Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_J10
(817 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 44 2e-04
07_03_1136 + 24218601-24218734,24218769-24219906 42 6e-04
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.039
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.27
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 32 0.63
11_06_0184 - 21006659-21009823 30 1.9
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 1.9
12_02_1174 - 26696869-26698191 30 2.5
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 4.4
01_01_0715 - 5542648-5543219,5543352-5543544 29 4.4
08_02_1371 + 26493981-26494471,26497374-26497504,26497947-26498692 29 5.8
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 5.8
07_01_0862 - 7172083-7172931 28 7.7
04_03_0801 - 19828175-19828770,19828913-19828994 28 7.7
02_05_0282 - 27454714-27455814 28 7.7
01_06_1073 - 34300089-34300235,34300783-34301031,34302509-343027... 28 7.7
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/104 (28%), Positives = 35/104 (33%), Gaps = 1/104 (0%)
Frame = +1
Query: 463 GFXPPPXNFXXGVGGXFFPXGTXPGNFXPPXXPXNXKIFPPLFXXIXKXLWGXXPPXPPG 642
G PPP + G P G G PP P + + + G PP P G
Sbjct: 1096 GVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVG 1155
Query: 643 GKKXXXXPPXP-XXKKKKXXPXXXGXKXXPPPXXXGGGGXXAPP 771
G PP P + P G PPP G GG PP
Sbjct: 1156 GLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPP 1199
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +3
Query: 699 PXPGGXKXXPPPPPXGG-GGXXRP 767
P PGG PPPPP GG GG P
Sbjct: 1113 PPPGGITGVPPPPPIGGLGGHQAP 1136
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = +1
Query: 625 PPXPPGGKKXXXXPPXPXXKKKKXXPXXXGXKXXPPPXXXGGGGXXAPPXFXG 783
PP PP G PP P P G PPP GG G APP G
Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPPMPP--GVPGGPPPP-PGGRGLPAPPGGRG 1234
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -3
Query: 782 PXKXGGAXXPPPPXXXGGGXXFXPXXXGXXFFFFXXGXGGXXXXFFPPGGXGGXXP 615
P GG PPPP GG P G G G PPGG G P
Sbjct: 1176 PNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP--PPGGRGLPAP 1229
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 41.9 bits (94), Expect = 6e-04
Identities = 34/110 (30%), Positives = 37/110 (33%), Gaps = 2/110 (1%)
Frame = -3
Query: 782 PXKXGGAXXPP--PPXXXGGGXXFXPXXXGXXFFFFXXGXGGXXXXFFPPGGXGGXXPQR 609
P GG PP PP GGG P G G GG GG GG +
Sbjct: 108 PPGGGGGGGPPSLPPGAGGGGGARPPAPGGG-------GGGGAPRRVLGGGGGGGALARP 160
Query: 608 XFXMXKKRGGKIXXXXGFXGGXKXPGXVPXGKNXPPTPXKKXXGGGXNPG 459
RGG + G GG PG P G P + GGG G
Sbjct: 161 P---GGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGG 207
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 699 PXPGGXKXXPPPPPXGGGGXXRPSXFXGG 785
P GG PP P GGGG P GG
Sbjct: 122 PGAGGGGGARPPAPGGGGGGGAPRRVLGG 150
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 699 PXPGGXKXXPP--PPPXGGGGXXRPSXFXGG 785
P GG PP PP GGGG RP GG
Sbjct: 108 PPGGGGGGGPPSLPPGAGGGGGARPPAPGGG 138
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.9 bits (79), Expect = 0.039
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 666 PLPXXKKKKXTPXPGGXKXXPPPPPXGGGGXXRPS 770
P P P PGG K PPPPP GG P+
Sbjct: 357 PPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPA 391
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 626 PPXPRGEKKXXXXPPXRXKKKKXHXPPXXGKKXPPPPXXXGGGXXXP 766
PP P K PP + PP K PPPP GG P
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 628 PXPPGGKKXXXXPPXPXXKKKKXXPXXXGXKXXPPPXXXGGGGXXAP 768
P PP K PP P P G K PPP GG P
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 625 PPXPPGGKKXXXXPPXPXXKKKKXXPXXXGXKXXPPPXXXGGGGXXAPP 771
PP PP G PP P K P G PPP G G PP
Sbjct: 337 PPPPPKGP-----PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 666 PLPXXKKKKXTPXPGGXKXXPPPPPXGGGGXXRPSXFXGG 785
P P K P P G PPPPP G G P GG
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 625 PPXPPGGKKXXXXPPXPXXKKKKXXPXXXGXKXXPPPXXXGGGGXXAPP 771
PP PP K PP P K P K PPP G PP
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPP--PKGPPPPPPAKGPPPPPPP 359
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 614 GGXXPPXPRGEKKXXXXPPXRXKKKKXHXPPXXGKKXPP 730
G PP P+G PP K PP G PP
Sbjct: 352 GPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 33.1 bits (72), Expect = 0.27
Identities = 27/103 (26%), Positives = 27/103 (26%), Gaps = 1/103 (0%)
Frame = +1
Query: 472 PPPXNFXXGVGGXFFPXGTXPGNFXPPXXPXNXKIFPPLFXXIXKXLWGXXPPXPPGGKK 651
PPP G G P PP P PP PP PP
Sbjct: 303 PPPHPLPPGAGAGAGTGAPPP----PPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAP 358
Query: 652 XXXXPPXPXX-KKKKXXPXXXGXKXXPPPXXXGGGGXXAPPXF 777
PP P G PPP GG PP F
Sbjct: 359 AAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPPF 401
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
Frame = +1
Query: 625 PPXPP---GGKKXXXXPPXPXXKKKKXXPXXXGXKXXPPPXXXG-GGGXXAPPXFXG 783
PP P G PP P P G PPP G GGG PP G
Sbjct: 335 PPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPG 391
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 666 PLPXXKKKKXTPXPGGXKXXPPPPPXGGG-GXXRPS 770
P P + P P + PPPPP G G G RPS
Sbjct: 26 PKPTPIRNPTPPPPPPRRRTPPPPPPGSGPGPQRPS 61
>11_06_0184 - 21006659-21009823
Length = 1054
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +1
Query: 628 PXPPG-GKKXXXXPPXPXXKKKKXXPXXXGXKXXPPPXXXGGGGXXAPPXFXG 783
P PP G K P K++ P G PPP GG PP G
Sbjct: 277 PLPPDCGVKRQLPPQSDGDDKQQPPPQSDGSDQPPPPQPDGGDTEQQPPQSDG 329
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 1.9
Identities = 31/111 (27%), Positives = 32/111 (28%), Gaps = 7/111 (6%)
Frame = +1
Query: 472 PPPXNFXXGVGGXFFPXGTXPGNFXPPXXPXNXKIFP--PLFXXIXKXLWGXXPPXPPG- 642
PPP G P P PP N P PL + PP PP
Sbjct: 694 PPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPP 753
Query: 643 ----GKKXXXXPPXPXXKKKKXXPXXXGXKXXPPPXXXGGGGXXAPPXFXG 783
GKK PP P K PPP G G PP G
Sbjct: 754 PLMTGKKAPAPPPPPPQAPKPPGTVP------PPPPLHGASGRPHPPSSKG 798
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 626 PPXPRGEKKXXXXPPXRXKKKKXHXPPXXGKKXPPPP 736
PP P + PP R K PP PPPP
Sbjct: 124 PPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPP 160
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 696 TPXPGGXKXXPPPPPXGGGGXXRP 767
TP P PPP P GGGG P
Sbjct: 728 TPSPPEYAPEPPPGPPGGGGGYLP 751
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 699 PXPGGXKXXPPPPPXGGGGXXRPSXFXG 782
P P G PPPPP GG PS G
Sbjct: 182 PAPAG-SPPPPPPPPAGGNFTAPSPAGG 208
>08_02_1371 + 26493981-26494471,26497374-26497504,26497947-26498692
Length = 455
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 726 PPPPPXGGGGXXRPSXFXGG 785
PPPPP GGGG F G
Sbjct: 304 PPPPPHGGGGSGGGKMFSDG 323
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 699 PXPGGXKXXPPPPPXGGGGXXRPSXFXGG 785
P PGG PPP GGGG GG
Sbjct: 386 PMPGGGGPGAPPPYHGGGGGGGGGGGGGG 414
>07_01_0862 - 7172083-7172931
Length = 282
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = +2
Query: 578 FXPFFXPXKKXFGGXXPPXPRGEKKXXXXPPXRXKKKKXHXPPXXGKKXPPP 733
F P P KK P PR KK PP KKK PP + P P
Sbjct: 146 FPPPLPPRKKAMLFPLPLPPR--KKPLLYPPPLPPKKKPLPPPSPPPQPPLP 195
>04_03_0801 - 19828175-19828770,19828913-19828994
Length = 225
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 681 KKKKXTPXPGGXKXXPPPPPXGGGG 755
KK +P P + PPPP GGGG
Sbjct: 188 KKPCCSPPPCPWQPVCPPPPCGGGG 212
>02_05_0282 - 27454714-27455814
Length = 366
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 699 PXPGGXKXXPPPPPXGGGGXXRP 767
P P G PPPPP RP
Sbjct: 10 PNPNGSSNQPPPPPSSAASAQRP 32
>01_06_1073 -
34300089-34300235,34300783-34301031,34302509-34302780,
34303131-34303182,34303272-34303349,34303659-34303718,
34303801-34303875,34304382-34304585,34304694-34304767,
34304992-34305095,34305261-34305334,34305407-34305473,
34306024-34306127
Length = 519
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 293 SNAC*LITSPFQFTHYLPXVSVANTARQTSVTV 195
SNA +I P QF +Y+ +S +N +VTV
Sbjct: 124 SNAHTIINDPLQFENYVKSISPSNITTTATVTV 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,835,076
Number of Sequences: 37544
Number of extensions: 507344
Number of successful extensions: 2492
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2032
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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