Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_J05
(924 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.018
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.018
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 36 0.031
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.031
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.054
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.054
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.054
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 34 0.17
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.22
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 32 0.50
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 32 0.50
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 32 0.67
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 32 0.67
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.88
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.2
U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical pr... 31 1.2
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 31 1.2
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 31 1.2
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.0
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.0
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 4.7
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 4.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 4.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 4.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.1 bits (82), Expect = 0.018
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPPP G + P P PP + P P G PPP F P GG P
Sbjct: 287 PPPPPSSGMW-PPPPPPPPGRTPGPPGMPGMP--PPPPPSRFGPPGMGGMP 334
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPP 552
PPPP F G PP P R GG PPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPP 552
PPPP G P PP P G G PPP
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.1 bits (82), Expect = 0.018
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPPP G + P P PP + P P G PPP F P GG P
Sbjct: 297 PPPPPSSGMW-PPPPPPPPGRTPGPPGMPGMP--PPPPPSRFGPPGMGGMP 344
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPP 552
PPPP F G PP P R GG PPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPP 552
PPPP G P PP P G G PPP
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/48 (41%), Positives = 21/48 (43%)
Frame = -2
Query: 593 GXPPXXGXKXXPPXGGGKXXPPPXXRGXGXFXGGXGXGPXKKXPXXXG 450
G PP G + PP GG PPP G G GG G GP P G
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGG-PGGPG-GPGGMLPKSHG 226
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = -2
Query: 593 GXPPXXGXKXXPPXGGGKXXPPPXXRGXGXFXGGXGXGPXKKXPXXXGGGG 441
G PP G PP GG+ PP G G G G P + P GG G
Sbjct: 172 GGPPGHGGMGGPPGHGGQGGPP----GHG---GMGGPPPGQGGPGGPGGPG 215
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/48 (41%), Positives = 21/48 (43%)
Frame = -2
Query: 593 GXPPXXGXKXXPPXGGGKXXPPPXXRGXGXFXGGXGXGPXKKXPXXXG 450
G PP G + PP GG PPP G G GG G GP P G
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGG-PGGPG-GPGGMLPKSHG 506
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/51 (37%), Positives = 21/51 (41%)
Frame = -2
Query: 593 GXPPXXGXKXXPPXGGGKXXPPPXXRGXGXFXGGXGXGPXKKXPXXXGGGG 441
G PP G PP GG+ PP G G G G P + P GG G
Sbjct: 452 GGPPGHGGMGGPPGHGGQGGPP----GHG---GMGGPPPGQGGPGGPGGPG 495
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.054
Identities = 21/51 (41%), Positives = 21/51 (41%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPPP GP P PP P GG PPP GG P GG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGG--LPPISGGPP 759
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGG 561
PPPP GP P PP P GG PPP GG
Sbjct: 729 PPPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGG 767
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = +3
Query: 444 PPPXGXGXFFXGPXPLPP-----XKXPXPPXXGGGXGFSPP 551
PPP G GP P PP P PP GG G PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 593 GXPPXXGXKXXPPXGGGKXXPPPXXRGXGXFXGGXGXGP 477
G PP G PP G PPP G F GG P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 7/64 (10%)
Frame = +1
Query: 397 PXXGGGXXXFXXXKXPPPPXXXGFFFXGPXPXPP-----XKXPXPRXXGG--GXXFPPPX 555
P GG PPPP GP P PP P P GG G PPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Query: 556 GGXF 567
G F
Sbjct: 790 PGMF 793
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 444 PPPXGXGXFFXGPXPLPPXKXPXPPXXGGGXGFSPP 551
PPP G GP P PP PP GG PP
Sbjct: 714 PPPPGLPPITGGPPP-PPPPGGLPPITGGPPPPPPP 748
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 444 PPPXGXGXFFXGPXPLPPXKXPXPPXXGGGXGFSPPXXG 560
PPP G GP P PP PP GG PP G
Sbjct: 730 PPPGGLPPITGGPPP-PPPPGGLPPISGGPPP-PPPPPG 766
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.054
Identities = 21/51 (41%), Positives = 21/51 (41%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPPP GP P PP P GG PPP GG P GG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGG--LPPISGGPP 759
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGG 561
PPPP GP P PP P GG PPP GG
Sbjct: 729 PPPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGG 767
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = +3
Query: 444 PPPXGXGXFFXGPXPLPP-----XKXPXPPXXGGGXGFSPP 551
PPP G GP P PP P PP GG G PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 593 GXPPXXGXKXXPPXGGGKXXPPPXXRGXGXFXGGXGXGP 477
G PP G PP G PPP G F GG P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 7/64 (10%)
Frame = +1
Query: 397 PXXGGGXXXFXXXKXPPPPXXXGFFFXGPXPXPP-----XKXPXPRXXGG--GXXFPPPX 555
P GG PPPP GP P PP P P GG G PPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Query: 556 GGXF 567
G F
Sbjct: 790 PGMF 793
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 444 PPPXGXGXFFXGPXPLPPXKXPXPPXXGGGXGFSPP 551
PPP G GP P PP PP GG PP
Sbjct: 714 PPPPGLPPITGGPPP-PPPPGGLPPITGGPPPPPPP 748
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 444 PPPXGXGXFFXGPXPLPPXKXPXPPXXGGGXGFSPPXXG 560
PPP G GP P PP PP GG PP G
Sbjct: 730 PPPGGLPPITGGPPP-PPPPGGLPPISGGPPP-PPPPPG 766
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.054
Identities = 21/51 (41%), Positives = 21/51 (41%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPPP GP P PP P GG PPP GG P GG P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPPPGG--LPPISGGPP 342
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGG 561
PPPP GP P PP P GG PPP GG
Sbjct: 312 PPPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGG 350
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = +3
Query: 444 PPPXGXGXFFXGPXPLPP-----XKXPXPPXXGGGXGFSPP 551
PPP G GP P PP P PP GG G PP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -2
Query: 593 GXPPXXGXKXXPPXGGGKXXPPPXXRGXGXFXGGXGXGP 477
G PP G PP G PPP G F GG P
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/64 (34%), Positives = 22/64 (34%), Gaps = 7/64 (10%)
Frame = +1
Query: 397 PXXGGGXXXFXXXKXPPPPXXXGFFFXGPXPXPP-----XKXPXPRXXGG--GXXFPPPX 555
P GG PPPP GP P PP P P GG G PPP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Query: 556 GGXF 567
G F
Sbjct: 373 PGMF 376
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 444 PPPXGXGXFFXGPXPLPPXKXPXPPXXGGGXGFSPP 551
PPP G GP P PP PP GG PP
Sbjct: 297 PPPPGLPPITGGPPP-PPPPGGLPPITGGPPPPPPP 331
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 444 PPPXGXGXFFXGPXPLPPXKXPXPPXXGGGXGFSPPXXG 560
PPP G GP P PP PP GG PP G
Sbjct: 313 PPPGGLPPITGGPPP-PPPPGGLPPISGGPPP-PPPPPG 349
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +3
Query: 390 FFXXXGGGXGXFXXXKKXPPPXGXGXFFXGPXPLPPXKXP---XPPXXGGGXGFSPPXXG 560
F GGG G PPP G G P LP + P P GGG G P G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = +1
Query: 442 PPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXPQKKIF 609
PPPP G P PP P P GG PPP GG KKI+
Sbjct: 562 PPPPPPLPQNLSGAPPPPP---PPPPMLGGPPPPPPPPGGLMGPASNDAKTIKKIY 614
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +3
Query: 390 FFXXXGGGXGXFXXXKKXPPPXGXGXFFXGPXPLPPXKXP--XPPXXGGGXGFSPP 551
F GGG G PPP G G P LP + P P GGG G P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAP 72
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 32.3 bits (70), Expect = 0.50
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = +3
Query: 390 FFXXXGGGXGXFXXXKKXPPPXGXGXFFXGPXPLPPXKXP--XPPXXGGGXGFSPP 551
F GGG G PPP G G P LP + P P GGG G P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGAPALPPLQLPRFELPRLSLPSLGGGCGGPAP 72
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 456 GXGXFFXGPXPLPPXKXPXPPXXGGGXGFSPPXXG 560
G G + LPP P P GGG G++ P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 456 GXGXFFXGPXPLPPXKXPXPPXXGGGXGFSPPXXG 560
G G + LPP P P GGG G++ P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.88
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 408 GGXGXFXXXKKXPPPXGXGXFFXGPXPLPPXKXPXPPXXGGGXGFSP 548
GG G F PPP G G + P PP P PP G G +P
Sbjct: 428 GGPGGFGP----PPPGGPGAYGPPPTGFPPVGAP-PPGAAGAPGGNP 469
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = -2
Query: 587 PPXXGXKXXPPXGGGKXXPPPXXRGXGXFXGGXGXGPXKKXPXXXGGGGFFXXXKXXXPP 408
P G P GG PPP G G GP P GG G + PP
Sbjct: 394 PSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +1
Query: 445 PPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPP-XGGXFFXPXXGGXP 594
PPP GF P P P P P GG PPP GG P G P
Sbjct: 66 PPPVPNGFI--PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP 114
>U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical
protein ZK1127.9d protein.
Length = 220
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +3
Query: 447 PPXGXGXFFXGPXPLPPXKXPX--PPXXGG-GXGFSPPXXGXXFXPXXXGXXP 596
PP G G FF P P PP G G GF+ P F P G P
Sbjct: 43 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMPP 95
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +3
Query: 447 PPXGXGXFFXGPXPLPPXKXPX--PPXXGG-GXGFSPPXXGXXFXPXXXGXXP 596
PP G G FF P P PP G G GF+ P F P G P
Sbjct: 52 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMPP 104
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +3
Query: 447 PPXGXGXFFXGPXPLPPXKXPX--PPXXGG-GXGFSPPXXGXXFXPXXXGXXP 596
PP G G FF P P PP G G GF+ P F P G P
Sbjct: 43 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMPP 95
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 393 FXXXGGGXGXFXXXKKXPPPXGXGXFFXGPXPLPPXKXPXPPXXGGGXGFSPP 551
F GG G PPP G G LP P GGG G PP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPP 69
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +1
Query: 388 FFXPXXGGGXXXFXXXKXPPPPXXXGFFFXGPXPXPP-XKXPXPRXXGGGXXFPPP 552
F P GGG PPPP G G P P GGG PPP
Sbjct: 17 FLLPSGGGGGC--GCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPP 70
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 587 PPXXGXKXXPPXGGGKXXPPPXXRGXGXFXGGXGXGPXKKXPXXXGGGG 441
PP PP GG PPP R GG G P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 445 PPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPP + P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = +3
Query: 477 GPX-PLPPXKXPXPPXXGGGXGFSPP 551
GP P PP P P GGG G PP
Sbjct: 786 GPGAPPPPGMRPPPGAPGGGGGMYPP 811
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 587 PPXXGXKXXPPXGGGKXXPPPXXRGXGXFXGGXGXGPXKKXPXXXGGGG 441
PP PP GG PPP R GG G P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 445 PPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPP + P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = +3
Query: 477 GPX-PLPPXKXPXPPXXGGGXGFSPP 551
GP P PP P P GGG G PP
Sbjct: 786 GPGAPPPPGMRPPPGAPGGGGGMYPP 811
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 445 PPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPP + P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = +3
Query: 477 GPX-PLPPXKXPXPPXXGGGXGFSPP 551
GP P PP P P GGG G PP
Sbjct: 786 GPGAPPPPGMRPPPGAPGGGGGMYPP 811
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 481 PXPXPPXKXPXPRXXGGGXXFPPPXG 558
P P PP P P GG PPP G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLG 796
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 445 PPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPP + P P P P GG PP GG P G P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Frame = +3
Query: 477 GPX-PLPPXKXPXPPXXGGGXGFSPP 551
GP P PP P P GGG G PP
Sbjct: 786 GPGAPPPPGMRPPPGAPGGGGGMYPP 811
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 397 PXXGGGXXXFXXXKXPPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPP 552
P GG PPPP G G P PP P G G PPP
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP-PPQAGGSPPPAGTGSPPPPP 333
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 481 PXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
P P PP K P G G PPP G P G P
Sbjct: 237 PPPPPPPKGSPP-LAGSGSPPPPPAAGSPPPPRTGSPP 273
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 445 PPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPP G P P P PR PPP G P G P
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 397 PXXGGGXXXFXXXKXPPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPP 552
P GG PPPP G G P PP P G G PPP
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP-PPQAGGSPPPAGTGSPPPPP 354
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 481 PXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
P P PP K P G G PPP G P G P
Sbjct: 258 PPPPPPPKGSPP-LAGSGSPPPPPAAGSPPPPRTGSPP 294
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 445 PPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPP G P P P PR PPP G P G P
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +1
Query: 397 PXXGGGXXXFXXXKXPPPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPP 552
P GG PPPP G G P PP P G G PPP
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP-PPQAGGSPPPAGTGSPPPPP 339
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 481 PXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
P P PP K P G G PPP G P G P
Sbjct: 243 PPPPPPPKGSPP-LAGSGSPPPPPAAGSPPPPRTGSPP 279
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 445 PPPXXXGFFFXGPXPXPPXKXPXPRXXGGGXXFPPPXGGXFFXPXXGGXP 594
PPP G P P P PR PPP G P G P
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 481 PXPXPPXKXPXPRXXGGGXXFPPPXG 558
P P PP P P GG PPP G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLG 796
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 551 GGGKXXPPPXXRGXGXFXGGXGXGPXKKXPXXXGGGG 441
GGG PPP G G GG G G GGGG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGG--GGGCGGGGG 102
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 551 GGGKXXPPPXXRGXGXFXGGXGXGPXKKXPXXXGGGG 441
GGG PPP G G GG G G GGGG
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGG--GGGCGGGGG 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,588,555
Number of Sequences: 27780
Number of extensions: 166803
Number of successful extensions: 1008
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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