Expect = 6.9
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Frame = +3
Query: 714 PXXGSXXPXPTX-----PPXXPLXGXLXGGXPPXPSXGXPXXXXPXPALXVXVXPP 866
P G P P PP P+ G G PP P G P P L V PP
Sbjct: 78 PGPGGIPPPPPMFAGGIPPPPPMMG---GIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.9
Identities = 39/162 (24%), Positives = 44/162 (27%), Gaps = 5/162 (3%)
Frame = +2
Query: 518 PXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPX 697
P AP + PG A+ P +P P P PP P P A P
Sbjct: 126 PGAPGNPGA-PGKGAAVPCEAKTPPPCKPCPAGPPG----PPGPDGPAGPAG----PDGE 176
Query: 698 LHLXXAPXXLXXPXPHXPA-----PXAFXRXXQXGPPSXSLXGAPXXXGPAPXPXXGGXS 862
AP P P PA A GP S P GPA P G
Sbjct: 177 AGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPP 236
Query: 863 SGXXSXXXXRXLAXGXRXAPPXXAXXSXSGXPRXSXXPSXXG 988
+ A G P G P + P G
Sbjct: 237 GPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPPGKAG 278
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 1/71 (1%)
Frame = +2
Query: 602 PXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXL-XXPXPHXPAPXAFXRXX 778
P P P PPPP A P P P L P P P P
Sbjct: 531 PRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPP 590
Query: 779 QXGPPSXSLXG 811
PP L G
Sbjct: 591 PPPPPPGGLMG 601
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 5.2
Identities = 23/97 (23%), Positives = 25/97 (25%), Gaps = 3/97 (3%)
Frame = +2
Query: 524 APXSTXTXPGXXPA---LXFFFSXXXPKQPXPXXXPXXXXXPPPPXXPXXXAXXXQXPXP 694
AP + P P L + P P P PPPP P P
Sbjct: 463 APINANAPPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPP 522
Query: 695 XLHLXXAPXXLXXPXPHXPAPXAFXRXXQXGPPSXSL 805
AP P P P P PP L
Sbjct: 523 PPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPL 559
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = -3
Query: 756 GAGXWGXGXXSXXGAXXRCXXGXGXWXXXAXXXGXXGGGGXXXXXGXXXG 607
G G WG G R G G G GGGG G G
Sbjct: 77 GGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 6.9
Identities = 21/78 (26%), Positives = 24/78 (30%), Gaps = 1/78 (1%)
Frame = +2
Query: 428 SXXTPXPPAXXXXXXAXPAPXPXAXLP-TXXPXAPXSTXTXPGXXPALXFFFSXXXPKQP 604
S P PP + P P P +P T P +P P P P P
Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSP--PPRRPPMTPPSPQRRPPRTPPSP 178
Query: 605 XPXXXPXXXXXPPPPXXP 658
P P P PP P
Sbjct: 179 EPRNPPRTPPSPIPPPPP 196
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 593 PKQPXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXP 742
P P P PPPP P P P L L L P P
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPTP 118
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +3
Query: 741 PTXPPXXPLXGXLXGGXPPXPSXGXPXXXXPXPALXVXVXPPA---XXPXPR 887
P PP PL L PP P P P P + + P+ P PR
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPTPR 119
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.3 bits (60), Expect = 9.1
Identities = 21/82 (25%), Positives = 26/82 (31%)
Frame = +2
Query: 593 PKQPXPXXXPXXXXXPPPPXXPXXXAXXXQXPXPXLHLXXAPXXLXXPXPHXPAPXAFXR 772
P +P P PPP Q P P + A + P P P
Sbjct: 247 PPKPIVQQAPVVQQAPPPKQQQAQAQPVQQPPNPAPVVQQASAPVQQAPPK-PVPQQTP- 304
Query: 773 XXQXGPPSXSLXGAPXXXGPAP 838
Q PP ++ AP PAP
Sbjct: 305 PVQQAPPKPAVQQAPTRAAPAP 326
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.3 bits (60), Expect = 9.1
Identities = 25/88 (28%), Positives = 25/88 (28%)
Frame = +2
Query: 491 PXAXLPTXXPXAPXSTXTXPGXXPALXFFFSXXXPKQPXPXXXPXXXXXPPPPXXPXXXA 670
P A LP P P S P PA P P P PPPP P
Sbjct: 85 PPAPLPPPPP--PASPCCGPSPVPA---------PCCPPPPAPAAPCCPPPPPPTPSPLV 133
Query: 671 XXXQXPXPXLHLXXAPXXLXXPXPHXPA 754
Q P P P P PA
Sbjct: 134 CCKQAPVPENPCCQIVAAAMPPPPSAPA 161
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 735 PXPTXPPXXPLXGXLXGGXPPXPSXG 812
P P P PL L GG PP P G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLG 796
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 735 PXPTXPPXXPLXGXLXGGXPPXPSXG 812
P P P PL L GG PP P G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLG 796
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,549,557
Number of Sequences: 27780
Number of extensions: 197391
Number of successful extensions: 731
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2626021738
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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