Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_J07
         (966 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005176-1|AAH05176.1|  570|Homo sapiens transmembrane 7 superfa...    33   1.2  
AK002031-1|BAA92046.1|  570|Homo sapiens protein ( Homo sapiens ...    33   1.2  
AB032470-1|BAA92856.1|  570|Homo sapiens seven transmembrane pro...    33   1.2  
Z20656-1|CAA79675.1| 1939|Homo sapiens cardiac alpha-myosin heav...    31   8.3  
D00943-1|BAA00791.1| 1939|Homo sapiens cardiac alpha-myosin heav...    31   8.3  
BC132667-1|AAI32668.1| 1939|Homo sapiens myosin, heavy chain 6, ...    31   8.3  

>BC005176-1|AAH05176.1|  570|Homo sapiens transmembrane 7
           superfamily member 3 protein.
          Length = 570

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = -2

Query: 476 SLFFNCMS*YSTILHASLNLSIPLNFVK--HSSHMFWGSPSFLSTLIPCNYINCCRIINL 303
           S+   C+      L +S+    PL  +K  H   +FW + S ++ LIP  ++ C RI+N+
Sbjct: 373 SICMLCVGLVLGFLISSVTFFTPLGNLKIFHDDGVFWVTFSCIAILIPVVFMGCLRILNI 432

Query: 302 I 300
           +
Sbjct: 433 L 433


>AK002031-1|BAA92046.1|  570|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11169 fis, clone PLACE1007282. ).
          Length = 570

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = -2

Query: 476 SLFFNCMS*YSTILHASLNLSIPLNFVK--HSSHMFWGSPSFLSTLIPCNYINCCRIINL 303
           S+   C+      L +S+    PL  +K  H   +FW + S ++ LIP  ++ C RI+N+
Sbjct: 373 SICMLCVGLVLGFLISSVTFFTPLGNLKIFHDDGVFWVTFSCIAILIPVVFMGCLRILNI 432

Query: 302 I 300
           +
Sbjct: 433 L 433


>AB032470-1|BAA92856.1|  570|Homo sapiens seven transmembrane
           protein TM7SF3 protein.
          Length = 570

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = -2

Query: 476 SLFFNCMS*YSTILHASLNLSIPLNFVK--HSSHMFWGSPSFLSTLIPCNYINCCRIINL 303
           S+   C+      L +S+    PL  +K  H   +FW + S ++ LIP  ++ C RI+N+
Sbjct: 373 SICMLCVGLVLGFLISSVTFFTPLGNLKIFHDDGVFWVTFSCIAILIPVVFMGCLRILNI 432

Query: 302 I 300
           +
Sbjct: 433 L 433


>Z20656-1|CAA79675.1| 1939|Homo sapiens cardiac alpha-myosin heavy
            chain protein.
          Length = 1939

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
 Frame = +1

Query: 385  EECFTKFNGILKFREAC-KIVEYQLIQLKNKLQKSDLHFANDSEQGNLNDASENTHG-YK 558
            +E F +    L+  EA  K +E +++ L    +K+DL     +EQ NLNDA E      K
Sbjct: 855  KEEFGRIKETLEKSEARRKELEEKMVSLLQ--EKNDLQLQVQAEQDNLNDAEERCDQLIK 912

Query: 559  TIIQIDNDCVTKKEEKILECLMENDEMNNSLDSE 660
              IQ++      K +++ E L + +EMN  L ++
Sbjct: 913  NKIQLE-----AKVKEMNERLEDEEEMNAELTAK 941


>D00943-1|BAA00791.1| 1939|Homo sapiens cardiac alpha-myosin heavy
            chain protein.
          Length = 1939

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
 Frame = +1

Query: 385  EECFTKFNGILKFREAC-KIVEYQLIQLKNKLQKSDLHFANDSEQGNLNDASENTHG-YK 558
            +E F +    L+  EA  K +E +++ L    +K+DL     +EQ NLNDA E      K
Sbjct: 855  KEEFGRIKETLEKSEARRKELEEKMVSLLQ--EKNDLQLQVQAEQDNLNDAEERCDQLIK 912

Query: 559  TIIQIDNDCVTKKEEKILECLMENDEMNNSLDSE 660
              IQ++      K +++ E L + +EMN  L ++
Sbjct: 913  NKIQLE-----AKVKEMNERLEDEEEMNAELTAK 941


>BC132667-1|AAI32668.1| 1939|Homo sapiens myosin, heavy chain 6,
            cardiac muscle, alpha (cardiomyopathy, hypertrophic 1)
            protein.
          Length = 1939

 Score = 30.7 bits (66), Expect = 8.3
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
 Frame = +1

Query: 385  EECFTKFNGILKFREAC-KIVEYQLIQLKNKLQKSDLHFANDSEQGNLNDASENTHG-YK 558
            +E F +    L+  EA  K +E +++ L    +K+DL     +EQ NLNDA E      K
Sbjct: 855  KEEFGRIKETLEKSEARRKELEEKMVSLLQ--EKNDLQLQVQAEQDNLNDAEERCDQLIK 912

Query: 559  TIIQIDNDCVTKKEEKILECLMENDEMNNSLDSE 660
              IQ++      K +++ E L + +EMN  L ++
Sbjct: 913  NKIQLE-----AKVKEMNERLEDEEEMNAELTAK 941


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,729,812
Number of Sequences: 237096
Number of extensions: 1526752
Number of successful extensions: 7179
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7179
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12825217482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)