Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_J06
         (915 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   1.0  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   3.2  
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       24   5.6  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 15/49 (30%), Positives = 20/49 (40%)
 Frame = -1

Query: 915 LPGKGHRXG*TGVXAXSPXWXERPTPXWXTYRGSYEKAPRFPEGKXGDR 769
           LPG+  + G  G    +    E   P W     S    P  P+G+ GDR
Sbjct: 551 LPGRPGKTGRDGPPGLTGEKGEPGLPVWKDRGPSGPSGPLGPQGEKGDR 599


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 714  PLDTPSCALLFRPCRLPDTCPPFSLRGSVGLSHSSPCRXPXSV 842
            P D  +   + +P RL  +     L+G +   HSS C  P SV
Sbjct: 1118 PCDLKTDLYVLQPERLNSSGQNNPLKGKLTNCHSSGCERPFSV 1160


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 202 YIDXFGQTTTKMX*KKCFICXIXDAIALFVT 294
           ++D  GQ T +    KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,712
Number of Sequences: 2352
Number of extensions: 11001
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)