Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_J12
         (807 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M84739-1|AAA51916.1|  417|Homo sapiens calreticulin protein.           41   0.005
M32294-1|AAA36582.1|  417|Homo sapiens protein ( Human Ro ribonu...    41   0.005
CR457070-1|CAG33351.1|  417|Homo sapiens CALR protein.                 41   0.005
BT007448-1|AAP36116.1|  417|Homo sapiens calreticulin protein.         41   0.005
BC020493-1|AAH20493.1|  417|Homo sapiens calreticulin protein.         41   0.005
BC007911-1|AAH07911.1|  417|Homo sapiens calreticulin protein.         41   0.005
BC002500-1|AAH02500.1|  417|Homo sapiens calreticulin protein.         41   0.005
AY047586-1|AAL13126.1|  417|Homo sapiens calreticulin protein.         41   0.005
AK223060-1|BAD96780.1|  406|Homo sapiens calreticulin precursor ...    41   0.005
AD000092-6|AAB51176.1|  417|Homo sapiens calreticulin protein.         41   0.005
AB014557-1|BAA31632.2| 1237|Homo sapiens KIAA0657 protein protein.     34   0.69 

>M84739-1|AAA51916.1|  417|Homo sapiens calreticulin protein.
          Length = 417

 Score = 41.1 bits (92), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 191 DSWESNWVYSEHPGKEFGKLN*LLESSSATQXMTR---FETSEDAXVYAPSRKFKPFSNX 361
           D W S W+ S+H   +FGK   +L S        +    +TS+DA  YA S  F+PFSN 
Sbjct: 31  DGWTSRWIESKHKS-DFGKF--VLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNK 87

Query: 362 G 364
           G
Sbjct: 88  G 88


>M32294-1|AAA36582.1|  417|Homo sapiens protein ( Human Ro
           ribonucleoprotein autoantigen (Ro/SS-A), complete cds.
           ).
          Length = 417

 Score = 41.1 bits (92), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 191 DSWESNWVYSEHPGKEFGKLN*LLESSSATQXMTR---FETSEDAXVYAPSRKFKPFSNX 361
           D W S W+ S+H   +FGK   +L S        +    +TS+DA  YA S  F+PFSN 
Sbjct: 31  DGWTSRWIESKHKS-DFGKF--VLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNK 87

Query: 362 G 364
           G
Sbjct: 88  G 88


>CR457070-1|CAG33351.1|  417|Homo sapiens CALR protein.
          Length = 417

 Score = 41.1 bits (92), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 191 DSWESNWVYSEHPGKEFGKLN*LLESSSATQXMTR---FETSEDAXVYAPSRKFKPFSNX 361
           D W S W+ S+H   +FGK   +L S        +    +TS+DA  YA S  F+PFSN 
Sbjct: 31  DGWTSRWIESKHKS-DFGKF--VLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNK 87

Query: 362 G 364
           G
Sbjct: 88  G 88


>BT007448-1|AAP36116.1|  417|Homo sapiens calreticulin protein.
          Length = 417

 Score = 41.1 bits (92), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 191 DSWESNWVYSEHPGKEFGKLN*LLESSSATQXMTR---FETSEDAXVYAPSRKFKPFSNX 361
           D W S W+ S+H   +FGK   +L S        +    +TS+DA  YA S  F+PFSN 
Sbjct: 31  DGWTSRWIESKHKS-DFGKF--VLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNK 87

Query: 362 G 364
           G
Sbjct: 88  G 88


>BC020493-1|AAH20493.1|  417|Homo sapiens calreticulin protein.
          Length = 417

 Score = 41.1 bits (92), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 191 DSWESNWVYSEHPGKEFGKLN*LLESSSATQXMTR---FETSEDAXVYAPSRKFKPFSNX 361
           D W S W+ S+H   +FGK   +L S        +    +TS+DA  YA S  F+PFSN 
Sbjct: 31  DGWTSRWIESKHKS-DFGKF--VLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNK 87

Query: 362 G 364
           G
Sbjct: 88  G 88


>BC007911-1|AAH07911.1|  417|Homo sapiens calreticulin protein.
          Length = 417

 Score = 41.1 bits (92), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 191 DSWESNWVYSEHPGKEFGKLN*LLESSSATQXMTR---FETSEDAXVYAPSRKFKPFSNX 361
           D W S W+ S+H   +FGK   +L S        +    +TS+DA  YA S  F+PFSN 
Sbjct: 31  DGWTSRWIESKHKS-DFGKF--VLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNK 87

Query: 362 G 364
           G
Sbjct: 88  G 88


>BC002500-1|AAH02500.1|  417|Homo sapiens calreticulin protein.
          Length = 417

 Score = 41.1 bits (92), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 191 DSWESNWVYSEHPGKEFGKLN*LLESSSATQXMTR---FETSEDAXVYAPSRKFKPFSNX 361
           D W S W+ S+H   +FGK   +L S        +    +TS+DA  YA S  F+PFSN 
Sbjct: 31  DGWTSRWIESKHKS-DFGKF--VLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNK 87

Query: 362 G 364
           G
Sbjct: 88  G 88


>AY047586-1|AAL13126.1|  417|Homo sapiens calreticulin protein.
          Length = 417

 Score = 41.1 bits (92), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 191 DSWESNWVYSEHPGKEFGKLN*LLESSSATQXMTR---FETSEDAXVYAPSRKFKPFSNX 361
           D W S W+ S+H   +FGK   +L S        +    +TS+DA  YA S  F+PFSN 
Sbjct: 31  DGWTSRWIESKHKS-DFGKF--VLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNK 87

Query: 362 G 364
           G
Sbjct: 88  G 88


>AK223060-1|BAD96780.1|  406|Homo sapiens calreticulin precursor
           variant protein.
          Length = 406

 Score = 41.1 bits (92), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 191 DSWESNWVYSEHPGKEFGKLN*LLESSSATQXMTR---FETSEDAXVYAPSRKFKPFSNX 361
           D W S W+ S+H   +FGK   +L S        +    +TS+DA  YA S  F+PFSN 
Sbjct: 20  DGWTSRWIESKHKS-DFGKF--VLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNK 76

Query: 362 G 364
           G
Sbjct: 77  G 77


>AD000092-6|AAB51176.1|  417|Homo sapiens calreticulin protein.
          Length = 417

 Score = 41.1 bits (92), Expect = 0.005
 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +2

Query: 191 DSWESNWVYSEHPGKEFGKLN*LLESSSATQXMTR---FETSEDAXVYAPSRKFKPFSNX 361
           D W S W+ S+H   +FGK   +L S        +    +TS+DA  YA S  F+PFSN 
Sbjct: 31  DGWTSRWIESKHKS-DFGKF--VLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNK 87

Query: 362 G 364
           G
Sbjct: 88  G 88


>AB014557-1|BAA31632.2| 1237|Homo sapiens KIAA0657 protein protein.
          Length = 1237

 Score = 33.9 bits (74), Expect = 0.69
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 96   ENESCCTWLGCQLAGQLSSINCDVFFEEKFLMIRGKAIGCTVST 227
            + +SCC++ GC++ GQ  +  C   + +   + RG   GC V +
Sbjct: 1148 QRQSCCSYGGCRMCGQRKARTCVSKWRQAEWVQRGPCAGCEVGS 1191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,497,023
Number of Sequences: 237096
Number of extensions: 1852335
Number of successful extensions: 2618
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2607
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)