Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_J03
(951 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.58
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.1
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 3.1
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 23 4.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 5.4
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 23 5.4
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 5.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 5.4
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 9.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 9.4
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.8 bits (54), Expect = 0.58
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -2
Query: 485 SHVLSCVIPLILWITVLPPLSELIPLAA 402
S +LS V+ L+L +LPP S ++PL A
Sbjct: 270 SILLSLVVFLLLVSKILPPTSLVLPLIA 297
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.4 bits (48), Expect = 3.1
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 506 GLLLAFCSHVL-SCVIPLILWITVLPPLSELIPL 408
G ++ CS +L S + +L ++PP S IPL
Sbjct: 278 GEKVSLCSSILLSLTVFFLLLAEIIPPTSLAIPL 311
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.4 bits (48), Expect = 3.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 302 EKTSHTSTLNLKHKMNAIVVV 240
E T TLNLKH A++V+
Sbjct: 56 EDAEDTQTLNLKHLRAAVLVL 76
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 23.0 bits (47), Expect = 4.1
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = -2
Query: 722 PRSRREKGGQVSGKRQGRNRRAH 654
P++++ +G + + +NRRAH
Sbjct: 41 PKTKKSQGSRTTHNELEKNRRAH 63
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.6 bits (46), Expect = 5.4
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +1
Query: 622 DTRXFPLEAPSCALLFRPCR 681
+ R FP++ SC L+ C+
Sbjct: 165 ELRNFPMDRQSCPLILGSCK 184
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.6 bits (46), Expect = 5.4
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 478 TCEQKASKRPGTVKRPR--CWRXSIGSAPLTSITKIDAQVRGGETRQDYKDTR 630
T +R V +PR WR +I S ++ G + +D+K TR
Sbjct: 382 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTR 434
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 22.6 bits (46), Expect = 5.4
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 478 TCEQKASKRPGTVKRPR--CWRXSIGSAPLTSITKIDAQVRGGETRQDYKDTR 630
T +R V +PR WR +I S ++ G + +D+K TR
Sbjct: 297 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTR 349
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.6 bits (46), Expect = 5.4
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 478 TCEQKASKRPGTVKRPR--CWRXSIGSAPLTSITKIDAQVRGGETRQDYKDTR 630
T +R V +PR WR +I S ++ G + +D+K TR
Sbjct: 616 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTR 668
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 9.4
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -2
Query: 485 SHVLSCVIPLILWITVLPPLSELIPL 408
S +LS + +L ++PP S ++PL
Sbjct: 277 SILLSLTVFFLLLAEIIPPTSLVVPL 302
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 9.4
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -2
Query: 302 EKTSHTSTLNLKHKM 258
++ H+STL++ HKM
Sbjct: 238 DENRHSSTLDIDHKM 252
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,901
Number of Sequences: 438
Number of extensions: 4320
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31202262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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