Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_J07
         (966 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125...    31   1.8  
09_03_0171 - 13062794-13064017                                         29   4.2  
05_06_0273 - 26851077-26851167,26851433-26851869,26852125-268522...    28   9.7  
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865...    28   9.7  

>04_04_0729 +
           27612106-27612195,27612284-27612370,27612469-27612528,
           27612554-27612688,27612769-27612864,27613149-27613214,
           27613647-27613864,27614093-27614189,27614605-27614691,
           27614892-27615026,27615121-27615225,27615717-27615845,
           27615925-27616028,27616598-27616688,27616774-27616857
          Length = 527

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = +1

Query: 382 CEECFTKFNGILKFREACKIVEYQLIQLKNKLQKSDL 492
           C  CFT     L  REACK VE +L    +KL K  L
Sbjct: 97  CLTCFTIIYYQLAMREACKYVEEKLAVKVDKLGKDSL 133


>09_03_0171 - 13062794-13064017
          Length = 407

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/75 (22%), Positives = 33/75 (44%)
 Frame = +1

Query: 439 IVEYQLIQLKNKLQKSDLHFANDSEQGNLNDASENTHGYKTIIQIDNDCVTKKEEKILEC 618
           +V Y++I   +K    D +   D E+  L+   EN+H    +    +DC    E+    C
Sbjct: 29  LVAYRIIDTDDKGNTDDEYCPIDDEEEELDHGDENSHDEDIVDNDKDDCDLGDEDDNHTC 88

Query: 619 LMENDEMNNSLDSEN 663
             + D  +++   E+
Sbjct: 89  ERDYDGSDDAGTEES 103


>05_06_0273 -
           26851077-26851167,26851433-26851869,26852125-26852271,
           26852352-26854415,26854792-26854908,26855007-26855093,
           26855350-26855439,26855523-26855609,26856736-26856810
          Length = 1064

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/47 (23%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = +1

Query: 364 GLPQNICEECFTKF----NGILKFREACKIVEYQLIQLKNKLQKSDL 492
           G P  +C+ CF K      G++       ++  + I +K+KL++ ++
Sbjct: 671 GKPHRVCDSCFMKLKAADTGVISSYNKRNVITRRSIDIKDKLERPEI 717


>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
            30286718-30287042,30287563-30287818,30287901-30288117,
            30288743-30289095,30289330-30289833,30291267-30292467,
            30292614-30292970,30293258-30293495,30294083-30295125,
            30295234-30296649,30296731-30296855,30297036-30297314,
            30297352-30297382,30298957-30299022,30299447-30299689,
            30299848-30299898,30299980-30300071,30300182-30300249,
            30300515-30300600,30300720-30300824,30300994-30301127,
            30302403-30302436,30302620-30302892,30303019-30303288,
            30303384-30303974,30304065-30304214
          Length = 3376

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 412  ILKFREACKIVEYQLIQLKNKLQKSDLHFANDSEQGNLN 528
            +L+ R  CK VE Q ++ K  L   DLH   +   G  N
Sbjct: 2537 MLELRHICKQVEEQHVREKRALSVKDLHSNREHGDGEKN 2575


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,139,261
Number of Sequences: 37544
Number of extensions: 253318
Number of successful extensions: 536
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)