Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_J12
         (807 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817...    33   0.27 
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554...    32   0.62 
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248...    31   0.82 
11_01_0385 + 2915532-2916482                                           29   4.4  
08_01_0426 - 3757110-3758405                                           29   5.8  
02_01_0120 + 884467-887649                                             29   5.8  

>07_01_0971 +
           8169197-8169311,8170351-8170458,8170533-8170725,
           8170811-8171069,8171151-8171207,8171433-8171480,
           8171571-8171657,8171743-8171800,8171891-8171958,
           8172066-8172161,8172244-8172291,8172658-8172696,
           8172782-8172868,8173136-8173147
          Length = 424

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +2

Query: 188 DDSWESNWVYSEHPGKE--FGKLN*LLESSSATQXMTRFETSEDAXVYAPSRKFKPFSN 358
           +D WES WV SE    E   G+ N      +        +TSED   YA S ++  FSN
Sbjct: 38  EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPEDKGIQTSEDYRFYAISAEYPEFSN 96


>05_06_0014 +
           24854462-24854570,24854958-24855065,24855240-24855432,
           24855892-24856150,24856236-24856292,24856370-24856417,
           24856725-24856811,24856885-24856942,24857084-24857151,
           24857279-24857374,24857483-24857539,24857906-24857952,
           24858184-24858210,24858312-24858504
          Length = 468

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = +2

Query: 188 DDSWESNWVYSEHPGKE--FGKLN*LLESSSATQXMTRFETSEDAXVYAPSRKFKPFSN 358
           DD W S WV S+    E   G       S S        +T+ DA  +A S KF  FSN
Sbjct: 36  DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDPDDRGIQTTSDAKHFAISAKFPEFSN 94


>01_06_1654 -
           38924090-38924101,38924183-38924215,38924737-38924829,
           38924909-38924965,38925048-38925143,38925237-38925304,
           38925429-38925486,38925572-38925658,38925935-38925982,
           38926060-38926116,38926200-38926458,38926666-38926858,
           38926991-38927098,38927849-38927957
          Length = 425

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
 Frame = +2

Query: 122 RLSACWPIIFDKL*CIL*GEVPDDSWESNWVYSEHPGKEFGKLN*LLESS---SATQXMT 292
           R  A W ++      ++  E  +D WES WV S+    E GK      ++   S      
Sbjct: 14  RFIALWSLLLIAAGEVIFEERFEDGWESRWVKSDWKRSE-GKAGTFKHTAGRYSGDPDDK 72

Query: 293 RFETSEDAXVYAPSRKFKPFSNXG 364
             +T+ DA  +A S K   FSN G
Sbjct: 73  GIQTTLDARHFAISAKIPEFSNKG 96


>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/38 (31%), Positives = 13/38 (34%)
 Frame = -3

Query: 526 GTLWXPGPKX*GGKNXXWXFPGXSXWSSXSQNPGFPPP 413
           G  W P P         W  PG + W      P  PPP
Sbjct: 197 GNKWPPLPPFHPPPTPAWPHPGGNKWPPLPPFPSHPPP 234


>08_01_0426 - 3757110-3758405
          Length = 431

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -2

Query: 314 HLQRFQTLSSSGSLKNFPAVNLTFQILFLGAHCTPNCFPTNH 189
           HLQ F+       L    A +L   +LFLG H    CFP  H
Sbjct: 323 HLQIFKVDGGEQKLVEASAASLEDHVLFLG-HGFSACFPAEH 363


>02_01_0120 + 884467-887649
          Length = 1060

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
 Frame = +3

Query: 30  GIP*DXDSWPVFLFEEXGTCESENESCCTWLG--CQLAGQLSSI 155
           G+    D WP  +     +  S+   CC W G  C  AG++  +
Sbjct: 44  GLDGGVDGWPAGVGNASSSSTSDGGDCCAWRGVACDEAGEVVGV 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,055,964
Number of Sequences: 37544
Number of extensions: 302598
Number of successful extensions: 546
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)