Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_J02
         (923 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK123603-1|BAC85658.1|  143|Homo sapiens protein ( Homo sapiens ...    35   0.48 
AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens ...    34   0.84 
AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane hel...    34   0.84 
AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens ...    32   2.6  
AK055900-1|BAB71040.1|  181|Homo sapiens protein ( Homo sapiens ...    32   2.6  
AK094875-1|BAC04446.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.9  
AK123032-1|BAC85519.1|  274|Homo sapiens  factor.  protein.            31   7.8  
AK091954-1|BAC03776.1|  174|Homo sapiens protein ( Homo sapiens ...    31   7.8  

>AK123603-1|BAC85658.1|  143|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41609 fis, clone CTONG3001560. ).
          Length = 143

 Score = 34.7 bits (76), Expect = 0.48
 Identities = 13/54 (24%), Positives = 27/54 (50%)
 Frame = -3

Query: 201 KICTNKTVNKIKMLNFIFVSLVCHSACICARICV*YNLCACATGCVCASDIKIL 40
           ++C    V  +   +   V++     C+CA +C+   +C CA  CV +  +++L
Sbjct: 25  RMCVTVCVRALVRAHVCLVTVCLRLFCVCAHMCLVPCVCVCAWACVFSCCVRVL 78


>AK022609-1|BAB14128.1|  307|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12547 fis, clone NT2RM4000634. ).
          Length = 307

 Score = 33.9 bits (74), Expect = 0.84
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 138 VCHSACICARICV*YNLCACATGCVC 61
           VC  A +C R+CV  ++C CA  C C
Sbjct: 82  VCGGAHLCVRLCVGVHICVCACVCGC 107



 Score = 33.5 bits (73), Expect = 1.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -3

Query: 138 VCHSACICARICV*YNLCACATGCVC 61
           VC   C C  +CV   +CAC  GC+C
Sbjct: 31  VCVRLCGCTFVCVCACVCACVCGCLC 56



 Score = 32.7 bits (71), Expect = 1.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 123 CICARICV*YNLCACATGCVCAS 55
           C+C  +CV  ++C C   CVC +
Sbjct: 240 CVCVCLCVWVHICVCVCACVCVA 262



 Score = 30.7 bits (66), Expect = 7.8
 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -3

Query: 138 VCHSA--CICARICV*YNLCACATGCVCA 58
           VC  A  C+   ICV   LC C   CVCA
Sbjct: 17  VCVGAHLCVWVHICVCVRLCGCTFVCVCA 45



 Score = 30.7 bits (66), Expect = 7.8
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -3

Query: 144 SLVCHSACI--CARICV*YNLCACATGCVCA 58
           + VC  AC+  C  +CV   +C C   CVCA
Sbjct: 153 TFVCVCACVWGCTFVCVCACVCGCTFVCVCA 183


>AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 346

 Score = 33.9 bits (74), Expect = 0.84
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 138 VCHSACICARICV*YNLCACATGCVC 61
           +C S C+C  +CV   +C C   CVC
Sbjct: 33  ICVSVCVCICVCVSVFVCVCICVCVC 58



 Score = 31.5 bits (68), Expect = 4.5
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 153 IFVSL-VCHSACICARICV*YNLCACATGCVCAS 55
           +FV + +C   C+C  +CV  ++C     CVC S
Sbjct: 47  VFVCVCICVCVCVCVSMCVSISVCVYLCLCVCVS 80


>AK128797-1|BAC87611.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45585 fis, clone BRTHA3013882. ).
          Length = 201

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -3

Query: 153 IFVSLVCHSACICARICV*YNLCACATGCVCASDIKI 43
           + V ++C S C+C  +CV   +C C   C+C   + +
Sbjct: 16  VCVCVLCVSVCVCVCLCV--CVCVCVCLCLCVLSVSV 50



 Score = 31.5 bits (68), Expect = 4.5
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -3

Query: 213 LLTNKICTNKTVNKIKMLNFIFVSL-VCHSACICARICV*YNLCACATGCVC 61
           +L+  +C    V+    +  + V L VC   C+   +CV  +LC C  G VC
Sbjct: 45  VLSVSVCLCVCVSVCLCVCLVSVCLCVCLCVCVSVCLCVCLHLCVCVCGFVC 96



 Score = 31.1 bits (67), Expect = 5.9
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 138 VCHSACICARICV*YNLCACATGCVC 61
           VC   C+C  +CV   +C C   CVC
Sbjct: 91  VCGFVCLCLCVCVCLCVCVCLHLCVC 116



 Score = 30.7 bits (66), Expect = 7.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 138 VCHSACICARICV*YNLCACATGCVC 61
           +C   CIC  +CV   +C C   C+C
Sbjct: 133 LCVCVCICVFVCVWVCVCLCVCVCLC 158


>AK055900-1|BAB71040.1|  181|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31338 fis, clone MAMGL1000184. ).
          Length = 181

 Score = 32.3 bits (70), Expect = 2.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 147 VSLVCHSACICARICV*YNLCACATGCVCA 58
           V  +C   C+C  +C    +C C   C+CA
Sbjct: 126 VVCMCACMCVCVHVCACVYVCMCVLVCMCA 155


>AK094875-1|BAC04446.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ37556 fis, clone BRCAN2028545. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = -3

Query: 135 CHSACI--CARICV*YNLCACATGCVCAS 55
           C  AC+  C R+C    +C C   C+CAS
Sbjct: 100 CKCACVYVCKRVCTCACVCMCVQVCMCAS 128



 Score = 31.1 bits (67), Expect = 5.9
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -3

Query: 138 VCHSACICARICV*YNLCACAT--GCVCASDIKILR 37
           VC   C CA +C+   +C CA+   C+    ++++R
Sbjct: 107 VCKRVCTCACVCMCVQVCMCASVHMCIVCVSVRVVR 142


>AK123032-1|BAC85519.1|  274|Homo sapiens  factor.  protein.
          Length = 274

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -3

Query: 147 VSL-VCHSACICAR--ICV*YNLCACATGCVCA 58
           VSL VC  AC+C    IC+   +C C   CVCA
Sbjct: 12  VSLCVCVCACVCVHVGICMHACVCLCMCMCVCA 44


>AK091954-1|BAC03776.1|  174|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34635 fis, clone KIDNE2016096. ).
          Length = 174

 Score = 30.7 bits (66), Expect = 7.8
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 138 VCHSAC-ICARICV*YNLCACATGCVC 61
           VC   C +C+ +C+   +C CA  CVC
Sbjct: 18  VCVYVCDVCSCVCIFRQVCICACQCVC 44


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,527,375
Number of Sequences: 237096
Number of extensions: 1644958
Number of successful extensions: 7218
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7080
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)