Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_I19
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical pr...    38   0.009
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr...    31   0.75 
Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z81586-8|CAB04694.2|  305|Caenorhabditis elegans Hypothetical pr...    28   7.0  

>Z66515-4|CAA91350.1|  153|Caenorhabditis elegans Hypothetical
           protein R53.4 protein.
          Length = 153

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 17/31 (54%), Positives = 19/31 (61%)
 Frame = +3

Query: 93  GDYPKEYNPAVHGPYDPARYYGKPDTPFQPV 185
           G + K +N  VHGPY   RYYGK DT F  V
Sbjct: 47  GLFDKRWNKNVHGPYCHWRYYGKLDTKFMDV 77


>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical protein
            R03G5.3 protein.
          Length = 1311

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 9/141 (6%)
 Frame = +1

Query: 22   HYREXLKXWIFRKVHRAFLKI---WLS-VITPRSIILLYMGLTILPATMENLILH----- 174
            H R+  +   F++ + A++     WL+ ++TP S I + M L    +T   L +H     
Sbjct: 1163 HIRKSSRCHFFQQNNFAYVLFQMNWLTLIVTPVSGIAVKMILRKTYSTYNELAVHHNRLS 1222

Query: 175  FSQFEAERNRFVVRSPQQDSGLPVAGSLSVEPWXEMAHKYVQLXRWHGSIYQ*SWEHGLX 354
            F  F      F++       GL     L V PW E+  ++ +   W+G I    W + + 
Sbjct: 1223 FGLFLQALWNFIICG--YSDGLNQM-LLKVSPWLELVRQWEKFFYWYGGIMM-RWHYSML 1278

Query: 355  XALNXGXIXPPXTQIPLXTNL 417
              +    +     + P+ T +
Sbjct: 1279 IIIMIVYLRSTFVKFPIKTTI 1299


>Z69664-8|CAN86924.1| 1287|Caenorhabditis elegans Hypothetical
           protein K04D7.5b protein.
          Length = 1287

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 206 SWFGRRSKTPVCPWPXAFQSNPGW 277
           SW  + S TP+C WP A  S PGW
Sbjct: 596 SW--QESDTPICQWPPA--SQPGW 615


>Z69664-7|CAA93515.2| 1338|Caenorhabditis elegans Hypothetical
           protein K04D7.5a protein.
          Length = 1338

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 206 SWFGRRSKTPVCPWPXAFQSNPGW 277
           SW  + S TP+C WP A  S PGW
Sbjct: 596 SW--QESDTPICQWPPA--SQPGW 615


>Z81586-8|CAB04694.2|  305|Caenorhabditis elegans Hypothetical
           protein T05F1.10 protein.
          Length = 305

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = +1

Query: 46  WIFRKVHRAFLKIWLSVITPRSIILLYMGLTILPATMENLILHFSQFEAERNRF 207
           ++ +K+  A       ++TPR+  L++ G+ ILP   + ++  F        RF
Sbjct: 250 YVVQKIFEAIETEQEFLVTPRAFYLVFAGIQILPYKAQAMVAQFFGLVQNLERF 303


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,618,122
Number of Sequences: 27780
Number of extensions: 262010
Number of successful extensions: 519
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)