Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_I19
         (818 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0613 + 26124714-26124857,26125692-26126330,26126455-261266...    32   0.63 
01_06_1513 - 37884198-37884485,37884966-37886951,37886976-378873...    30   2.5  
11_01_0058 + 438000-438230,438847-438902,440003-440117,440314-44...    28   7.8  

>03_05_0613 +
           26124714-26124857,26125692-26126330,26126455-26126695,
           26126913-26127496
          Length = 535

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = +1

Query: 67  RAFLKIWLSVITPRSIILLYMGLTILPATMENLILHFSQFEAERNRFVVRSPQQDSGLPV 246
           R   K W  ++  R ++LL     +LP  +  + L+F  F    + F  R P   +   +
Sbjct: 171 RCVCKPWRDLVDDRRLLLLLRAEELLPRPLAGIFLNF--FGLFNSEFFARRPSTGAAAAI 228

Query: 247 AGSLSVEP 270
           +G L   P
Sbjct: 229 SGDLDFLP 236


>01_06_1513 - 37884198-37884485,37884966-37886951,37886976-37887305,
            37887397-37887471,37887543-37887734,37887922-37888173,
            37888248-37888803,37888881-37889088,37889624-37889736,
            37890029-37890060,37890545-37890619
          Length = 1368

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/68 (29%), Positives = 32/68 (47%)
 Frame = +1

Query: 148  ATMENLILHFSQFEAERNRFVVRSPQQDSGLPVAGSLSVEPWXEMAHKYVQLXRWHGSIY 327
            +T E+L  H  Q EA    F +   Q+D  L     +  E   +   KY Q  +W+GS+ 
Sbjct: 1173 STYESLGEHRKQ-EAAFGHFQLACYQRDLCLRFLDLIDKEVKQKNEDKYRQKAKWYGSLA 1231

Query: 328  Q*SWEHGL 351
            + +W+  L
Sbjct: 1232 EKNWQRAL 1239


>11_01_0058 +
           438000-438230,438847-438902,440003-440117,440314-440424,
           442331-442518,442957-443013,443109-443268,443368-443436,
           443580-443699
          Length = 368

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 93  GDYPKEYNPAVHGPYDPARYYGKPDTPFQPV 185
           GD+   Y P     Y P  Y+G+P  P  P+
Sbjct: 15  GDHYPYYKPTSRPHYQPPHYHGQPAAPPAPL 45


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,044,942
Number of Sequences: 37544
Number of extensions: 345534
Number of successful extensions: 622
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)