Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_I22
(881 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 35 0.018
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 34 0.023
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 34 0.031
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 33 0.041
SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion transporter|... 33 0.054
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 33 0.071
SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces ... 32 0.094
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 32 0.094
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.12
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 32 0.12
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.12
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 32 0.12
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 31 0.16
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 0.22
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 31 0.29
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 31 0.29
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 30 0.38
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 30 0.50
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.50
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 30 0.50
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 29 0.66
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 29 0.66
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 29 0.66
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.66
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 0.88
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.5
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 28 2.0
SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9 |Schizos... 27 2.7
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 27 2.7
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 27 2.7
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 27 3.5
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 27 4.7
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 27 4.7
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 27 4.7
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 26 6.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 6.2
SPAC4F8.02c |mrpl40|SPAC644.02|mitochondrial ribosomal protein s... 26 8.2
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 26 8.2
SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces pom... 26 8.2
SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 8.2
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 34.7 bits (76), Expect = 0.018
Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Frame = +3
Query: 48 WNEIENL-VSSVENSSRPPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSH 224
WN I VSSV +S P QPT+ + +P P + + K + E T ++
Sbjct: 522 WNRIAKTPVSSVPSS---PVQPTSYNRTLPPM---PEVVAYKGDEESPRVSRNTSLARRK 575
Query: 225 GPPDSINTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPV 404
PD+ + +P SP + IK PS S R + L S P + S SP
Sbjct: 576 PLPDT-ESHSP--SPSATSSIKKNPSSIFRRFSSRRKQNKSSTSTLQI-SAPLETSQSPP 631
Query: 405 QPHTPVSH 428
P T SH
Sbjct: 632 TPRTKPSH 639
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 34.3 bits (75), Expect = 0.023
Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 3/149 (2%)
Frame = +3
Query: 66 LVSSVENSSRPPSQPTNESTNMPSGFLGPRIESIKKEP--EFLHQPHITPVSTSHGPPDS 239
L +S E S S + S+ +PS SI P L P S+S S
Sbjct: 497 LSTSSEVVSEVSSTLLSGSSAIPSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSS 556
Query: 240 INTITP-VKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPHT 416
I TI+ + S P+ S S + S ST+ S TS + ++SP +
Sbjct: 557 ITTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISS 616
Query: 417 PVSHSXLNLMNPTPISIAATIPGPVMHSG 503
+S S L +PTP + + I + SG
Sbjct: 617 SISSSSTILSSPTPSTSSLMISSSSIISG 645
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 33.9 bits (74), Expect = 0.031
Identities = 37/144 (25%), Positives = 58/144 (40%), Gaps = 18/144 (12%)
Frame = +3
Query: 81 ENSSRPPSQPTNESTNMPSGFLG--------PRIESIKKEPEFLHQPHITPVSTSHGPP- 233
ENS PS+ ST+ + G P + + K E L P + T PP
Sbjct: 299 ENSGHLPSKSHFSSTDSNTDSFGLESDERSLPSVSNDLKSSETLKNPRNDDLLTLQQPPR 358
Query: 234 --DSINTITPVKSP-HTPTPI-----KSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQI 389
S + P +SP P P S+ S+N +P G + T+P +L PS P +
Sbjct: 359 YPHSQMVMLPARSPVEVPAPTFDRRNVSRNSNNNSPEGYDNNRTNPTVNNL--PSYPTNL 416
Query: 390 S-ASPVQPHTPVSHSXLNLMNPTP 458
+ ++P H + ++P P
Sbjct: 417 ARPKAIKPMPTSIHGQTSPLSPIP 440
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 33.5 bits (73), Expect = 0.041
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 10/141 (7%)
Frame = +3
Query: 99 PSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPP---DSINTIT----- 254
PS S++ P G I + + + PH PV+++ P S+++I
Sbjct: 82 PSLSPMTSSHFPYASDGTLISATNHCDDCSYNPHYLPVNSNGSSPSHTSSLDSIPGYASG 141
Query: 255 --PVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPHTPVSH 428
P K+P+ P + S + GS +S +S+ S S+ P+ +P S
Sbjct: 142 SGPFKTPYRPVAVSESSSRSSFSMGSSEFASSTWSQSPMQSSLYVSPSSQPLDRFSPASF 201
Query: 429 SXLNLMNPTPISIAATIPGPV 491
+ T S+++++P V
Sbjct: 202 PSKETL--TSSSLSSSVPRSV 220
>SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 33.1 bits (72), Expect = 0.054
Identities = 24/102 (23%), Positives = 41/102 (40%)
Frame = +3
Query: 108 PTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPTPI 287
P+N S ++P+GF + ++ P F + H + S P D ++ P ++ +
Sbjct: 2 PSNTSRSVPTGFYYKQNARMQNRPRFSDRKH-SSKSKHRFPVDP--SLQPDEADEGTRLL 58
Query: 288 KSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPH 413
+ S P H S PS P + +SP PH
Sbjct: 59 GNSDSDLLEPPSEHSSNGEDDKDINNPPSMPSSVCSSPKSPH 100
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 32.7 bits (71), Expect = 0.071
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 210 VSTSHGPPDSINTITPVKSPHTPT-PIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQ 386
V H DS N+ SPH P PS + H H S++S ++ TSP+ P
Sbjct: 83 VLQKHQQEDSGNSSQSPTSPHPSNQPAMLSPSTAASQHHHHHSSSSSYAVSPTSPTSP-- 140
Query: 387 ISASPV 404
S+ P+
Sbjct: 141 TSSGPI 146
>SPAC222.09 |seb1||RNA-binding protein Seb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 32.3 bits (70), Expect = 0.094
Identities = 34/133 (25%), Positives = 59/133 (44%)
Frame = +3
Query: 90 SRPPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSP 269
S P QP+N ++PSG +G + S+ + + + +++ + PP I++I P
Sbjct: 256 SNPLFQPSNVPQSIPSGPMGMKTGSV-NDTQSQQITLMNVLASQNVPPAQIDSIMKAAFP 314
Query: 270 HTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPHTPVSHSXLNLMN 449
+ P QP+ G + TS S L S + R S +P S S L++
Sbjct: 315 NYNAPF--QPA--GVGSVPLPAPTSSQSLRLGSLHRSRSPSPRSGRPRRSPSPSHLSI-- 368
Query: 450 PTPISIAATIPGP 488
P+ + A +P P
Sbjct: 369 PSTLPPADGVPKP 381
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 32.3 bits (70), Expect = 0.094
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = +3
Query: 195 PHITPVSTSHGPPDSINTITPVKSPHTPTPIKSQP--SHNGTPHGSHRSTTSPFSRHLTS 368
P + P S+S P + N T P+T TP+ S P + N T S T++P + ++
Sbjct: 411 PTVPPTSSST-PLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVT---ST 466
Query: 369 PSQPRQISASPVQPH--TPVSHSXLNLMNPTPISIAATIPGPVMHSGQLVT 515
P + S P+ TPV+ + L N T + PV S ++
Sbjct: 467 PLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTIS 517
Score = 30.7 bits (66), Expect = 0.29
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 204 TPVSTSHGPPDSINTITPVKSPHTPTPIKSQP--SHNGTPHGSHRSTTSPFSRHLTSPSQ 377
TPV+++ P + N T P+T TP+ S P + N T S T++P + + S
Sbjct: 461 TPVTST--PLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISS 518
Query: 378 PRQISASPVQPHTPVSHSXLNLMNPTPIS 464
++++PV T + S L TP++
Sbjct: 519 STPVTSTPVTT-TNCTTSTSVLYTSTPVT 546
Score = 29.5 bits (63), Expect = 0.66
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Frame = +3
Query: 204 TPVSTSHGPPDSINTITPVKS--PHTPTPIKSQP------SHNGTPHGSHRSTTSPFSRH 359
T +TS P + N+ TPV P T T S P S GT ST++ +
Sbjct: 283 TSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTS 342
Query: 360 LTSPSQPRQISASPVQPHTPVSHSXLNLMNPTPISIAAT 476
+ P P S +PV P P + + P P S ++T
Sbjct: 343 TSIP--PTGNSTTPVTPTVPPTSTSSTSTPPPPASTSST 379
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/77 (27%), Positives = 31/77 (40%)
Frame = +3
Query: 246 TITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPHTPVS 425
T+ P + T PI + + + S TTS TS P S +PV P P +
Sbjct: 250 TVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTS-IPPTGNSTTPVTPTVPPT 308
Query: 426 HSXLNLMNPTPISIAAT 476
+ P P S ++T
Sbjct: 309 STSSTSTPPPPASTSST 325
Score = 27.5 bits (58), Expect = 2.7
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +3
Query: 204 TPVSTSHGPPDSINTITPVKSPHTPTPIKSQP--SHNGTPHGSHRSTTSPFSRHLTSPSQ 377
TPV+++ P + N T +T TP+ S P + N T S T++P + + S
Sbjct: 520 TPVTST--PVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISS 577
Query: 378 PRQISASPVQPHTPVSHSXLNLMNPTPIS 464
++++PV T + S L TPI+
Sbjct: 578 STPVTSTPVTT-TNCTTSTSVLYTSTPIT 605
Score = 26.2 bits (55), Expect = 6.2
Identities = 22/87 (25%), Positives = 36/87 (41%)
Frame = +3
Query: 204 TPVSTSHGPPDSINTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPR 383
T V + P S N +P T TP+ + N T S T++P + ++ S
Sbjct: 559 TSVPYTSTPVTSSNYTISSSTPVTSTPVTTT---NCTTSTSVLYTSTPITSPNSTSSSST 615
Query: 384 QISASPVQPHTPVSHSXLNLMNPTPIS 464
Q+S + P T S S + P++
Sbjct: 616 QVSWNSTTPITGTSTSKVTSSTSIPLT 642
Score = 26.2 bits (55), Expect = 6.2
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +3
Query: 204 TPVSTSHGPPDS--INTITPVKSPHTPTPIKSQPSHNGTPHGSHRST---TSPFSRHLTS 368
TPV+T++ + + T TP+ SP++ + +Q S N T + ST TS S LTS
Sbjct: 584 TPVTTTNCTTSTSVLYTSTPITSPNSTSSSSTQVSWNSTTPITGTSTSKVTSSTSIPLTS 643
Query: 369 PSQ 377
++
Sbjct: 644 TNR 646
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.12
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 4/126 (3%)
Frame = +3
Query: 87 SSRPPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKS 266
+S P P + + + P + P + ++ +P S G S + ++ ++
Sbjct: 1363 TSPKPQIPDSSNVHAPPPPVQP-MNAMPSHNAVNARPSAPERRDSFGSVSSGSNVSSIED 1421
Query: 267 PHTPTPIK-SQPSHNGTPHGSHRSTTSPFSRHLTSPSQPR---QISASPVQPHTPVSHSX 434
+ P+K SQP++ G P P H +P QP+ ++ +P P +
Sbjct: 1422 ETSTMPLKASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAP 1481
Query: 435 LNLMNP 452
++ + P
Sbjct: 1482 VSQLPP 1487
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 31.9 bits (69), Expect = 0.12
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +3
Query: 264 SPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPS------QPRQISASPVQPHTPVS 425
SP+T I SQ + + + STT+PF L PS + +Q + P+QP+ PV
Sbjct: 491 SPNTALNI-SQVNMYAQNNPVNPSTTNPFQNFLRQPSYQGMQFEQQQPTTIPLQPNIPVL 549
Query: 426 HSXLNLMNPTPISIAATIPGP 488
+ +M P +P P
Sbjct: 550 NQQYPVMIPAMEDSRGPLPSP 570
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.12
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 195 PHITPVSTSHGPPDSINTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTT-SPFSRHLTSP 371
P + P ST+ P + PV P P PS + RS+ SP S SP
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSP 1267
Query: 372 SQPRQISASPVQPHTPVSHS 431
+ SA+P + T VS S
Sbjct: 1268 TSSSMASAAPAR--TSVSRS 1285
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 31.9 bits (69), Expect = 0.12
Identities = 41/153 (26%), Positives = 60/153 (39%), Gaps = 7/153 (4%)
Frame = +3
Query: 72 SSVENSSRPPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTI 251
SSV NSS P + T +T+ P S+ + + ST +N+
Sbjct: 3195 SSVLNSSTPITSSTTLNTSTPI-----TSSSVLNSSTAITSSSVLNSSTPITSSSVLNSS 3249
Query: 252 TPVKSP---HTPTPIKSQPSHN-GTPHGSHR--STTSPFSRHLTSPSQPRQISASPVQPH 413
TP+ S +T TPI S N TP S +T++P + S S++ +
Sbjct: 3250 TPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTS 3309
Query: 414 TPV-SHSXLNLMNPTPISIAATIPGPVMHSGQL 509
TP+ S S LN S A P+ S L
Sbjct: 3310 TPITSSSVLNSSTAITSSTALNTSTPITSSSVL 3342
Score = 29.5 bits (63), Expect = 0.66
Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 8/156 (5%)
Frame = +3
Query: 72 SSVENSSRPPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTI 251
SSV NSS P + T +T+ P S+ + + ST ++NT
Sbjct: 927 SSVLNSSTPITSSTGLNTSTPI-----TSSSVLNSSTPITSSTVLNSSTPITSSTALNTS 981
Query: 252 TPVKSP---HTPTPIKSQPSHN-GTPHGSH---RSTTSPFSRHLTSPSQPRQISASPVQP 410
TP+ S ++ TPI S N TP S S+T+ S + S P S+S +
Sbjct: 982 TPITSSSVLNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTP-ITSSSVLNS 1040
Query: 411 HTPV-SHSXLNLMNPTPISIAATIPGPVMHSGQLVT 515
TP+ S + +N P S P+ S L T
Sbjct: 1041 STPITSSTVVNTSTPITSSTVVNSSTPITSSTALNT 1076
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 31.5 bits (68), Expect = 0.16
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Frame = +3
Query: 27 IGNSLRFWNEIENLVSSVENSSRPPSQ--PTNESTNMPSGFLGPRIESIKKEPEFLHQPH 200
I N+ + +++ +L+ S+ S PS ++ S+ S + P + +P+ L P
Sbjct: 957 ISNTKQSFDKKSSLIDSIPALSPAPSSLARSSVSSQRSSTSIIPIKPNKPTKPDHLVAPR 1016
Query: 201 ITPV------STSHGPPDSINTITPVKSPHTPTPIKSQPS 302
+ P+ S+S G P +TPV P TP P KS S
Sbjct: 1017 VKPLLPPRSGSSSSGVPAP--NLTPVNVPPTPPPRKSSAS 1054
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +3
Query: 324 SHRSTTSPFSRHLTSPSQPRQISASPVQPHTP----VSHSXLNLMNPTPISIAATIP 482
S RS+TS P++P + A V+P P S S + N TP+++ T P
Sbjct: 991 SQRSSTSIIPIKPNKPTKPDHLVAPRVKPLLPPRSGSSSSGVPAPNLTPVNVPPTPP 1047
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 210 VSTSHGPPDSINTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPS 374
VS+ S+N+ PHT P+ ++P + T R TTS S TSP+
Sbjct: 192 VSSYSSKSQSVNSSVTSNPPHTEEPVAAKPEASSTATKGPRPTTSA-SNTNTSPA 245
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 30.7 bits (66), Expect = 0.29
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Frame = +3
Query: 93 RPPSQPTNESTN---MPSGFLGPRIESIKKEPEFLHQPHIT-PVSTSHGPPDSINTI-TP 257
+PP QP + + SG P + + + P + P++ G P +I + P
Sbjct: 190 QPPQQPLQQQQQQRQLHSGIQQPVSTIVSQNGTYYSIPAVNHPMA---GQPIAIAPVPAP 246
Query: 258 VKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPHTP 419
++ P P ++ P+ NGTP+ T P + +QP +++SP P
Sbjct: 247 NQAALPPIPPQALPA-NGTPNTLASPVTLPAANSAVQNAQPVPMTSSPAMAVVP 299
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 30.7 bits (66), Expect = 0.29
Identities = 26/98 (26%), Positives = 42/98 (42%)
Frame = +3
Query: 186 LHQPHITPVSTSHGPPDSINTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLT 365
L +P + +SH P S + T + S + + P P+ T SP
Sbjct: 171 LPRPPLPSSVSSHSSPYSTTSSTSLYSLYNDISLSCSPE----PYLPLSPTRSP----AR 222
Query: 366 SPSQPRQISASPVQPHTPVSHSXLNLMNPTPISIAATI 479
+PS R S+ ++P +P+S S L P P S+ + I
Sbjct: 223 TPSPIRLYSSDALRPQSPLSPSVEYLTPPNPYSLKSDI 260
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 30.3 bits (65), Expect = 0.38
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 306 NGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPHTPVSHSXLNLMNPTPISIAAT 476
N + GS+ + S FS T PS S+ P+QP P S S +++ NP +S ++
Sbjct: 170 NSSTFGSNPN--SVFSAQPTEPSVEPPTSSFPIQPPLPPSRS-ISISNPQSLSFPSS 223
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 29.9 bits (64), Expect = 0.50
Identities = 25/107 (23%), Positives = 38/107 (35%)
Frame = +3
Query: 60 ENLVSSVENSSRPPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDS 239
+ L S S P+ S PS + S K TP+S++ PP
Sbjct: 511 QGLPSPATTDSNTHMLPSQGSLLPPSSISETKSFSTKASTPLSTDDIATPLSSAPNPPSV 570
Query: 240 INTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQP 380
+ T S H+ S S++ + H + SP R T + P
Sbjct: 571 MPTYARKTSSHSER--SSHSSYHNSSHVPTAAFNSPIMRTSTKSTSP 615
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.9 bits (64), Expect = 0.50
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 207 PVSTSHGPPDSINTITPVKSPHTPTPIKSQPSH-NGTPHGSHRSTTSPFSRHLTSPSQPR 383
P S PP T P + T P QPSH N + +S + SR +SP+ P
Sbjct: 921 PAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMP- 979
Query: 384 QISASPVQPHTPVS 425
P P+TP++
Sbjct: 980 -----PSNPYTPIA 988
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 29.9 bits (64), Expect = 0.50
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 279 TPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPHTPVSHSXLNLMNPTP 458
+P ++Q PHG + +TSP + PS P + PHT S + ++P
Sbjct: 47 SPERAQKEPVSIPHGRYTWSTSPDTDSSHLPSTPPTVDIPFHHPHTIHSPTFTLSVSPDS 106
Query: 459 ISIAAT 476
S +AT
Sbjct: 107 QSSSAT 112
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 29.5 bits (63), Expect = 0.66
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Frame = +3
Query: 234 DSINTITPVKSPHTPTPIKSQPSH----NGT-----PHGSHRSTTSPFSRHLTSPSQPRQ 386
DS++ VK T I++ P++ NG+ PH RS +S + TSP +
Sbjct: 188 DSLSKKASVKDFSDVTGIETIPAYVEATNGSSTVRSPHAK-RSLSSISVKSSTSPFSGSK 246
Query: 387 ISASPVQPHTPVSHSXLNLMNP 452
+S PHTP +H N ++P
Sbjct: 247 FLSSSSYPHTPEAHLNSNHISP 268
Score = 25.8 bits (54), Expect = 8.2
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 12/101 (11%)
Frame = +3
Query: 150 PRIESIKKEPEFLHQPHITPVSTSHGPPDSINTIT-------PVKSPHTPTPIKSQPSHN 308
P S+ +P L++ + S S P S+NT T P KSP PT + S S
Sbjct: 283 PESMSLGLKPPILNRSY----SASMAPGFSMNTFTATGNLGRPTKSPSVPTSVGSNKSRK 338
Query: 309 GTPHGSHRSTTSPFSRHLTSP-----SQPRQISASPVQPHT 416
T +P S P S P IS+ P T
Sbjct: 339 FPGINGSTLTATPSSLENLYPLSSRRSVPNLISSLGTSPST 379
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 29.5 bits (63), Expect = 0.66
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = +3
Query: 231 PDSINTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQP 410
P S N + + TP+ PS+ + + TTSP ++P P P +P
Sbjct: 194 PSSPNPAEHMTGAYVNTPLNQPPSYAASTQPEFQQTTSPIFSSSSTPPPP------PPRP 247
Query: 411 HTPVSHSXLNLMNPTPIS 464
P S N P S
Sbjct: 248 SQPTSGESQNTNPRFPFS 265
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 29.5 bits (63), Expect = 0.66
Identities = 28/116 (24%), Positives = 43/116 (37%), Gaps = 9/116 (7%)
Frame = +3
Query: 54 EIENLVSSVENSSRPPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPP 233
+IE +V +++ + S + T +PS F ++ P L + P S S P
Sbjct: 345 DIEGIVGTMQRQRQSVS---SYDTIVPSQFYKQKVVQ-NSPPSLLSTDNKIPESGSDHPS 400
Query: 234 DSINTI---------TPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPS 374
N+ T +P P P + P N PH S T P + PS
Sbjct: 401 SQDNSSKASLVENSQTQSSTPRKPLPTTTSPKVNPEPHSESISDTRPSTPRKVPPS 456
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.5 bits (63), Expect = 0.66
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 228 PPDSINTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQ 407
PP S P+ TP PI H GTP + + F+ + S ++P + A+
Sbjct: 646 PPPSGQVNAPMSQ--TPNPISFAYQH-GTPLATPTMRANSFNSYPASSAEPIRRPATTTV 702
Query: 408 PHTPVSHS 431
HTP +S
Sbjct: 703 GHTPNLYS 710
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.1 bits (62), Expect = 0.88
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +3
Query: 198 HITPVSTSHGPPDSINTI--TPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSP 371
++ P+S + PP +N + P S +P + S P+ T + S+T F+++
Sbjct: 256 NLMPLSNAPSPPKQMNVVGSLPSSSNTSPNHLASVPNRGLTSN----SSTGSFTKYTNGS 311
Query: 372 SQPRQISASPVQPHTP-VSHSXLNLMNPTPISIAATIP 482
S ++S P+ P S+S +L + + A P
Sbjct: 312 SNSLYSNSSMQTPYLPSKSNSSTSLHSMYGVGTTAYAP 349
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 1.5
Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Frame = +3
Query: 69 VSSVENSSRP--PSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSI 242
+SS +SS P S T +T+ + + + P P TP+S+++ +
Sbjct: 245 ISSTVSSSTPLTSSNSTTAATSASATSSSAQYNTSSLLPS--STPSSTPLSSANSTTATS 302
Query: 243 NTITPVKSPHTPTPIKSQPSHNGTPHGSHRST-TSPFSRHLTSPSQPRQISASPVQPHTP 419
+ TP+ S ++ T + + + ++ +T TS S L+S + SAS P T
Sbjct: 303 ASSTPLTSVNSTTTTSASSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASST-PLTS 361
Query: 420 VSHSXLNLMNPTPIS 464
V+ + + TP++
Sbjct: 362 VNSTTATSASSTPLT 376
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 18 DLTIGNSLRFWNEIENLVSSVENSSRPPSQPTNESTNMPSGFL 146
D+ + FW + L+ E S RP NE+ +PS FL
Sbjct: 499 DILFQDDRGFWQAVSTLI---EKSKRPVVMTCNETDFLPSAFL 538
>SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 532
Score = 27.5 bits (58), Expect = 2.7
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
Frame = +3
Query: 297 PSHNGTPHGSHRSTT-SP------FSRHLTSPSQ-----PRQISASPVQPHTPVSHSXLN 440
PS + HRS T SP F +TSPS P+ S + P P+S S
Sbjct: 285 PSRTSSFSSKHRSVTFSPPDLAILFDPSITSPSSSVGQIPQPTDHSALSPSKPMSISGTE 344
Query: 441 LMNPTPISI 467
NP P S+
Sbjct: 345 SPNPDPASL 353
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Frame = +3
Query: 285 IKSQPSHNGTPHGSHRSTTSPFSRHLTS-----PSQPRQISASPVQPHTPVSHSXLNL 443
I QPSH+ P S S++S S+H T PS ++ P P S NL
Sbjct: 122 IPQQPSHSQNPSSSSSSSSSQSSQHSTHLQFQIPSNEKKSLDDPSPRRKPSFFSKSNL 179
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 27.5 bits (58), Expect = 2.7
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +3
Query: 150 PRIESIKKEPEFLHQPHITPVSTSHGP-PDSINTITPVKSPHTPTPIKSQP---SHNGTP 317
P+++ I+ ++T +T+ G +S+NT V P + K +P S + +
Sbjct: 208 PQLKQIQVSDLEASFQNVTSRTTTGGHISNSLNT-QEVVLPSFSSNAKPKPHLSSKSSSQ 266
Query: 318 HGSHRSTTSPFSRHLTSPSQPRQISASPVQPHTPVSHSXLNLMNPTPISIAATIPGPVMH 497
+ + +TS FS SQP SASP + + N++ TP+ + + + P H
Sbjct: 267 GNTLQRSTSSFSTPNRKVSQPSDFSASPSR---SIVSPAKNIVGSTPVDVLSKLT-PEFH 322
Query: 498 S 500
+
Sbjct: 323 T 323
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 27.1 bits (57), Expect = 3.5
Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = +3
Query: 219 SHGPPDSINTITPVKSPHTPTP-IKSQPSHNGTPHGSHRSTTSP--FSRHLTSPSQPRQI 389
SH P + P P P S S P SH + P S+H QPR
Sbjct: 45 SHAPMYGLGQRRPSFLPGVSVPDTLSVRSGFSIPSSSHHPSAVPSLLSQHRLQQPQPRLY 104
Query: 390 SASPVQPHTPVSHSXLNLMNPTP 458
++P+ + P S + P P
Sbjct: 105 PSAPLNYYWPSYQSVPSAAPPPP 127
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 276 PTPIKSQPSHNGTPHGSHRSTTSP 347
P PI S ++N T H ST++P
Sbjct: 167 PQPISSSSTYNSTTSSYHNSTSTP 190
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 26.6 bits (56), Expect = 4.7
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Frame = +3
Query: 282 PIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPHTPVSHSXLNLMNPTPI 461
P S P+ + P S + + F +SP +I+ +P S + +P +
Sbjct: 204 PETSGPASSVLPSSSQLESFNEFMFLPSSPPGLDEINGAPSFEELNFQISQPSPAHPVDL 263
Query: 462 SIAATIPG--PVMHSGQLVTHLHIRLRHSXXPPHPCFIIPQYFNYLQQQRHT 611
S T P PV QLV +L + P P F + F++L RHT
Sbjct: 264 SSPETAPNISPVSPFAQLV-----KLEPTS-PQKPSFALDSSFSHLDVCRHT 309
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 26.6 bits (56), Expect = 4.7
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Frame = +3
Query: 108 PTNESTNMPSGFLGP-RIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPTP 284
P++ S+ +PS L S+ K PE + P S SIN + V + TP
Sbjct: 550 PSSISSRLPSSNLEQGSSSSVTKSPESMPDPSAKASSPVTSKGVSINEKSAVNNYATPLS 609
Query: 285 IKSQPSH-NGTPHGSHRSTTSPFSRHLTSPSQPRQISASP 401
K QP G+ G+ SP + SP ++ P
Sbjct: 610 -KPQPKDTKGSKLGNTFVAPSPAASLPASPPVGTELKTRP 648
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 18 DLTIGNSLRFWNEIENLVSSVENSSRPPSQPTNESTNMPSGF--LGPRIESIKKEPEFLH 191
D+ + +SL+ ++ + ++S+ S P T S + LG I + ++ P FL+
Sbjct: 1207 DIRMNHSLQTFSTDNSGLTSLTVHSHAPVYATGSSNQSIKIWDTLGQNINTFRENPRFLN 1266
Query: 192 QP 197
QP
Sbjct: 1267 QP 1268
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 6.2
Identities = 28/107 (26%), Positives = 41/107 (38%), Gaps = 5/107 (4%)
Frame = +3
Query: 195 PHITPVSTSHGPPDSINTITPVKSPHTPTPIKSQPSHNGTP----HGSHRSTTSPFSRHL 362
P +TP + PP S++ + P P+ S PS GT +G++ S S L
Sbjct: 35 PRLTP---NLPPPFSVHQLQSFVPPQPPS--SSSPSTTGTVAVPINGANAVYPSTNSVSL 89
Query: 363 TSPSQPRQISASPVQ-PHTPVSHSXLNLMNPTPISIAATIPGPVMHS 500
P + V PH SH + +PT + P HS
Sbjct: 90 PQSYDPWLDANGVVPLPHDVASHPSYMVQSPTSYHACSNNQSPFPHS 136
>SPAC4F8.02c |mrpl40|SPAC644.02|mitochondrial ribosomal protein
subunit L40|Schizosaccharomyces pombe|chr 1|||Manual
Length = 279
Score = 25.8 bits (54), Expect = 8.2
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +3
Query: 96 PPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHT 275
P + STN+ S + P IE ++ +H P P ++T PV S T
Sbjct: 155 PVKLKKHSSTNLRS-IIRPNIEGVQIHT--IHLPRPKTEDKPKDPEGKLDTKNPVVSKVT 211
Query: 276 PTPIKSQP 299
+P S+P
Sbjct: 212 WSPSLSEP 219
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/73 (19%), Positives = 32/73 (43%)
Frame = +3
Query: 228 PPDSINTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQ 407
PP+ I TP P S + +G + + + F + + S + +P++
Sbjct: 151 PPNQIGINAHPAVRQTPQPAPSPNTPSGNANQLTPAYAASFDKFMVSLISFMEKRGTPIK 210
Query: 408 PHTPVSHSXLNLM 446
+ ++++ +NLM
Sbjct: 211 SYPQINNTPINLM 223
>SPAC24B11.07c |||ketopantoate reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 25.8 bits (54), Expect = 8.2
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 159 ESIKKEPEFLHQPHITPVSTSHGPP--DSINTITPVKSPHTPTPIKSQPSHNGTPHGSHR 332
+S+K + E L + + PP N ++P HT I + S GTP +
Sbjct: 422 QSLKSDYEGLGRTFDPRFAPRGSPPVRGGKNVLSPEAKEHTHKNISPESSRFGTPSDPNS 481
Query: 333 STTSPFSRHLTSPS 374
S+ S + L+ P+
Sbjct: 482 SSQSLGNEVLSRPN 495
>SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 682
Score = 25.8 bits (54), Expect = 8.2
Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 14/109 (12%)
Frame = +3
Query: 96 PPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITP-VSTSHGPPDSINTITPVKSPH 272
PP + + ++P + + P++ P +ST PD + TI+ S H
Sbjct: 120 PPDSHDSPNNSIPLMANSCLLSADNSSSSTTSNPNVAPPISTL---PDPVATISSSSSSH 176
Query: 273 T------PTPIKSQPSHNGT-------PHGSHRSTTSPFSRHLTSPSQP 380
P S P H G H +H S T P S + + PS P
Sbjct: 177 LDMGAIHPPHHSSLPPHMGVDPSTMADAHNAHSSLTPPQSGYSSMPSLP 225
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,199,334
Number of Sequences: 5004
Number of extensions: 65610
Number of successful extensions: 338
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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