Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_I22
(881 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 28 0.099
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 28 0.099
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 24 1.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.8
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.7
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 4.9
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 23 4.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 4.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 4.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 23 4.9
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 6.5
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 6.5
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 6.5
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 28.3 bits (60), Expect = 0.099
Identities = 17/63 (26%), Positives = 23/63 (36%)
Frame = +3
Query: 240 INTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPHTP 419
+N + PH T + TPH H +P +H T P A+ HTP
Sbjct: 405 LNNVYSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQHST-PLAHSSYPAAIQIGHTP 463
Query: 420 VSH 428
H
Sbjct: 464 HHH 466
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 28.3 bits (60), Expect = 0.099
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Frame = +3
Query: 69 VSSVENSSRPPSQPTNESTNMPSGFLGPRIE-SIKKEPEFL-HQPHITPV---STSHGP- 230
VS VE+S+ S NE N+ L R+ + +P H H++ S H P
Sbjct: 250 VSDVESST---SSGGNEDANL---LLKARLNPNSSLQPSLASHHSHLSSALGRSACHSPG 303
Query: 231 --PDSINTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTT 341
P + + P PH P + P +PH H + T
Sbjct: 304 VYPSTAGFLPPSYHPHQHHPSQYHPHRGSSPHHQHGNHT 342
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 24.2 bits (50), Expect = 1.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 270 HTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQPH 413
++P+P S P H+G+ ++TSP +R T+ S +SA+ H
Sbjct: 60 NSPSPTGSSPQHSGS-----SASTSPAAR--TTSSMYPYVSAAAAHHH 100
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.4 bits (48), Expect = 2.8
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 66 LVSSVENSSRPPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITP 209
L S E+S P +PT + + + +KEP +L H+TP
Sbjct: 963 LYKSSESSCNPDQKPTEY---LLEDSMKQQYGKRRKEPPWLEGVHVTP 1007
Score = 23.0 bits (47), Expect = 3.7
Identities = 20/86 (23%), Positives = 31/86 (36%)
Frame = +3
Query: 72 SSVENSSRPPSQPTNESTNMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTI 251
+S EN+S S + + + L E ++K H+ + + S DS
Sbjct: 620 ASRENTSNTTSMESFKPPTLTESLLNRHNEDMEKLMMLKHREFRSSIKASDKLKDSRIKT 679
Query: 252 TPVKSPHTPTPIKSQPSHNGTPHGSH 329
T S T + SH GSH
Sbjct: 680 TEKLSTDPNTHFQVNQSHGIKRSGSH 705
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 2.8
Identities = 13/61 (21%), Positives = 23/61 (37%)
Frame = +3
Query: 195 PHITPVSTSHGPPDSINTITPVKSPHTPTPIKSQPSHNGTPHGSHRSTTSPFSRHLTSPS 374
PH +P + G P + + P P P ++ +P +H+ SP+
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPASGIHQMQQLLQQHILSPT 86
Query: 375 Q 377
Q
Sbjct: 87 Q 87
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.7
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 126 NMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPT 281
N PS +GP + ++ P F H TP PP++ P+ PT
Sbjct: 131 NFPSRPMGPWVPMQEQIPRFRHIGPSTPF-PQFIPPNAYKFRPPLNPRFGPT 181
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 126 NMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPT 281
N PS +GP + ++ P F H TP PP++ P+ PT
Sbjct: 131 NFPSRPMGPWVPMQEQIPRFRHIGPSTPF-PRFIPPNAYKFRPPLNPRFGPT 181
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 126 NMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPT 281
N PS +GP + ++ P F H TP PP++ P+ PT
Sbjct: 131 NFPSRPMGPWVPMQEQIPRFRHIGPSTPF-PRFIPPNAYKFRPPLNPRFGPT 181
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 126 NMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPT 281
N PS +GP + ++ P F H TP PP++ P+ PT
Sbjct: 131 NFPSRPMGPWVPMQEQIPRFRHIGPSTPF-PRFIPPNAYKFRPPLNPRFGPT 181
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 126 NMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPT 281
N PS +GP + ++ P F H TP PP++ P+ PT
Sbjct: 131 NFPSRPMGPWVPMQEQIPRFRHIGPSTPF-PRFIPPNAYKFRPPLNPRFGPT 181
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 126 NMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPT 281
N PS +GP + ++ P F H TP PP++ P+ PT
Sbjct: 131 NFPSRPMGPWVPMQEQIPRFRHIGPSTPF-PRFIPPNAYKFRPPLNPRFGPT 181
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 4.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 126 NMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPT 281
N PS +GP + ++ P F H TP PP++ P+ PT
Sbjct: 131 NFPSRPMGPWVPMQEQIPRFRHIGPSTPF-PRFIPPNAYKFRPPLNPRFGPT 181
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.6 bits (46), Expect = 4.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 126 NMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPT 281
N P +GP I ++ P F H +TP PP++ P+ PT
Sbjct: 126 NFPPRPMGPWISIQEQIPRFRHIGPLTPF-PRFIPPNAYRFRPPLNPRFGPT 176
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 4.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 126 NMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPT 281
N PS +GP + ++ P F H TP PP++ P+ PT
Sbjct: 134 NFPSRPMGPWVPMQEQIPRFRHIGPSTPF-PRFIPPNAYKFRPPLNPRFGPT 184
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 4.9
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 126 NMPSGFLGPRIESIKKEPEFLHQPHITPVSTSHGPPDSINTITPVKSPHTPT 281
N P +GP I ++ P F H +TP PP++ P+ PT
Sbjct: 367 NFPPRPMGPWISIQEQIPRFRHIGPLTPF-PRFIPPNAYRFRPPLNPRFGPT 417
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.6 bits (46), Expect = 4.9
Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 6/99 (6%)
Frame = +3
Query: 249 ITPVKSPHTPTPIKSQ------PSHNGTPHGSHRSTTSPFSRHLTSPSQPRQISASPVQP 410
I P H P + Q P H P HRS+++ + S R + P +
Sbjct: 251 IEPTVQQHQPVTVNRQLNSDVQPGHGSPPVKQHRSSSASTT---CSGHTVRCFTGGPRKS 307
Query: 411 HTPVSHSXLNLMNPTPISIAATIPGPVMHSGQLVTHLHI 527
H L P +S + T P+ + + H+
Sbjct: 308 HESQCPMLQKLEKPV-LSSSTTTTSPMTSTKSTIVRNHL 345
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.2 bits (45), Expect = 6.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 144 LGPRIESIKKEPEFLHQPHITPVSTSHGPPDSIN 245
L P++ + P+FL QP I + DSIN
Sbjct: 12 LNPKLYDKHRAPKFLGQPTIVYFHVTVLSIDSIN 45
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 201 CGVDVKIPVPFLYFQFED 148
CG+ I VPF Y Q +D
Sbjct: 371 CGILGSILVPFFYVQEDD 388
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 6.5
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +3
Query: 24 TIGNSLRFWNEIENLVSSVENSSRPPSQPTNESTNMPSGFLGPRIESIKKEPEFLH 191
TI N+ + N + L ++ N + P N P +GP I ++ P F H
Sbjct: 322 TIHNNNNYKNYNKKLYYNIINIEQIPVPVPVYCGNFPPRPMGPWISIQEQIPRFRH 377
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,747
Number of Sequences: 438
Number of extensions: 4977
Number of successful extensions: 30
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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